Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 3.1e-142 508.4 258 100.0
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 2.9e-55 219.5 230 53.5
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 4.9e-55 218.8 228 53.5
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 6.5e-55 218.4 230 53.5
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 2.5e-54 216.5 256 48.0
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 7.1e-54 214.9 235 53.2
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 9.3e-54 214.5 235 52.3
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.2e-53 214.2 274 47.8
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 1.2e-53 214.2 253 49.4
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.2e-53 214.2 235 51.9
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 1.6e-53 213.8 239 53.1
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.6e-53 213.8 235 52.3
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 3.5e-53 212.6 240 50.4
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 6.0e-53 211.8 274 47.1
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 7.9e-53 211.5 243 50.6
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 7.9e-53 211.5 243 50.6
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.3e-52 210.7 234 51.3
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 1.8e-52 210.3 235 51.9
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 3.0e-52 209.5 239 49.8
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 3.0e-52 209.5 251 46.6
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 3.0e-52 209.5 234 50.0
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 6.7e-52 208.4 269 46.5
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 8.7e-52 208.0 245 49.0
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 1.1e-51 207.6 236 50.4
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.1e-51 207.6 236 51.7
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 1.9e-51 206.8 228 49.1
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 2.5e-51 206.5 235 49.8
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 2.5e-51 206.5 258 46.9
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 4.3e-51 205.7 228 49.6
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 5.7e-51 205.3 274 47.4
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 7.4e-51 204.9 249 49.4
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 9.6e-51 204.5 235 50.2
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.3e-50 204.1 228 50.0
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.3e-50 204.1 257 45.9
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.8e-50 203.0 235 49.4
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 4.8e-50 202.2 255 45.9
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 6.3e-50 201.8 249 47.4
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 8.2e-50 201.4 230 51.7
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.4e-49 200.7 230 52.6
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.8e-49 200.3 246 48.0
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.8e-49 200.3 273 46.2
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 2.4e-49 199.9 223 51.1
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 5.3e-49 198.7 212 49.5
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 9.0e-49 198.0 272 43.8
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 9.0e-49 198.0 239 51.0
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 2.0e-48 196.8 225 51.1
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 2.6e-48 196.4 234 49.1
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 3.4e-48 196.1 235 49.8
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 3.4e-48 196.1 235 48.5
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 5.9e-48 195.3 234 49.6
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 1.0e-47 194.5 234 49.1
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.3e-47 194.1 234 47.9
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 1.7e-47 193.7 235 47.7
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 3.8e-47 192.6 232 47.0
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 3.8e-47 192.6 232 47.0
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 3.8e-47 192.6 247 48.6
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 6.5e-47 191.8 232 46.6
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 6.5e-47 191.8 232 47.0
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 1.1e-46 191.0 248 50.0
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.4e-46 190.7 241 49.0
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 1.4e-46 190.7 241 49.0
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.4e-46 190.7 234 46.6
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 1.9e-46 190.3 253 43.5
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 4.2e-46 189.1 233 45.5
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 5.5e-46 188.7 240 49.6
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 7.2e-46 188.3 250 42.4
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 1.6e-45 187.2 240 45.4
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 7.9e-45 184.9 239 46.4
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 7.9e-45 184.9 236 47.0
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 7.9e-45 184.9 236 47.0
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 1.3e-44 184.1 239 47.7
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 1.8e-44 183.7 269 43.5
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 3.9e-44 182.6 238 46.6
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 3.9e-44 182.6 238 46.6
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 7.4e-43 178.3 267 41.2
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.8e-42 175.6 242 45.5
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 6.3e-42 175.3 238 44.1
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 8.2e-42 174.9 234 44.4
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 2.4e-41 173.3 241 43.2
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 3.1e-41 172.9 226 47.3
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 4.1e-41 172.6 242 44.2
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 4.1e-41 172.6 241 42.3
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 2.6e-40 169.9 245 42.4
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 3.4e-40 169.5 230 44.8
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 7.7e-40 168.3 269 40.9
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 2.9e-39 166.4 257 43.2
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 4.2e-38 162.5 181 51.4
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 7.2e-38 161.8 243 43.2
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 2.7e-37 159.8 253 40.3
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 6.1e-37 158.7 181 49.7
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 1.0e-36 157.9 241 43.2
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 1.4e-36 157.5 245 44.5
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 1.4e-36 157.5 245 44.5
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.8e-36 157.1 237 45.6
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 1.5e-35 154.1 232 45.7
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.5e-35 154.1 235 41.3
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.3e-34 151.0 232 39.7
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 4.1e-33 146.0 232 42.7
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 5.3e-33 145.6 240 41.2
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 1.4e-30 137.5 230 40.4
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 4.2e-30 136.0 241 40.7
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 4.2e-30 136.0 257 37.4
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 1.8e-28 130.6 232 37.5
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 2.3e-28 130.2 234 35.5
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.5e-27 127.5 156 47.4
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 9.7e-27 124.8 234 36.8
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 1.7e-26 124.0 230 37.8
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 2.5e-22 110.2 216 35.6
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.0e-20 104.8 145 40.7
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 4.0e-20 102.8 233 31.8
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 8.8e-20 101.7 166 38.6
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 1.1e-19 101.3 166 38.0
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 2.4e-17 93.6 250 30.4
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 1.3e-15 87.8 98 52.0
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 8.5e-15 85.1 89 53.9
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.0e-12 76.3 90 47.8
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 5.2e-12 75.9 89 49.4
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 4.4e-11 72.8 174 31.6
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 2.8e-10 70.1 106 36.8
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.0e-07 61.6 50 54.0


User provided reference genes

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