Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019721 Vanilla planifolia HOM05D001291 ORTHO05D000038 1.1e-139 500.0 245 100.0
HPP92_019718 Vanilla planifolia HOM05D001291 ORTHO05D001375 1.5e-133 479.6 238 98.3
TAR622G1312 Trochodendron aralioides HOM05D000082 ORTHO05D000038 1.7e-09 67.4 181 32.6
Potri.015G047900 Populus trichocarpa HOM05D000082 ORTHO05D000038 1.5e-08 64.3 103 40.8
PSO478G0192 Papaver somniferum HOM05D000082 ORTHO05D000038 3.3e-08 63.2 84 44.0
CDE02G1842 Ceratophyllum demersum HOM05D000082 ORTHO05D000038 4.3e-08 62.8 100 38.0
Atru.chr9.637 Acer truncatum HOM05D000082 ORTHO05D000038 5.6e-08 62.4 124 38.7
Ciclev10018495m.g Citrus clementina HOM05D005717 ORTHO05D007221 5.6e-08 62.4 133 38.3
Cc04_g08020 Coffea canephora HOM05D000082 ORTHO05D000038 5.6e-08 62.4 98 42.9
Aqoxy3G00577 Aquilegia oxysepala HOM05D000082 ORTHO05D000038 7.3e-08 62.0 82 45.1
MBI15_g13729_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D000038 7.3e-08 62.0 223 35.0
Manes.06G079900 Manihot esculenta HOM05D000082 ORTHO05D000038 7.3e-08 62.0 104 39.4
CANSAT01G0488 Cannabis sativa HOM05D000082 ORTHO05D000038 9.6e-08 61.6 132 35.6
GSVIVG01008170001 Vitis vinifera HOM05D005717 ORTHO05D007221 1.3e-07 61.2 157 35.0
Duzib084G0164 Durio zibethinus HOM05D000082 ORTHO05D000038 1.6e-07 60.8 88 43.2
Dinv38626 Davidia involucrata HOM05D000082 ORTHO05D000038 2.1e-07 60.5 134 35.1
PSO017G4357 Papaver somniferum HOM05D000082 ORTHO05D000038 2.1e-07 60.5 83 43.4
Thecc.03G110600 Theobroma cacao HOM05D000082 ORTHO05D000038 2.8e-07 60.1 85 42.4
Glyma.13G050800 Glycine max HOM05D000082 ORTHO05D000038 3.6e-07 59.7 188 34.0
MD06G1206700 Malus domestica HOM05D000082 ORTHO05D000038 3.6e-07 59.7 135 36.3
Sopen03g033750 Solanum pennellii HOM05D000082 ORTHO05D000038 6.2e-07 58.9 269 29.0
Ca_21748_v3 Cicer arietinum L. HOM05D000082 ORTHO05D000038 8.1e-07 58.5 222 31.1
FAN13G1552 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.4e-06 57.8 150 34.0
Sabra15G0079200 Salix brachista HOM05D000082 ORTHO05D000038 1.4e-06 57.8 101 37.6
FAN08G3694 Fragaria x ananassa HOM05D000082 ORTHO05D000038 1.8e-06 57.4 149 33.6
Lj9P436T63 Lonicera japonica HOM05D000082 ORTHO05D000038 1.8e-06 57.4 90 41.1
Solyc03g114680.3 Solanum lycopersicum HOM05D000082 ORTHO05D000038 1.8e-06 57.4 269 29.7
FvH4_5g13270 Fragaria vesca HOM05D000082 ORTHO05D000038 3.1e-06 56.6 142 35.2
FAN18G2262 Fragaria x ananassa HOM05D000082 ORTHO05D000038 3.1e-06 56.6 142 35.2
Peaxi162Scf00017g00321 Petunia axillaris HOM05D000082 ORTHO05D000038 3.1e-06 56.6 97 42.3
CDE01G0367 Ceratophyllum demersum HOM05D000082 ORTHO05D000038 4.0e-06 56.2 108 35.2
Glyma.19G037800 Glycine max HOM05D000082 ORTHO05D000038 4.0e-06 56.2 178 32.0
Manes.14G090100 Manihot esculenta HOM05D000082 ORTHO05D000038 4.0e-06 56.2 104 38.5
PGSC0003DMG400024614 Solanum tuberosum HOM05D000082 ORTHO05D000038 4.0e-06 56.2 268 29.5
Nitab4.5_0002805g0030 Nicotiana tabacum HOM05D000082 ORTHO05D000038 5.3e-06 55.8 97 41.2
EL10Ac5g11199 Beta vulgaris HOM05D000082 ORTHO05D000038 9.0e-06 55.1 51 47.1
Lj4g0010494 Lotus japonicus HOM05D000082 ORTHO05D000038 9.0e-06 55.1 144 34.7
Prupe.5G211100 Prunus persica HOM05D000082 ORTHO05D000038 9.0e-06 55.1 130 33.8
TAR629G1616 Trochodendron aralioides HOM05D000082 ORTHO05D000038 9.0e-06 55.1 106 35.8


User provided reference genes

Program Settings