Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019573 Vanilla planifolia HOM05D004882 ORTHO05D005551 1.9e-226 788.9 406 100.0
BraA01t01961Z Brassica rapa HOM05D004882 ORTHO05D005551 6.2e-12 76.3 371 27.5
Os03g0770900 Oryza sativa ssp. japonica HOM05D004882 ORTHO05D005551 8.1e-12 75.9 308 30.2
Gorai.005G262300 Gossypium raimondii HOM05D004882 ORTHO05D005551 1.1e-11 75.5 474 28.9
MBI16_g35720_MAGBIO Magnolia biondii HOM05D004882 ORTHO05D005551 1.1e-11 75.5 304 28.6
BolC1t02498H Brassica oleracea HOM05D004882 ORTHO05D005551 2.4e-11 74.3 440 25.5
AT4G17000 Arabidopsis thaliana HOM05D004882 ORTHO05D005551 3.1e-11 73.9 220 30.5
C01p25470 Brassica napus HOM05D004882 ORTHO05D005551 3.1e-11 73.9 440 25.5
BcaC09g50433 Brassica carinata HOM05D004882 ORTHO05D005551 4.0e-11 73.6 440 25.0
arahy.Tifrunner.gnm1.ann1.6ERH6H Arachis hypogaea HOM05D004882 ORTHO05D005551 6.9e-11 72.8 234 28.6
Gohir.A03G212800 Gossypium hirsutum HOM05D004882 ORTHO05D005551 9.0e-11 72.4 439 27.1
AL7G37720 Arabidopsis lyrata HOM05D004882 ORTHO05D005551 1.5e-10 71.6 221 33.0
TPR.G32640 Trifolium pratense HOM05D004882 ORTHO05D005551 1.5e-10 71.6 261 31.0
Thhalv10024666m.g Eutrema salsugineum HOM05D004882 ORTHO05D005551 4.5e-10 70.1 197 31.5
BcaNung00137 Brassica carinata HOM05D004882 ORTHO05D005551 1.3e-09 68.6 209 31.6
Lj5C223T12 Lonicera japonica HOM05D004882 ORTHO05D005551 1.3e-09 68.6 282 27.3
BcaC07g38031 Brassica carinata HOM05D004882 ORTHO05D005551 4.9e-09 66.6 130 37.7
A01p20310 Brassica napus HOM05D004882 ORTHO05D005551 4.9e-09 66.6 482 23.7
CARHR223560 Cardamine hirsuta HOM05D004882 ORTHO05D005551 8.4e-09 65.9 164 34.1
Carub.0007s2442 Capsella rubella HOM05D004882 ORTHO05D005551 1.4e-08 65.1 230 30.0
Peaxi162Scf00016g03342 Petunia axillaris HOM05D004882 ORTHO05D005551 1.4e-08 65.1 315 28.3
PGSC0003DMG400005123 Solanum tuberosum HOM05D004882 ORTHO05D005551 1.9e-08 64.7 310 26.1
Zm00001eb213820 Zea mays HOM05D004882 ORTHO05D005551 1.9e-08 64.7 362 27.9
Nitab4.5_0005609g0020 Nicotiana tabacum HOM05D004882 ORTHO05D005551 4.2e-08 63.5 303 27.1
Sc08g0004240 Simmondsia chinensis HOM05D004882 ORTHO05D005551 5.5e-08 63.2 95 46.3
Solyc01g106540.4 Solanum lycopersicum HOM05D004882 ORTHO05D005551 9.3e-08 62.4 300 26.3
CDE01G0159 Ceratophyllum demersum HOM05D004882 ORTHO05D005551 1.2e-07 62.0 409 24.4
Glyma.13G253200 Glycine max HOM05D004882 ORTHO05D005551 1.6e-07 61.6 311 26.0
Glyma.15G061700 Glycine max HOM05D004882 ORTHO05D005551 2.1e-07 61.2 364 25.8
Medtr2g010490 Medicago truncatula HOM05D004882 ORTHO05D005551 2.1e-07 61.2 276 27.9
Nn6g34538 Nelumbo nucifera HOM05D004882 ORTHO05D005551 2.1e-07 61.2 361 26.6
Potri.009G081900 Populus trichocarpa HOM05D004882 ORTHO05D005551 4.6e-07 60.1 197 30.5
CSS0014319 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 6.0e-07 59.7 403 22.8
Sopen01g048900 Solanum pennellii HOM05D004882 ORTHO05D005551 6.0e-07 59.7 309 26.9
arahy.Tifrunner.gnm1.ann1.189H81 Arachis hypogaea HOM05D004882 ORTHO05D005551 7.9e-07 59.3 288 29.2
BcaB04g18391 Brassica carinata HOM05D004882 ORTHO05D005551 1.0e-06 58.9 410 27.8
CSS0002606 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 1.0e-06 58.9 409 22.7
Hund06491 Selenicereus undatus HOM05D004882 ORTHO05D005551 1.3e-06 58.5 351 27.6
THA.LOC104807193 Tarenaya hassleriana HOM05D004882 ORTHO05D005551 1.3e-06 58.5 327 27.8
Aa31LG2G13080 Aethionema arabicum HOM05D004882 ORTHO05D005551 1.8e-06 58.2 414 26.3
AUR62027054 Chenopodium quinoa HOM05D004882 ORTHO05D005551 2.3e-06 57.8 326 28.2
Migut.B00500 Erythranthe guttata HOM05D004882 ORTHO05D005551 3.9e-06 57.0 442 24.2
Zm00001eb058870 Zea mays HOM05D004882 ORTHO05D005551 5.1e-06 56.6 379 27.7
CSS0001570 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 6.7e-06 56.2 158 36.1
Eucgr.I02514 Eucalyptus grandis HOM05D004882 ORTHO05D005551 6.7e-06 56.2 331 26.3
Actinidia02424 Actinidia chinensis HOM05D004882 ORTHO05D005551 8.7e-06 55.8 380 25.3
Aqoxy5G00818 Aquilegia oxysepala HOM05D004882 ORTHO05D005551 8.7e-06 55.8 466 23.6
CANSAT25G1117 Cannabis sativa HOM05D004882 ORTHO05D005551 8.7e-06 55.8 210 27.1


User provided reference genes

Program Settings