Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 4.7e-191 671.4 440 100.0
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 4.7e-29 133.3 116 55.2
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 2.3e-28 131.0 198 40.4
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 4.4e-27 126.7 196 38.3
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.7e-26 124.8 179 41.3
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 2.2e-26 124.4 282 59.2
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 4.1e-25 120.2 173 41.0
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 4.1e-25 120.2 173 41.0
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 5.3e-25 119.8 173 39.9
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 7.0e-25 119.4 173 41.6
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 9.1e-25 119.0 174 42.0
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 1.6e-24 118.2 172 39.5
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 1.5e-22 111.7 208 33.7
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 4.2e-22 110.2 163 38.7
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 5.5e-22 109.8 199 34.7
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 1.0e-20 105.5 160 37.5
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 1.0e-20 105.5 186 36.0
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 5.2e-20 103.2 173 36.4
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 5.2e-20 103.2 177 36.2
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 5.2e-20 103.2 180 35.6
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 6.7e-20 102.8 147 40.8
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 8.8e-20 102.4 182 36.8
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 1.5e-19 101.7 126 42.1
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.5e-19 101.7 180 34.4
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 1.5e-19 101.7 180 36.1
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 2.0e-19 101.3 176 38.6
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 2.6e-19 100.9 188 35.6
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 2.6e-19 100.9 180 33.9
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 3.3e-19 100.5 139 41.7
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 5.7e-19 99.8 174 33.3
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 7.5e-19 99.4 180 34.4
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 1.3e-18 98.6 191 32.5
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 3.7e-18 97.1 173 34.1
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 4.8e-18 96.7 171 36.3
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 1.1e-17 95.5 180 33.3
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 1.8e-17 94.7 188 35.6
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 2.4e-17 94.4 163 33.7
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 2.4e-17 94.4 165 33.9
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 4.1e-17 93.6 150 36.0
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 9.1e-17 92.4 173 35.3
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 1.2e-16 92.0 173 34.1
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 2.0e-16 91.3 174 35.1
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 2.0e-16 91.3 172 36.0
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 2.0e-16 91.3 190 31.6
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 2.0e-16 91.3 182 31.9
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 2.7e-16 90.9 190 31.6
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 4.5e-16 90.1 189 31.2
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 7.7e-16 89.4 190 31.1
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.0e-15 89.0 151 34.4
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 1.3e-15 88.6 158 38.0
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 2.2e-15 87.8 158 33.5
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 5.0e-15 86.7 136 38.2
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 8.5e-15 85.9 157 33.8
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 8.5e-15 85.9 171 35.7
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 1.9e-14 84.7 174 34.5
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 5.5e-14 83.2 124 40.3
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 7.2e-14 82.8 159 35.2
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 1.2e-13 82.0 165 32.1
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 4.7e-13 80.1 169 29.0
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 4.7e-13 80.1 174 31.0
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 4.7e-13 80.1 174 31.0
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 1.0e-12 79.0 151 37.1
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 1.4e-12 78.6 192 30.2
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 5.2e-12 76.6 161 30.4
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 6.8e-12 76.3 149 30.9
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 1.5e-11 75.1 216 27.3
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 1.5e-11 75.1 157 33.1
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 1.5e-11 75.1 108 39.8
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 2.0e-11 74.7 190 28.9
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 4.4e-11 73.6 204 27.5
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 7.5e-11 72.8 180 29.4
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 7.5e-11 72.8 161 29.2
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 9.8e-11 72.4 137 32.1
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 9.8e-11 72.4 117 36.8
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 2.8e-10 70.9 125 35.2
COL.COLO4_13684 Corchorus olitorius HOM05D044539 ORTHO05D027017 3.7e-10 70.5 64 56.2
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 4.8e-10 70.1 140 34.3
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 4.8e-10 70.1 179 29.1
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 1.4e-09 68.6 125 32.8
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 1.4e-09 68.6 125 32.8
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 4.1e-09 67.0 215 27.4
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 5.4e-09 66.6 125 31.2
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 7.0e-09 66.2 161 33.5
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 7.0e-09 66.2 158 31.6
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 9.1e-09 65.9 125 32.0
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 9.1e-09 65.9 224 25.9
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 2.0e-08 64.7 200 29.0
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 3.5e-08 63.9 201 30.8
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 6.5e-07 59.7 96 34.4
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 2.5e-06 57.8 125 31.2
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 3.2e-06 57.4 123 29.3


User provided reference genes

Program Settings