Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 7.9e-152 540.4 276 100.0
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 6.9e-39 165.2 250 44.0
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 6.5e-37 158.7 234 41.0
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 1.2e-35 154.5 217 44.2
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 1.2e-35 154.5 196 44.4
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.6e-35 154.1 197 43.1
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 2.1e-35 153.7 240 39.6
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 2.7e-35 153.3 211 43.1
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 3.6e-35 152.9 211 41.2
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 7.9e-35 151.8 219 42.9
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 7.9e-35 151.8 218 41.3
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 1.4e-34 151.0 230 42.2
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 2.3e-34 150.2 211 42.2
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 5.1e-34 149.1 228 41.2
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 5.1e-34 149.1 217 41.5
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 7.4e-33 145.2 211 42.7
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 7.4e-33 145.2 245 39.6
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 7.4e-33 145.2 241 38.6
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 1.3e-32 144.4 210 40.5
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 1.3e-32 144.4 212 41.0
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 2.8e-32 143.3 227 38.8
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 3.7e-32 142.9 234 39.3
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 3.7e-32 142.9 184 44.0
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 1.4e-31 141.0 198 42.4
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 1.8e-31 140.6 217 41.9
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.8e-31 140.6 238 39.1
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 1.8e-31 140.6 245 38.8
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 2.4e-31 140.2 221 40.7
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 2.4e-31 140.2 221 40.7
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 2.4e-31 140.2 209 43.5
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 2.4e-31 140.2 233 39.9
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 3.1e-31 139.8 239 37.2
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 3.1e-31 139.8 222 38.7
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 2.6e-30 136.7 196 40.3
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 2.9e-29 133.3 221 37.6
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 5.0e-29 132.5 210 38.1
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 8.5e-29 131.7 213 39.9
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 2.5e-28 130.2 227 37.0
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 4.2e-28 129.4 214 37.9
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 4.7e-27 125.9 205 37.1
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 3.0e-26 123.2 164 45.7
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 3.0e-26 123.2 226 37.6
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 5.2e-26 122.5 172 45.3
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 6.7e-26 122.1 142 50.0
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 6.7e-26 122.1 223 38.1
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 8.8e-26 121.7 144 50.0
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 8.8e-26 121.7 226 36.3
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 2.6e-25 120.2 208 37.0
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 3.3e-25 119.8 211 35.1
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 3.3e-25 119.8 128 52.3
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 4.4e-25 119.4 196 38.8
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 1.3e-24 117.9 124 51.6
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.8e-24 116.7 220 37.3
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.1e-23 114.8 220 36.8
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 3.1e-23 113.2 220 36.4
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 9.1e-23 111.7 219 37.4
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 3.5e-22 109.8 201 36.8
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 4.5e-22 109.4 217 33.2
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 1.0e-21 108.2 182 39.0
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 2.9e-21 106.7 238 36.1
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 2.9e-21 106.7 201 35.8
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 2.9e-21 106.7 198 36.9
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 1.1e-20 104.8 209 33.5
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 3.2e-20 103.2 155 42.6
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 7.2e-20 102.1 229 33.6
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 1.2e-19 101.3 139 43.2
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 3.6e-19 99.8 137 45.3
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 6.1e-19 99.0 202 37.1
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 8.0e-19 98.6 181 36.5
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 2.3e-18 97.1 213 34.3
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 2.0e-17 94.0 133 42.9
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 3.3e-17 93.2 104 50.0
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 3.7e-16 89.7 131 42.7
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 9.1e-15 85.1 192 32.8
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 3.5e-14 83.2 136 40.4
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 1.0e-13 81.6 189 33.9
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 1.3e-13 81.3 231 31.2
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 2.2e-13 80.5 314 26.8
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.1e-11 73.9 119 37.8
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 2.3e-10 70.5 113 38.9
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 6.8e-10 68.9 146 37.0
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 2.6e-09 67.0 142 33.1
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 4.4e-09 66.2 119 37.8
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 2.8e-08 63.5 140 35.0
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 3.7e-08 63.2 86 40.7
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 1.1e-07 61.6 95 40.0
Thecc.06G150600 Theobroma cacao HOM05D008587 ORTHO05D010485 1.8e-07 60.8 109 33.9
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 2.4e-07 60.5 150 33.3
QL05p058149 Quercus lobata HOM05D008587 ORTHO05D010485 2.4e-07 60.5 144 31.2
FAN11G1722 Fragaria x ananassa HOM05D014465 ORTHO05D010485 5.4e-07 59.3 102 37.3
FvH4_3g05550 Fragaria vesca HOM05D014465 ORTHO05D010485 9.1e-07 58.5 114 35.1
FAN16G1258 Fragaria x ananassa HOM05D014465 ORTHO05D010485 1.2e-06 58.2 135 31.9
THA.LOC104814298 Tarenaya hassleriana HOM05D008587 ORTHO05D010485 2.0e-06 57.4 140 32.1
BcaC02g11516 Brassica carinata HOM05D008587 ORTHO05D010485 2.7e-06 57.0 134 35.1
C04p14490 Brassica napus HOM05D008587 ORTHO05D010485 2.7e-06 57.0 134 35.1
BolC4t23032H Brassica oleracea HOM05D008587 ORTHO05D010485 2.7e-06 57.0 134 35.1
BcaB02g09532 Brassica carinata HOM05D008587 ORTHO05D010485 3.5e-06 56.6 122 37.7
Thhalv10017034m.g Eutrema salsugineum HOM05D008587 ORTHO05D010485 3.5e-06 56.6 122 38.5
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 4.5e-06 56.2 122 38.5
AT2G34540 Arabidopsis thaliana HOM05D008587 ORTHO05D010485 4.5e-06 56.2 122 37.7


User provided reference genes

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