Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.1e-70 268.9 133 100.0
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 4.8e-30 134.8 104 64.4
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 8.3e-30 134.0 104 67.3
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 3.1e-29 132.1 104 66.3
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 3.1e-29 132.1 104 66.3
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 3.1e-29 132.1 104 66.3
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 9.1e-29 130.6 104 63.5
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 1.2e-28 130.2 104 63.5
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 2.0e-28 129.4 104 63.5
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 2.0e-28 129.4 104 63.5
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.7e-28 129.0 104 63.5
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 3.5e-28 128.6 104 62.5
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 3.5e-28 128.6 104 63.5
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 3.5e-28 128.6 104 62.5
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 4.5e-28 128.3 104 63.5
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 4.5e-28 128.3 104 62.5
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 5.9e-28 127.9 104 63.5
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 5.9e-28 127.9 104 64.4
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 1.0e-27 127.1 104 62.5
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 1.0e-27 127.1 104 61.5
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 1.0e-27 127.1 104 62.5
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 1.3e-27 126.7 104 62.5
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 1.7e-27 126.3 104 62.5
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 1.7e-27 126.3 104 62.5
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 1.7e-27 126.3 104 62.5
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 2.2e-27 125.9 104 62.5
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 2.2e-27 125.9 104 62.5
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.9e-27 125.6 104 62.5
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 2.9e-27 125.6 104 63.5
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 3.8e-27 125.2 104 61.5
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 3.8e-27 125.2 104 62.5
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 3.8e-27 125.2 104 60.6
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 5.0e-27 124.8 104 62.5
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 5.0e-27 124.8 104 59.6
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 6.5e-27 124.4 104 61.5
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 6.5e-27 124.4 104 62.5
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 6.5e-27 124.4 104 62.5
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 6.5e-27 124.4 104 62.5
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 6.5e-27 124.4 104 61.5
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 8.5e-27 124.0 104 61.5
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 8.5e-27 124.0 104 61.5
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 8.5e-27 124.0 104 61.5
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 8.5e-27 124.0 104 61.5
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 8.5e-27 124.0 104 60.6
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 8.5e-27 124.0 104 64.4
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 8.5e-27 124.0 104 62.5
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 1.1e-26 123.6 104 60.6
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 1.1e-26 123.6 124 54.0
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 1.1e-26 123.6 104 60.6
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 1.5e-26 123.2 104 63.5
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 1.5e-26 123.2 104 61.5
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 1.5e-26 123.2 104 59.6
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 1.9e-26 122.9 104 61.5
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 1.9e-26 122.9 104 60.6
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 1.9e-26 122.9 104 60.6
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 1.9e-26 122.9 104 60.6
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 1.9e-26 122.9 104 60.6
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 1.9e-26 122.9 104 60.6
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 1.9e-26 122.9 104 60.6
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 1.9e-26 122.9 104 60.6
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 2.5e-26 122.5 104 60.6
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 2.5e-26 122.5 104 61.5
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 2.5e-26 122.5 104 60.6
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 2.5e-26 122.5 104 60.6
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 2.5e-26 122.5 104 60.6
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 2.5e-26 122.5 104 60.6
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 2.5e-26 122.5 104 60.6
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 3.2e-26 122.1 104 59.6
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 3.2e-26 122.1 104 59.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 3.2e-26 122.1 104 59.6
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 3.2e-26 122.1 104 59.6
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 3.2e-26 122.1 104 60.6
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 4.2e-26 121.7 104 60.6
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 5.5e-26 121.3 104 60.6
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 5.5e-26 121.3 104 59.6
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 5.5e-26 121.3 104 59.6
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 5.5e-26 121.3 104 59.6
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 7.2e-26 120.9 104 58.7
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 7.2e-26 120.9 104 59.6
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 7.2e-26 120.9 104 61.5
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 7.2e-26 120.9 104 59.6
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 9.4e-26 120.6 104 59.6
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 9.4e-26 120.6 104 58.7
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 9.4e-26 120.6 104 58.7
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 9.4e-26 120.6 104 59.6
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 1.2e-25 120.2 103 59.2
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.2e-25 120.2 107 59.8
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 1.6e-25 119.8 104 59.6
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 1.6e-25 119.8 104 58.7
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 1.6e-25 119.8 104 58.7
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 1.6e-25 119.8 100 61.0
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 2.1e-25 119.4 104 58.7
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 2.7e-25 119.0 104 58.7
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.6e-25 118.6 105 57.1
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 4.7e-25 118.2 104 58.7
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 6.1e-25 117.9 104 60.6
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 8.0e-25 117.5 104 58.7
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 8.0e-25 117.5 104 58.7
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 8.0e-25 117.5 104 58.7
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 8.0e-25 117.5 104 58.7
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 8.0e-25 117.5 104 57.7
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 2.3e-24 115.9 104 58.7
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 5.2e-24 114.8 104 56.7
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.2e-23 113.6 104 59.6
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 5.7e-23 111.3 104 58.7
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 1.3e-22 110.2 99 57.6
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 3.7e-22 108.6 108 54.6
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 6.3e-22 107.8 100 56.0
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 1.1e-21 107.1 68 72.1
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 1.8e-21 106.3 97 57.7
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 4.1e-21 105.1 97 58.8
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 2.8e-17 92.4 111 49.5
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-16 89.4 96 52.1
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 1.1e-13 80.5 102 50.0
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.1e-13 78.6 70 60.0
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 7.0e-13 77.8 70 58.6
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.3e-11 72.8 110 42.7


User provided reference genes

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