Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019901 Vanilla planifolia HOM05D000110 ORTHO05D428486 6.8e-126 454.1 250 100.0
Zm00001eb253280 Zea mays HOM05D000110 ORTHO05D000024 4.7e-10 69.3 69 50.7
Os02g0726300 Oryza sativa ssp. japonica HOM05D000110 ORTHO05D000024 8.0e-10 68.6 67 52.2
Zm00001eb189510 Zea mays HOM05D000110 ORTHO05D000024 1.5e-08 64.3 67 47.8
Aqoxy3G03753 Aquilegia oxysepala HOM05D000110 ORTHO05D000024 2.6e-08 63.5 67 55.2
MBI15_g04999_MAGBIO Magnolia biondii HOM05D000110 ORTHO05D000024 2.6e-08 63.5 67 49.3
TAR374G1325 Trochodendron aralioides HOM05D000110 ORTHO05D000024 3.4e-08 63.2 293 31.7
Gohir.D09G244700 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.7e-07 60.8 67 55.2
Gorai.006G268800 Gossypium raimondii HOM05D000110 ORTHO05D000024 1.7e-07 60.8 67 55.2
CANSAT80G0082 Cannabis sativa HOM05D000110 ORTHO05D000024 3.7e-07 59.7 67 53.7
Nn4g23542 Nelumbo nucifera HOM05D000110 ORTHO05D000024 3.7e-07 59.7 67 50.7
Zm00001eb012440 Zea mays HOM05D000110 ORTHO05D000024 3.7e-07 59.7 26 88.5
Gohir.A09G243950 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.9e-07 59.3 67 53.7
Ciclev10021100m.g Citrus clementina HOM05D000110 ORTHO05D000024 6.3e-07 58.9 70 51.4
PSO063G0355 Papaver somniferum HOM05D000110 ORTHO05D000024 6.3e-07 58.9 48 60.4
PSO782G1997 Papaver somniferum HOM05D000110 ORTHO05D000024 6.3e-07 58.9 48 60.4
GSVIVG01008156001 Vitis vinifera HOM05D000110 ORTHO05D000024 6.3e-07 58.9 67 49.3
BcaC07g41982 Brassica carinata HOM05D000110 ORTHO05D000024 1.1e-06 58.2 46 63.0
C08p50420 Brassica napus HOM05D000110 ORTHO05D000024 1.1e-06 58.2 46 63.0
Gohir.A11G034200 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.1e-06 58.2 67 55.2
MD06G1205900 Malus domestica HOM05D000110 ORTHO05D000024 1.1e-06 58.2 70 51.4
Lj4g0010871 Lotus japonicus HOM05D000110 ORTHO05D000024 1.8e-06 57.4 266 32.7
A09p09090 Brassica napus HOM05D000110 ORTHO05D000024 2.4e-06 57.0 47 59.6
CiPaw.14G069800 Carya illinoinensis HOM05D000110 ORTHO05D000024 2.4e-06 57.0 51 52.9
CiPaw.15G114200 Carya illinoinensis HOM05D000110 ORTHO05D000024 2.4e-06 57.0 67 49.3
Os05g0112200 Oryza sativa ssp. japonica HOM05D000110 ORTHO05D000024 2.4e-06 57.0 56 44.6
VMungo1215G0233 Vigna mungo HOM05D000110 ORTHO05D000024 2.4e-06 57.0 257 31.5
Zm00001eb397630 Zea mays HOM05D000110 ORTHO05D000024 2.4e-06 57.0 26 84.6
A09p66250 Brassica napus HOM05D000110 ORTHO05D000024 3.1e-06 56.6 46 60.9
BraA09t41963Z Brassica rapa HOM05D000110 ORTHO05D000024 3.1e-06 56.6 46 60.9
CANSAT54G0835 Cannabis sativa HOM05D000110 ORTHO05D000024 3.1e-06 56.6 48 50.0
AUR62018002 Chenopodium quinoa HOM05D000110 ORTHO05D000024 3.1e-06 56.6 26 84.6
ClCG10G021050 Citrullus lanatus HOM05D000110 ORTHO05D000024 3.1e-06 56.6 49 55.1
HanXRQChr08g0220421 Helianthus annuus HOM05D000110 ORTHO05D000024 3.1e-06 56.6 46 54.3
MD14G1216800 Malus domestica HOM05D000110 ORTHO05D000024 3.1e-06 56.6 70 50.0
Sabra16G0143700 Salix brachista HOM05D000110 ORTHO05D000024 3.1e-06 56.6 49 53.1
Sed0018269 Sechium edule HOM05D000110 ORTHO05D000024 3.1e-06 56.6 49 55.1
SEGI_20254 Sequoiadendron giganteum HOM05D000110 ORTHO05D000024 3.1e-06 56.6 28 78.6
ATR0691G319 Amborella trichopoda HOM05D000110 ORTHO05D000024 4.1e-06 56.2 26 80.8
Dinv38640 Davidia involucrata HOM05D000110 ORTHO05D000024 4.1e-06 56.2 70 48.6
