Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.2e-69 266.5 148 100.0
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.3e-57 225.7 134 94.8
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 7.5e-24 114.4 133 49.6
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 2.4e-22 109.4 133 46.6
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.7e-20 103.2 125 50.4
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 2.3e-20 102.8 133 44.4
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 1.5e-19 100.1 133 45.9
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 3.3e-19 99.0 137 44.5
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 3.3e-19 99.0 134 42.5
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 9.5e-19 97.4 133 43.6
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 2.8e-18 95.9 137 41.6
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 2.8e-18 95.9 133 42.1
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 4.7e-18 95.1 137 40.1
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 4.7e-18 95.1 133 42.1
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 1.4e-17 93.6 133 42.1
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 1.4e-17 93.6 133 42.9
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 1.8e-17 93.2 137 40.9
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 2.3e-17 92.8 133 42.9
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 3.1e-17 92.4 133 42.9
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 1.5e-16 90.1 133 42.1
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 1.5e-16 90.1 129 41.9
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 2.0e-16 89.7 139 38.8
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 4.4e-16 88.6 129 40.3
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.4e-16 88.6 133 40.6
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.4e-16 88.6 133 40.6
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 4.4e-16 88.6 131 41.2
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 5.8e-16 88.2 133 42.9
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 7.5e-16 87.8 135 38.5
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 1.7e-15 86.7 128 40.6
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.7e-15 86.7 129 41.9
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.7e-15 86.7 135 37.8
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.7e-15 86.7 133 39.8
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.2e-15 86.3 131 39.7
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.2e-15 86.3 131 39.7
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.9e-15 85.9 129 41.9
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 3.7e-15 85.5 135 37.8
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 4.9e-15 85.1 137 37.2
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 6.4e-15 84.7 133 39.1
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 8.3e-15 84.3 129 41.9
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 1.1e-14 84.0 133 37.6
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.4e-14 83.6 137 38.7
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 1.9e-14 83.2 137 37.2
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 3.2e-14 82.4 132 34.8
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 3.2e-14 82.4 128 40.6
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 4.1e-14 82.0 137 37.2
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.4e-14 81.6 133 39.1
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 5.4e-14 81.6 132 34.8
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 5.4e-14 81.6 132 34.8
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 5.4e-14 81.6 125 40.8
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 7.1e-14 81.3 137 38.7
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.2e-13 80.5 131 38.2
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 1.2e-13 80.5 137 37.2
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.2e-13 80.5 133 35.3
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 2.1e-13 79.7 137 36.5
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 6.0e-13 78.2 136 38.2
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 1.0e-12 77.4 124 39.5
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.3e-12 77.0 132 33.3
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.3e-12 77.0 132 33.3
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.7e-12 76.6 133 33.8
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 1.7e-12 76.6 129 38.8
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 2.3e-12 76.3 139 35.3
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 3.9e-12 75.5 124 38.7
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 8.6e-12 74.3 133 34.6
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 8.6e-12 74.3 120 38.3
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 1.1e-11 73.9 133 34.6
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 1.1e-11 73.9 132 32.6
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 1.9e-11 73.2 132 31.8
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.9e-11 73.2 131 36.6
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 2.5e-11 72.8 125 40.8
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 5.6e-11 71.6 133 33.8
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 2.8e-10 69.3 133 35.3
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 1.1e-09 67.4 128 29.7
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.8e-09 66.6 133 33.8
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 3.1e-09 65.9 139 33.1
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 5.8e-08 61.6 111 36.9
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 7.6e-08 61.2 129 34.1
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 2.9e-07 59.3 137 29.9
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 1.1e-06 57.4 83 44.6


User provided reference genes

Program Settings