Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019572 Vanilla planifolia HOM05D004882 ORTHO05D005551 6.7e-75 283.9 139 100.0
Nitab4.5_0001477g0110 Nicotiana tabacum HOM05D004882 ORTHO05D005551 4.1e-24 115.2 108 52.8
MBI16_g35720_MAGBIO Magnolia biondii HOM05D004882 ORTHO05D005551 9.2e-24 114.0 89 58.4
Nn6g34538 Nelumbo nucifera HOM05D004882 ORTHO05D005551 1.6e-23 113.2 75 69.3
Nitab4.5_0005609g0020 Nicotiana tabacum HOM05D004882 ORTHO05D005551 7.8e-23 110.9 95 57.9
CiPaw.05G024800 Carya illinoinensis HOM05D004882 ORTHO05D005551 3.9e-22 108.6 75 66.7
TAR376G0385 Trochodendron aralioides HOM05D004882 ORTHO05D005551 3.9e-22 108.6 74 67.6
Sopen01g048900 Solanum pennellii HOM05D004882 ORTHO05D005551 5.1e-22 108.2 94 56.4
Cfa004757 Carpinus fangiana HOM05D004882 ORTHO05D005551 6.6e-22 107.8 75 66.7
Solyc01g106540.4 Solanum lycopersicum HOM05D004882 ORTHO05D005551 6.6e-22 107.8 94 56.4
PGSC0003DMG400005123 Solanum tuberosum HOM05D004882 ORTHO05D005551 6.6e-22 107.8 94 56.4
TAR381G1068 Trochodendron aralioides HOM05D004882 ORTHO05D005551 6.6e-22 107.8 75 68.0
MSTRG.16657 Avicennia marina HOM05D004882 ORTHO05D005551 8.6e-22 107.5 75 62.7
Dinv16049 Davidia involucrata HOM05D004882 ORTHO05D005551 8.6e-22 107.5 73 68.5
Os03g0770900 Oryza sativa ssp. japonica HOM05D004882 ORTHO05D005551 8.6e-22 107.5 84 61.9
Sc08g0004240 Simmondsia chinensis HOM05D004882 ORTHO05D005551 1.1e-21 107.1 75 65.3
TAR628G0407 Trochodendron aralioides HOM05D004882 ORTHO05D005551 1.1e-21 107.1 73 67.1
Haze_10355 Corylus avellana HOM05D004882 ORTHO05D005551 1.5e-21 106.7 75 65.3
CSS0002606 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 2.5e-21 105.9 91 58.2
CDE01G0159 Ceratophyllum demersum HOM05D004882 ORTHO05D005551 2.5e-21 105.9 93 55.9
FvH4_2g02560 Fragaria vesca HOM05D004882 ORTHO05D005551 4.3e-21 105.1 74 63.5
FAN24G2723 Fragaria x ananassa HOM05D004882 ORTHO05D005551 4.3e-21 105.1 74 63.5
RcHm_v2.0_Chr6g0246451 Rosa chinensis HOM05D004882 ORTHO05D005551 4.3e-21 105.1 74 63.5
GSVIVG01036969001 Vitis vinifera HOM05D004882 ORTHO05D005551 4.3e-21 105.1 69 68.1
FAN20G2896 Fragaria x ananassa HOM05D004882 ORTHO05D005551 5.6e-21 104.8 74 63.5
Oeu008559.3 Olea europaea HOM05D004882 ORTHO05D005551 5.6e-21 104.8 113 50.4
Cc02_g20370 Coffea canephora HOM05D004882 ORTHO05D005551 7.3e-21 104.4 74 63.5
SalBow6G6879 Salvia bowleyana HOM05D004882 ORTHO05D005551 1.2e-20 103.6 75 62.7
FAN15G2336 Fragaria x ananassa HOM05D004882 ORTHO05D005551 1.6e-20 103.2 74 62.2
MD05G1112300 Malus domestica HOM05D004882 ORTHO05D005551 2.1e-20 102.8 72 65.3