ECA246G1905 Erigeron canadensis HOM05D000110 ORTHO05D000024 4.1e-06 56.2 69 50.7
Migut.H00486 Erythranthe guttata HOM05D000110 ORTHO05D000024 4.1e-06 56.2 44 61.4
Oeu012259.1 Olea europaea HOM05D000110 ORTHO05D000024 4.1e-06 56.2 33 75.8
Solyc06g150130.1 Solanum lycopersicum HOM05D000110 ORTHO05D000024 4.1e-06 56.2 67 49.3
TWI60G0784 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 4.1e-06 56.2 67 50.7
Zm00001eb355710 Zea mays HOM05D000110 ORTHO05D000024 4.1e-06 56.2 52 46.2
BraA09t36561Z Brassica rapa HOM05D000110 ORTHO05D000024 5.4e-06 55.8 47 59.6
CsaV3_3G034960 Cucumis sativus L. HOM05D000110 ORTHO05D000024 5.4e-06 55.8 49 55.1
Thhalv10008140m.g Eutrema salsugineum HOM05D000110 ORTHO05D000024 5.4e-06 55.8 46 60.9
Gohir.A05G301500 Gossypium hirsutum HOM05D000110 ORTHO05D000024 5.4e-06 55.8 51 52.9
HanXRQChr06g0168561 Helianthus annuus HOM05D000110 ORTHO05D000024 5.4e-06 55.8 23 95.7
Hma1.2p1_0260F.1_g104550 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 5.4e-06 55.8 30 80.0
MD04G1126500 Malus domestica HOM05D000110 ORTHO05D000024 5.4e-06 55.8 51 54.9
Peaxi162Scf00165g01722 Petunia axillaris HOM05D000110 ORTHO05D000024 5.4e-06 55.8 49 55.1
Phvul.003G182100 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 5.4e-06 55.8 289 29.1
Psat7g217400 Pisum sativum HOM05D000110 ORTHO05D000024 5.4e-06 55.8 55 52.7
Potri.006G084200 Populus trichocarpa HOM05D000110 ORTHO05D000024 5.4e-06 55.8 54 55.6
Prupe.6G253300 Prunus persica HOM05D000110 ORTHO05D000024 5.4e-06 55.8 51 54.9
TAR622G1137 Trochodendron aralioides HOM05D000110 ORTHO05D000024 5.4e-06 55.8 285 32.6
Actinidia18972 Actinidia chinensis HOM05D000110 ORTHO05D000024 7.0e-06 55.5 71 46.5
BolC9t60144H Brassica oleracea HOM05D000110 ORTHO05D000024 7.0e-06 55.5 56 51.8
MELO3C009265.2 Cucumis melo HOM05D000110 ORTHO05D000024 7.0e-06 55.5 49 53.1
Glyma.13G329000 Glycine max HOM05D000110 ORTHO05D000024 7.0e-06 55.5 26 80.8
Potri.001G238400 Populus trichocarpa HOM05D000110 ORTHO05D000024 7.0e-06 55.5 49 53.1
Sed0020179 Sechium edule HOM05D000110 ORTHO05D000024 7.0e-06 55.5 72 50.0
SEGI_13040 Sequoiadendron giganteum HOM05D000110 ORTHO05D000024 7.0e-06 55.5 26 84.6
SEGI_34605 Sequoiadendron giganteum HOM05D000110 ORTHO05D000024 7.0e-06 55.5 26 84.6
Ah.02g123420 Amaranthus hybridus HOM05D000110 ORTHO05D000024 9.2e-06 55.1 42 59.5
ATR0225G023 Amborella trichopoda HOM05D000110 ORTHO05D000024 9.2e-06 55.1 44 56.8
FAN11G2714 Fragaria x ananassa HOM05D000110 ORTHO05D000024 9.2e-06 55.1 52 50.0
FAN16G2478 Fragaria x ananassa HOM05D000110 ORTHO05D000024 9.2e-06 55.1 52 50.0
FAN21G1269 Fragaria x ananassa HOM05D000110 ORTHO05D000024 9.2e-06 55.1 52 50.0
Gohir.D05G301150 Gossypium hirsutum HOM05D000110 ORTHO05D000024 9.2e-06 55.1 26 80.8
Gorai.009G319300 Gossypium raimondii HOM05D000110 ORTHO05D000024 9.2e-06 55.1 26 80.8
MD07G1197500 Malus domestica HOM05D000110 ORTHO05D000024 9.2e-06 55.1 30 73.3
PGR102G2245 Punica granatum HOM05D000110 ORTHO05D000024 9.2e-06 55.1 32 71.9
Sabra06G0063900 Salix brachista HOM05D000110 ORTHO05D000024 9.2e-06 55.1 49 53.1
PGSC0003DMG400029729 Solanum tuberosum HOM05D000110 ORTHO05D000024 9.2e-06 55.1 24 87.5
unitig_21.g21035 Utricularia gibba HOM05D000110 ORTHO05D000024 9.2e-06 55.1 30 70.0


User provided reference genes

Program Settings