Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 4.1e-255 884.4 506 100.0
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 3.4e-140 502.7 468 57.7
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 3.7e-139 499.2 488 58.6
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 6.3e-139 498.4 472 58.9
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 2.4e-138 496.5 475 59.2
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 3.1e-138 496.1 476 59.0
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 3.8e-136 489.2 472 56.8
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.9e-135 486.9 471 59.4
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 3.3e-135 486.1 476 58.8
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 1.6e-134 483.8 475 58.1
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 3.6e-134 482.6 472 56.8
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 6.1e-134 481.9 472 58.1
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 2.6e-132 476.5 461 58.1
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 2.6e-132 476.5 482 56.2
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 5.7e-132 475.3 474 57.0
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 5.7e-132 475.3 474 57.0
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 7.5e-132 474.9 461 58.6
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 1.7e-131 473.8 476 58.0
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 2.2e-131 473.4 467 55.2
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 7.0e-130 468.4 471 57.7
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 1.6e-129 467.2 473 57.3
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 2.7e-129 466.5 474 55.5
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 2.3e-128 463.4 468 57.1
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 3.9e-128 462.6 472 54.7
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 5.0e-128 462.2 473 56.2
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 3.3e-127 459.5 482 55.2
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 5.6e-127 458.8 476 54.4
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 9.5e-127 458.0 474 57.0
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 3.6e-126 456.1 465 54.6
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 6.2e-126 455.3 469 53.7
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 2.3e-125 453.4 406 59.9
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 2.3e-125 453.4 453 56.3
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 3.1e-125 453.0 472 54.7
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 8.9e-125 451.4 475 54.1
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.2e-124 451.1 472 52.8
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 2.0e-124 450.3 476 55.0
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 3.4e-124 449.5 476 55.5
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 1.7e-123 447.2 474 54.2
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.7e-123 447.2 467 51.4
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 1.7e-123 447.2 468 55.1
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.2e-123 446.8 458 57.4
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 2.9e-123 446.4 473 55.4
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 4.9e-123 445.7 475 53.9
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 6.4e-123 445.3 502 52.6
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 6.4e-123 445.3 502 52.6
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 8.3e-123 444.9 478 52.9
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.1e-122 444.5 471 52.7
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 1.4e-122 444.1 406 58.4
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 2.4e-122 443.4 410 59.5
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 3.2e-122 443.0 470 56.0
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 3.2e-122 443.0 468 53.2
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 5.4e-122 442.2 470 56.0
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 5.4e-122 442.2 478 52.5
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 7.0e-122 441.8 468 53.8
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 1.2e-121 441.0 478 54.2
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.6e-121 440.7 464 53.0
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 2.0e-121 440.3 474 53.4
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 2.0e-121 440.3 474 53.4
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 3.5e-121 439.5 497 51.9
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.3e-120 437.6 469 53.7
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 5.0e-120 435.6 468 53.2
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 6.6e-120 435.3 471 54.6
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 4.7e-118 429.1 470 51.3
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 4.7e-118 429.1 475 52.6
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 6.2e-118 428.7 476 52.3
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 8.1e-118 428.3 494 51.2
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 4.0e-117 426.0 475 52.6
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 1.2e-116 424.5 408 57.6
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.5e-116 424.1 445 53.9
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 3.4e-116 422.9 452 54.2
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 1.3e-115 421.0 475 51.8
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 8.3e-115 418.3 470 52.3
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 8.3e-115 418.3 428 55.6
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 1.1e-114 417.9 476 51.7
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.4e-114 417.5 404 57.4
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 2.4e-114 416.8 475 52.6
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 2.4e-114 416.8 558 47.1
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.2e-114 416.4 408 54.9
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.1e-114 416.0 404 57.9
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 5.4e-114 415.6 468 51.9
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 9.2e-114 414.8 474 51.1
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 1.2e-113 414.5 471 50.7
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 2.1e-113 413.7 489 51.7
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.1e-113 413.7 478 52.7
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 3.5e-113 412.9 474 51.3
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 3.5e-113 412.9 473 50.7
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 7.8e-113 411.8 475 52.0
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 1.0e-112 411.4 485 51.8
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.3e-112 411.0 474 51.7
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 1.7e-112 410.6 490 50.2
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.5e-111 406.8 463 51.4
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 3.3e-111 406.4 467 49.9
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 5.6e-111 405.6 386 55.2
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 9.5e-111 404.8 483 49.7
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 9.5e-111 404.8 483 49.7
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 1.2e-110 404.4 479 50.5
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 1.8e-109 400.6 467 50.3
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 1.2e-108 397.9 501 49.5
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 2.6e-108 396.7 380 57.4
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 8.4e-107 391.7 475 50.7
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 5.4e-106 389.0 391 56.8
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 2.7e-105 386.7 402 54.0
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 2.5e-103 380.2 363 55.9
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 1.8e-101 374.0 490 45.9
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 8.9e-101 371.7 398 54.3
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 1.2e-100 371.3 386 51.6
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 4.4e-100 369.4 390 51.8
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 1.9e-98 364.0 407 51.1
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 1.1e-95 354.8 424 47.9
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 6.2e-94 349.0 328 57.0
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.6e-89 334.3 334 57.8
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 7.9e-89 332.0 475 46.1
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 1.6e-86 324.3 397 49.6
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 2.1e-86 323.9 493 40.8
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 9.9e-84 315.1 531 39.5
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 2.9e-83 313.5 470 39.6
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.0e-80 305.1 290 54.5
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 1.2e-73 281.6 498 41.4
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.1e-73 280.8 309 53.7
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 4.3e-71 273.1 276 54.0
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 5.7e-71 272.7 276 54.0
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 3.0e-64 250.4 272 57.0
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 1.5e-60 238.0 306 47.1
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 6.5e-59 232.6 228 52.2
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.6e-57 228.0 339 46.9
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 3.1e-53 213.8 578 33.9
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 2.6e-44 184.1 172 55.8
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 7.2e-42 176.0 315 41.9
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 2.0e-39 167.9 156 58.3
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 1.8e-37 161.4 470 31.1
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 2.4e-37 161.0 184 59.8
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 3.6e-33 147.1 157 50.3
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 6.3e-30 136.3 141 53.2
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 4.1e-21 107.1 101 56.4
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 1.6e-20 105.1 101 58.4
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 1.6e-20 105.1 101 58.4
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 7.8e-20 102.8 148 50.7
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 7.3e-18 96.3 120 50.0
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.6e-17 95.1 163 42.9
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.8e-16 91.7 126 43.7
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 1.0e-11 75.9 106 40.6
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.3e-11 75.5 88 54.5
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 6.6e-11 73.2 201 33.8
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 1.9e-10 71.6 97 45.4
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 7.3e-10 69.7 55 54.5
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 8.0e-09 66.2 105 48.6
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 4.0e-08 63.9 66 53.0
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 1.7e-06 58.5 60 50.0


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