Oeu025237.1 Olea europaea HOM05D004882 ORTHO05D005551 2.1e-20 102.8 76 60.5
SGA_v2.0_scaffold32G12966 Striga asiatica HOM05D002023 ORTHO05D002049 2.8e-20 102.4 77 61.0
Migut.B00500 Erythranthe guttata HOM05D004882 ORTHO05D005551 3.6e-20 102.1 86 58.1
Zm00001eb058870 Zea mays HOM05D004882 ORTHO05D005551 4.7e-20 101.7 74 66.2
Hma1.2p1_2001F.1_g310650 Hydrangea macrophylla HOM05D004882 ORTHO05D005551 6.2e-20 101.3 75 64.0
Lj9A340T57 Lonicera japonica HOM05D004882 ORTHO05D005551 6.2e-20 101.3 71 63.4
Prupe.8G156900 Prunus persica HOM05D004882 ORTHO05D005551 6.2e-20 101.3 71 66.2
Aqoxy5G00818 Aquilegia oxysepala HOM05D004882 ORTHO05D005551 8.1e-20 100.9 73 60.3
Eucgr.I02514 Eucalyptus grandis HOM05D004882 ORTHO05D005551 8.1e-20 100.9 70 68.6
AUR62030897 Chenopodium quinoa HOM05D004882 ORTHO05D005551 1.4e-19 100.1 80 57.5
ECA234G1559 Erigeron canadensis HOM05D004882 ORTHO05D005551 1.8e-19 99.8 84 56.0
Hund06491 Selenicereus undatus HOM05D004882 ORTHO05D005551 1.8e-19 99.8 73 61.6
TPR.G32640 Trifolium pratense HOM05D004882 ORTHO05D005551 1.8e-19 99.8 77 59.7
Atru.chr5.2156 Acer truncatum HOM05D004882 ORTHO05D005551 3.1e-19 99.0 88 56.8
MD10G1114900 Malus domestica HOM05D004882 ORTHO05D005551 3.1e-19 99.0 72 62.5
Peaxi162Scf00016g03342 Petunia axillaris HOM05D004882 ORTHO05D005551 3.1e-19 99.0 72 62.5
Ciclev10030341m.g Citrus clementina HOM05D004882 ORTHO05D005551 4.0e-19 98.6 71 66.2
AUR62027054 Chenopodium quinoa HOM05D004882 ORTHO05D005551 5.2e-19 98.2 74 60.8
Duzib132G0818 Durio zibethinus HOM05D004882 ORTHO05D005551 5.2e-19 98.2 71 63.4
Psat1g212160 Pisum sativum HOM05D004882 ORTHO05D005551 5.2e-19 98.2 79 59.5
Zm00001eb213820 Zea mays HOM05D004882 ORTHO05D005551 5.2e-19 98.2 74 63.5
Actinidia02424 Actinidia chinensis HOM05D004882 ORTHO05D005551 6.8e-19 97.8 75 61.3
Manes.10G090200 Manihot esculenta HOM05D004882 ORTHO05D005551 6.8e-19 97.8 75 65.3
Medtr2g010490 Medicago truncatula HOM05D004882 ORTHO05D005551 6.8e-19 97.8 79 59.5
Phvul.006G198000 Phaseolus vulgaris HOM05D004882 ORTHO05D005551 6.8e-19 97.8 74 62.2
Lalb_Chr18g0060201 Lupinus albus HOM05D004882 ORTHO05D005551 8.9e-19 97.4 73 61.6
Ca_00196_v3 Cicer arietinum L. HOM05D004882 ORTHO05D005551 1.2e-18 97.1 79 59.5
Glyma.13G253200 Glycine max HOM05D004882 ORTHO05D005551 1.2e-18 97.1 75 60.0
PSO170G1497 Papaver somniferum HOM05D004882 ORTHO05D005551 1.2e-18 97.1 76 60.5
QL11p027705 Quercus lobata HOM05D004882 ORTHO05D005551 1.2e-18 97.1 74 63.5
vmacro01917 Vaccinium macrocarpon HOM05D004882 ORTHO05D005551 1.2e-18 97.1 70 64.3
