Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 1.9e-181 639.0 323 100.0
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 6.6e-65 251.9 316 47.8
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 4.7e-63 245.7 326 47.9
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 3.1e-62 243.0 329 44.4
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 3.4e-61 239.6 328 46.0
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 5.8e-61 238.8 348 44.8
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.7e-60 237.3 322 46.0
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 8.3e-60 235.0 329 45.0
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 3.2e-59 233.0 326 43.9
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 3.5e-58 229.6 308 46.8
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 1.3e-57 227.6 330 44.2
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 3.0e-57 226.5 332 43.4
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 6.6e-57 225.3 318 44.3
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 6.6e-57 225.3 319 43.6
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 6.6e-57 225.3 329 43.2
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 6.6e-57 225.3 321 43.9
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 8.6e-57 224.9 321 43.9
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 1.5e-56 224.2 319 43.3
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 4.3e-56 222.6 321 43.6
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 9.5e-56 221.5 326 42.0
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 1.2e-55 221.1 327 43.1
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 1.2e-55 221.1 334 42.2
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 2.8e-55 219.9 324 42.9
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 1.8e-54 217.2 315 44.1
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 3.1e-54 216.5 324 43.5
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 5.2e-54 215.7 321 43.9
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 6.8e-54 215.3 321 42.4
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 1.5e-53 214.2 331 40.2
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 2.6e-53 213.4 308 42.5
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 4.4e-53 212.6 324 43.5
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 4.4e-53 212.6 312 44.2
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 4.4e-53 212.6 324 42.0
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 4.4e-53 212.6 317 42.6
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 4.4e-53 212.6 326 43.3
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 7.6e-53 211.8 324 42.6
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 9.9e-53 211.5 320 40.9
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 9.9e-53 211.5 327 42.8
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 1.3e-52 211.1 320 41.9
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 2.2e-52 210.3 330 41.8
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 3.8e-52 209.5 320 41.2
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 3.8e-52 209.5 317 39.4
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 3.2e-51 206.5 324 42.3
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.1e-51 206.1 324 42.9
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 7.1e-51 205.3 328 42.1
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 7.1e-51 205.3 332 41.9
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 9.2e-51 204.9 346 40.5
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 9.2e-51 204.9 323 40.9
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 9.2e-51 204.9 320 43.1
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.2e-50 204.5 325 42.5
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.5e-50 203.0 325 42.5
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 3.5e-50 203.0 326 42.0
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 6.0e-50 202.2 336 40.2
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 6.0e-50 202.2 322 41.9
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 1.0e-49 201.4 333 40.5
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 1.3e-49 201.1 324 40.1
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.3e-49 201.1 326 43.9
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 1.3e-49 201.1 316 43.0
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 1.7e-49 200.7 345 40.0
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 2.3e-49 200.3 324 42.9
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.3e-49 200.3 325 40.9
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 6.6e-49 198.7 320 40.3
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 8.7e-49 198.4 324 40.1
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 1.1e-48 198.0 329 40.4
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.9e-48 197.2 320 40.9
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 1.9e-48 197.2 330 39.1
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 1.9e-48 197.2 322 39.8
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.9e-48 197.2 326 42.6
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 2.5e-48 196.8 322 40.1
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 1.2e-47 194.5 338 42.3
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 2.1e-47 193.7 309 43.7
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 3.6e-47 193.0 325 39.1
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 4.7e-47 192.6 323 39.6
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 1.4e-46 191.0 324 41.0
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.4e-46 191.0 324 41.0
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.1e-46 189.9 322 41.0
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 9.0e-46 188.3 322 39.4
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 9.9e-45 184.9 323 39.3
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 1.7e-44 184.1 332 41.9
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 2.2e-44 183.7 325 38.5
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 3.8e-44 183.0 338 42.0
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 6.4e-44 182.2 322 39.8
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 1.1e-43 181.4 326 41.1
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.1e-43 181.4 341 37.5
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 3.2e-43 179.9 303 43.6
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 1.2e-42 177.9 323 39.0
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 1.2e-42 177.9 310 38.1
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 4.6e-42 176.0 301 40.9
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 4.6e-42 176.0 325 39.7
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 1.3e-41 174.5 320 37.8
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 5.1e-41 172.6 333 38.4
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 8.7e-41 171.8 314 38.5
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.9e-40 170.6 325 36.9
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 2.5e-40 170.2 324 36.4
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 3.3e-40 169.9 286 39.5
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 1.3e-39 167.9 350 37.7
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 3.1e-38 163.3 314 39.5
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 5.3e-38 162.5 315 39.0
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 1.5e-37 161.0 400 32.5
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 4.9e-36 156.0 339 33.6
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 5.4e-35 152.5 308 36.0
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 1.2e-34 151.4 349 36.4
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 6.7e-33 145.6 320 33.8
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 2.5e-32 143.7 393 30.5
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 5.6e-32 142.5 312 35.6
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 9.6e-32 141.7 208 42.8
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 4.5e-29 132.9 306 34.3
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 1.3e-25 121.3 171 43.9
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 1.3e-25 121.3 262 39.3
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 1.8e-25 120.9 185 42.7
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 6.7e-25 119.0 268 34.3
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 9.6e-24 115.2 182 41.8
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 1.0e-20 105.1 133 45.1
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 2.2e-20 104.0 354 26.8
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 2.2e-15 87.4 432 25.9
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 5.3e-14 82.8 185 34.1
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 6.1e-10 69.3 82 46.3
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 3.9e-09 66.6 73 52.1
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 2.5e-08 63.9 113 38.9


User provided reference genes

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