Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019580 Vanilla planifolia HOM05D001492 ORTHO05D001400 4.8e-61 237.7 121 100.0
HPP92_019630 Vanilla planifolia HOM05D001492 ORTHO05D001400 4.8e-61 237.7 121 100.0
HPP92_018769 Vanilla planifolia HOM05D001492 ORTHO05D001400 4.6e-19 98.2 115 52.2
Thecc.01G075200 Theobroma cacao HOM05D001492 ORTHO05D001400 1.7e-10 69.7 116 41.4
Actinidia16416 Actinidia chinensis HOM05D001492 ORTHO05D001400 3.0e-10 68.9 77 49.4
Duzib147G1488 Durio zibethinus HOM05D001492 ORTHO05D001400 6.6e-10 67.8 109 40.4
CSS0013283 Camellia sinensis var. sinensis HOM05D001492 ORTHO05D001400 1.5e-09 66.6 77 48.1
CSS0041133 Camellia sinensis var. sinensis HOM05D001492 ORTHO05D001400 1.5e-09 66.6 77 48.1
Aqoxy6G02532 Aquilegia oxysepala HOM05D001492 ORTHO05D001400 1.9e-09 66.2 147 40.1
Rhsim08G0092200 Rhododendron simsii HOM05D001492 ORTHO05D001400 5.6e-09 64.7 77 49.4
Gohir.D03G030000 Gossypium hirsutum HOM05D001492 ORTHO05D001400 7.3e-09 64.3 150 32.7
Gohir.D11G210400 Gossypium hirsutum HOM05D001492 ORTHO05D001400 7.3e-09 64.3 113 37.2
Duzib264G0193 Durio zibethinus HOM05D001492 ORTHO05D001400 1.6e-08 63.2 89 42.7
Gorai.003G031700 Gossypium raimondii HOM05D001492 ORTHO05D001400 2.1e-08 62.8 150 32.0
Gohir.A02G150200 Gossypium hirsutum HOM05D001492 ORTHO05D001400 3.6e-08 62.0 113 37.2
Gorai.007G225700 Gossypium raimondii HOM05D001492 ORTHO05D001400 4.7e-08 61.6 113 36.3
Oeu011978.1 Olea europaea HOM05D001492 ORTHO05D001400 8.1e-08 60.8 110 31.8
COL.COLO4_11604 Corchorus olitorius HOM05D001492 ORTHO05D001400 1.1e-07 60.5 104 37.5
Lj7A110T25 Lonicera japonica HOM05D001492 ORTHO05D001400 1.4e-07 60.1 79 43.0
Lalb_Chr16g0378961 Lupinus albus HOM05D001492 ORTHO05D001400 1.4e-07 60.1 74 47.3
vmacro18019 Vaccinium macrocarpon HOM05D001492 ORTHO05D001400 2.3e-07 59.3 78 47.4
Potri.007G006400 Populus trichocarpa HOM05D001492 ORTHO05D001400 4.0e-07 58.5 95 36.8
Sabra14G0006200 Salix brachista HOM05D001492 ORTHO05D001400 4.0e-07 58.5 105 38.1
CDE07G0831 Ceratophyllum demersum HOM05D001492 ORTHO05D001400 6.8e-07 57.8 120 40.0
Hma1.2p1_0424F.1_g150560 Hydrangea macrophylla HOM05D001492 ORTHO05D001400 6.8e-07 57.8 107 34.6
MBI16_g16468_MAGBIO Magnolia biondii HOM05D001492 ORTHO05D001400 6.8e-07 57.8 150 33.3
Lj2g0025461 Lotus japonicus HOM05D001492 ORTHO05D001400 1.2e-06 57.0 149 36.9
Oeu032430.1 Olea europaea HOM05D001492 ORTHO05D001400 1.2e-06 57.0 73 41.1
Sc16g0002230 Simmondsia chinensis HOM05D001492 ORTHO05D001400 1.2e-06 57.0 52 55.8
Sc16g0002840 Simmondsia chinensis HOM05D001492 ORTHO05D001400 1.2e-06 57.0 52 55.8
Duzib187G0564 Durio zibethinus HOM05D001492 ORTHO05D001400 1.5e-06 56.6 108 36.1
Atru.chr3.1049 Acer truncatum HOM05D001492 ORTHO05D001400 2.0e-06 56.2 82 46.3
MD02G1188800 Malus domestica HOM05D001492 ORTHO05D001400 2.0e-06 56.2 90 42.2
MD15G1299800 Malus domestica HOM05D001492 ORTHO05D001400 2.0e-06 56.2 81 44.4
Nn6g34512 Nelumbo nucifera HOM05D001492 ORTHO05D001400 2.0e-06 56.2 82 43.9
Manes.13G109700 Manihot esculenta HOM05D001492 ORTHO05D001400 2.6e-06 55.8 78 38.5
MELO3C007651.2 Cucumis melo HOM05D001492 ORTHO05D001400 3.4e-06 55.5 113 33.6
Manes.12G116700 Manihot esculenta HOM05D001492 ORTHO05D001400 3.4e-06 55.5 90 43.3
Medtr5g015180 Medicago truncatula HOM05D001492 ORTHO05D001400 3.4e-06 55.5 120 35.8
PGR004G1641 Punica granatum HOM05D001492 ORTHO05D001400 3.4e-06 55.5 77 44.2
CAN.G153.7 Capsicum annuum HOM05D001492 ORTHO05D001400 4.4e-06 55.1 48 54.2
CiPaw.02G001300 Carya illinoinensis HOM05D001492 ORTHO05D001400 5.8e-06 54.7 148 31.1
Ciclev10025443m.g Citrus clementina HOM05D001492 ORTHO05D001400 5.8e-06 54.7 100 39.0
Os05g0510700 Oryza sativa ssp. japonica HOM05D001492 ORTHO05D001400 5.8e-06 54.7 105 41.0
Potri.014G008400 Populus trichocarpa HOM05D001492 ORTHO05D001400 5.8e-06 54.7 106 34.9
QL06p039065 Quercus lobata HOM05D001492 ORTHO05D001400 5.8e-06 54.7 110 30.9
Ca_24675_v3 Cicer arietinum L. HOM05D001492 ORTHO05D001400 7.6e-06 54.3 153 35.9
Ca_30015_v3 Cicer arietinum L. HOM05D001492 ORTHO05D001400 7.6e-06 54.3 153 35.9
Dinv23037 Davidia involucrata HOM05D001492 ORTHO05D001400 7.6e-06 54.3 79 41.8
TAR628G1732 Trochodendron aralioides HOM05D001492 ORTHO05D001400 7.6e-06 54.3 80 45.0
CsaV3_6G044260 Cucumis sativus L. HOM05D001492 ORTHO05D001400 9.9e-06 53.9 113 30.1
PSO017G0056 Papaver somniferum HOM05D001492 ORTHO05D001400 9.9e-06 53.9 76 44.7
PSO170G2333 Papaver somniferum HOM05D001492 ORTHO05D001400 9.9e-06 53.9 76 44.7


User provided reference genes

Program Settings