TWI59G1177 Tripterygium wilfordii HOM05D004882 ORTHO05D005551 1.5e-18 96.7 88 53.4
Ah.01g024370 Amaranthus hybridus HOM05D004882 ORTHO05D005551 2.0e-18 96.3 76 59.2
CANSAT25G1117 Cannabis sativa HOM05D004882 ORTHO05D005551 2.0e-18 96.3 96 53.1
HanXRQChr05g0136851 Helianthus annuus HOM05D004882 ORTHO05D005551 2.0e-18 96.3 114 43.9
PSO017G3844 Papaver somniferum HOM05D004882 ORTHO05D005551 2.0e-18 96.3 76 60.5
PGR142G0772 Punica granatum HOM05D004882 ORTHO05D005551 2.0e-18 96.3 73 60.3
Manes.07G049500 Manihot esculenta HOM05D004882 ORTHO05D005551 2.6e-18 95.9 82 58.5
Thecc.02G034500 Theobroma cacao HOM05D004882 ORTHO05D005551 2.6e-18 95.9 82 57.3
Duzib248G0647 Durio zibethinus HOM05D004882 ORTHO05D005551 3.4e-18 95.5 74 59.5
Gohir.A03G212800 Gossypium hirsutum HOM05D004882 ORTHO05D005551 3.4e-18 95.5 71 63.4
Gohir.D02G234300 Gossypium hirsutum HOM05D004882 ORTHO05D005551 3.4e-18 95.5 71 63.4
Gorai.005G262300 Gossypium raimondii HOM05D004882 ORTHO05D005551 3.4e-18 95.5 71 63.4
Actinidia00336 Actinidia chinensis HOM05D004882 ORTHO05D005551 4.4e-18 95.1 69 63.8
DCAR_021925 Daucus carota HOM05D004882 ORTHO05D005551 4.4e-18 95.1 87 56.3
Potri.009G081900 Populus trichocarpa HOM05D004882 ORTHO05D005551 5.8e-18 94.7 76 60.5
Sabra16G0180100 Salix brachista HOM05D004882 ORTHO05D005551 5.8e-18 94.7 71 63.4
COL.COLO4_17832 Corchorus olitorius HOM05D004882 ORTHO05D005551 7.6e-18 94.4 71 62.0
Lj6g0001174 Lotus japonicus HOM05D004882 ORTHO05D005551 7.6e-18 94.4 74 58.1
Aa31LG2G13080 Aethionema arabicum HOM05D004882 ORTHO05D005551 9.9e-18 94.0 70 62.9
EL10Ac9g22153 Beta vulgaris HOM05D004882 ORTHO05D005551 1.7e-17 93.2 77 58.4
Potri.001G287800 Populus trichocarpa HOM05D004882 ORTHO05D005551 1.7e-17 93.2 75 60.0
Cpa.g.sc20.70 Carica papaya HOM05D004882 ORTHO05D005551 2.2e-17 92.8 89 53.9
unitig_21.g20709 Utricularia gibba HOM05D004882 ORTHO05D005551 2.2e-17 92.8 75 56.0
BcaNung00137 Brassica carinata HOM05D004882 ORTHO05D005551 2.9e-17 92.4 71 60.6
Sed0010536 Sechium edule HOM05D004882 ORTHO05D005551 2.9e-17 92.4 69 60.9
VMungo0540G0872 Vigna mungo HOM05D004882 ORTHO05D005551 3.8e-17 92.0 72 59.7
Sabra09G0063500 Salix brachista HOM05D004882 ORTHO05D005551 4.9e-17 91.7 71 60.6
arahy.Tifrunner.gnm1.ann1.189H81 Arachis hypogaea HOM05D004882 ORTHO05D005551 6.4e-17 91.3 74 55.4
BcaC09g50433 Brassica carinata HOM05D004882 ORTHO05D005551 6.4e-17 91.3 71 59.2
A01p20310 Brassica napus HOM05D004882 ORTHO05D005551 6.4e-17 91.3 71 59.2
C01p25470 Brassica napus HOM05D004882 ORTHO05D005551 6.4e-17 91.3 71 59.2
