Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.7e-224 782.3 387 100.0
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 6.1e-150 534.6 422 70.9
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 4.3e-63 246.1 511 34.6
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 2.2e-59 233.8 507 32.3
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 2.9e-59 233.4 514 34.2
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 5.0e-59 232.6 507 33.3
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 1.6e-57 227.6 526 33.1
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 3.6e-57 226.5 514 33.1
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 7.9e-57 225.3 520 32.7
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.1e-55 221.5 500 31.8
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 2.0e-55 220.7 496 31.2
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 4.3e-55 219.5 510 31.4
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 5.7e-55 219.2 503 31.2
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 5.7e-55 219.2 512 31.6
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 9.7e-55 218.4 527 30.9
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 9.7e-55 218.4 511 31.9
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 1.3e-54 218.0 500 33.6
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 2.2e-54 217.2 524 32.1
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 2.2e-54 217.2 503 30.6
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 1.1e-53 214.9 513 31.4
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 1.4e-53 214.5 463 32.6
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 3.1e-53 213.4 401 35.2
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 6.9e-53 212.2 517 30.0
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 2.6e-52 210.3 525 32.2
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 4.5e-52 209.5 510 29.8
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 1.0e-51 208.4 509 29.9
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.0e-51 208.4 499 30.9
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 1.0e-51 208.4 520 31.5
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 1.3e-51 208.0 511 31.1
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 2.9e-51 206.8 439 34.4
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 8.5e-51 205.3 477 30.8
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 2.5e-50 203.8 509 30.6
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 7.2e-50 202.2 517 31.3
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 9.4e-50 201.8 522 32.0
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 1.2e-49 201.4 509 29.5
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 1.6e-49 201.1 529 31.6
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 2.7e-49 200.3 511 30.9
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 3.6e-49 199.9 454 31.5
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 7.9e-49 198.7 515 29.7
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 3.0e-48 196.8 509 29.3
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 3.0e-48 196.8 478 31.2
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 3.9e-48 196.4 514 29.8
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 6.7e-48 195.7 527 29.8
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 2.0e-47 194.1 509 29.1
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 5.7e-47 192.6 522 29.9
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 5.7e-47 192.6 516 30.6
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 1.7e-46 191.0 502 28.5
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 1.7e-46 191.0 511 31.5
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 3.7e-46 189.9 510 29.8
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.1e-45 188.3 533 30.4
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 3.1e-45 186.8 540 30.4
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 4.5e-44 183.0 516 30.0
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.0e-43 181.8 454 29.3
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 6.5e-43 179.1 529 30.2
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 4.2e-42 176.4 497 28.6
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.2e-42 176.4 494 30.4
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 2.1e-41 174.1 510 29.2
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 2.7e-41 173.7 625 26.9
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 3.6e-41 173.3 510 29.2
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 4.7e-41 172.9 518 28.6
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 4.7e-41 172.9 528 29.9
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 1.4e-40 171.4 516 27.9
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 1.4e-40 171.4 531 28.1
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 1.5e-39 167.9 548 28.6
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 2.2e-38 164.1 517 27.3
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 3.7e-38 163.3 522 28.5
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 6.3e-38 162.5 516 29.7
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 1.1e-37 161.8 514 27.8
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 1.8e-37 161.0 528 27.8
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 2.4e-37 160.6 452 28.3
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 4.1e-37 159.8 542 26.9
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 4.1e-37 159.8 535 28.2
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 7.0e-37 159.1 512 28.1
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 9.1e-37 158.7 514 28.4
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 1.6e-36 157.9 526 27.2
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 1.6e-36 157.9 519 26.6
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 5.9e-36 156.0 522 28.2
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 7.7e-36 155.6 526 27.8
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 7.7e-36 155.6 515 26.4
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 7.7e-36 155.6 272 39.3
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 1.3e-35 154.8 516 28.1
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 1.3e-35 154.8 516 28.1
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 1.7e-35 154.5 527 27.7
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 2.9e-35 153.7 511 28.0
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 3.8e-35 153.3 520 27.9
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 5.0e-35 152.9 539 26.3
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 1.1e-34 151.8 408 29.7
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 1.5e-34 151.4 513 27.1
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 4.7e-33 146.4 544 26.7
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 9.7e-31 138.7 476 27.9
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 1.3e-30 138.3 462 27.9
MD14G1203500 Malus domestica HOM05D004701 ORTHO05D005220 8.3e-30 135.6 256 35.2
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.9e-28 129.4 313 28.8
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 1.0e-27 128.6 360 25.3
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 3.8e-27 126.7 365 26.8
Actinidia04875 Actinidia chinensis HOM05D004701 ORTHO05D005220 5.0e-27 126.3 248 35.5
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 6.5e-27 125.9 100 59.0
Cpa.g.sc341.2 Carica papaya HOM05D004701 ORTHO05D005220 1.1e-26 125.2 261 35.2
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 1.2e-25 121.7 427 24.6
PGSC0003DMG400019522 Solanum tuberosum HOM05D004701 ORTHO05D005220 6.8e-24 115.9 290 32.4
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 1.8e-21 107.8 88 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 4.1e-21 106.7 364 27.5
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 7.0e-21 105.9 118 45.8
SEGI_05265 Sequoiadendron giganteum HOM05D004701 ORTHO05D005220 2.0e-20 104.4 132 41.7
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 2.7e-20 104.0 92 50.0
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 1.3e-19 101.7 112 46.4
CSS0033275 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 2.3e-16 90.9 207 33.3
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 1.2e-15 88.6 277 30.0
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 4.4e-15 86.7 275 29.1
Ca_14653_v3 Cicer arietinum L. HOM05D004701 ORTHO05D005220 6.6e-11 72.8 235 29.8
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.5e-10 71.6 104 37.5
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.6e-10 69.7 103 35.9
SMO364G0054 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.1e-09 67.8 103 35.0
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 2.8e-09 67.4 62 53.2
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.8e-09 67.4 103 34.0
MELO3C028766.2 Cucumis melo HOM05D001162 ORTHO05D022475 3.6e-09 67.0 52 59.6
Lj5A108T60 Lonicera japonica HOM05D004701 ORTHO05D005220 2.3e-08 64.3 84 46.4
Oeu052446.1 Olea europaea HOM05D004701 ORTHO05D005220 4.0e-08 63.5 96 43.8
AagrBONN_evm.TU.Sc2ySwM_344.2754 Anthoceros agrestis HOM05D004701 ORTHO05D005220 8.9e-08 62.4 88 42.0
MBI05_g10671_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 8.9e-08 62.4 37 73.0
Hma1.2p1_0060F.1_g033570 Hydrangea macrophylla HOM05D004701 ORTHO05D005220 7.5e-07 59.3 81 46.9
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.7e-06 57.0 78 37.2
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 6.4e-06 56.2 60 40.0


User provided reference genes

Program Settings