BolC1t02498H Brassica oleracea HOM05D004882 ORTHO05D005551 6.4e-17 91.3 71 59.2
BraA01t01961Z Brassica rapa HOM05D004882 ORTHO05D005551 6.4e-17 91.3 71 59.2
Rhsim11G0146400 Rhododendron simsii HOM05D004882 ORTHO05D000089 6.4e-17 91.3 86 54.7
ClCG02G007390 Citrullus lanatus HOM05D004882 ORTHO05D005551 8.4e-17 90.9 105 47.6
arahy.Tifrunner.gnm1.ann1.6ERH6H Arachis hypogaea HOM05D004882 ORTHO05D005551 1.1e-16 90.5 74 55.4
CsaV3_7G007510 Cucumis sativus L. HOM05D004882 ORTHO05D005551 1.1e-16 90.5 89 51.7
AL7G37720 Arabidopsis lyrata HOM05D004882 ORTHO05D005551 1.4e-16 90.1 71 59.2
AT4G17000 Arabidopsis thaliana HOM05D004882 ORTHO05D005551 1.4e-16 90.1 71 59.2
Carub.0007s2442 Capsella rubella HOM05D004882 ORTHO05D005551 1.4e-16 90.1 71 59.2
CARHR223560 Cardamine hirsuta HOM05D004882 ORTHO05D005551 1.9e-16 89.7 72 56.9
Thhalv10024666m.g Eutrema salsugineum HOM05D004882 ORTHO05D005551 1.9e-16 89.7 71 59.2
THA.LOC104807193 Tarenaya hassleriana HOM05D004882 ORTHO05D005551 5.4e-16 88.2 68 58.8
CSS0027559 Camellia sinensis var. sinensis HOM05D004882 ORTHO05D005551 7.1e-16 87.8 72 61.1
Sp7g17190 Schrenkiella parvula HOM05D004882 ORTHO05D005551 9.3e-16 87.4 71 57.7
BcaB04g18391 Brassica carinata HOM05D004882 ORTHO05D005551 3.5e-15 85.5 75 53.3
Lsat_1_v5_gn_5_110520 Lactuca sativa HOM05D004882 ORTHO05D005551 3.5e-15 85.5 80 51.2
ATR0739G125 Amborella trichopoda HOM05D004882 ORTHO05D005551 4.6e-15 85.1 92 47.8
FAN27G0728 Fragaria x ananassa HOM05D004882 ORTHO05D005551 1.3e-14 83.6 113 40.7
THA.LOC104819516 Tarenaya hassleriana HOM05D004882 ORTHO05D005551 2.3e-14 82.8 88 50.0
RcHm_v2.0_Chr6g0246641 Rosa chinensis HOM05D004882 ORTHO05D005551 5.3e-11 71.6 39 76.9
BcaNung00136 Brassica carinata HOM05D004882 ORTHO05D005551 9.0e-11 70.9 71 50.7
Zm00001eb251570 Zea mays HOM05D004882 ORTHO05D005551 9.0e-11 70.9 51 64.7
Nn8g41058 Nelumbo nucifera HOM05D004882 ORTHO05D005551 5.8e-10 68.2 36 83.3
MELO3C018551.2 Cucumis melo HOM05D004882 ORTHO05D005551 7.6e-10 67.8 84 42.9
Rhsim11G0146600 Rhododendron simsii HOM05D004882 ORTHO05D005551 2.1e-07 59.7 35 74.3
Zm00001eb205120 Zea mays HOM05D004882 ORTHO05D005551 6.0e-07 58.2 64 50.0
SEGI_06913 Sequoiadendron giganteum HOM05D004882 ORTHO05D005551 7.9e-07 57.8 61 41.0
BcaC07g38031 Brassica carinata HOM05D004882 ORTHO05D005551 1.3e-06 57.0 42 59.5
RcHm_v2.0_Chr6g0246371 Rosa chinensis HOM05D004882 ORTHO05D005551 3.0e-06 55.8 44 54.5
SEGI_28562 Sequoiadendron giganteum HOM05D004882 ORTHO05D005551 3.0e-06 55.8 43 53.5


User provided reference genes

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