Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019506 Vanilla planifolia HOM05D006030 ORTHO05D007475 3.5e-154 548.5 332 100.0
TAR627G0722 Trochodendron aralioides HOM05D006030 ORTHO05D007475 2.7e-37 160.2 279 39.1
Aqoxy1G01654 Aquilegia oxysepala HOM05D006030 ORTHO05D007475 1.0e-36 158.3 277 45.1
TAR624G0353 Trochodendron aralioides HOM05D006030 ORTHO05D007475 4.3e-35 152.9 297 38.4
CSS0019216 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 1.2e-34 151.4 280 38.2
MBI18_g10587_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 1.6e-34 151.0 285 38.9
Nn4g26650 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.1e-33 148.3 254 40.6
CSS0023088 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 3.1e-33 146.7 281 37.7
Dinv21492 Davidia involucrata HOM05D006030 ORTHO05D007475 1.2e-32 144.8 279 39.1
Ciclev10015995m.g Citrus clementina HOM05D006030 ORTHO05D007475 7.6e-32 142.1 266 38.0
PGR031G1516 Punica granatum HOM05D006030 ORTHO05D007475 9.9e-32 141.7 269 39.0
Cfa000873 Carpinus fangiana HOM05D006030 ORTHO05D007475 4.9e-31 139.4 303 35.6
MBI02_g11375_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 6.4e-31 139.0 273 35.9
Atru.chr10.1031 Acer truncatum HOM05D006030 ORTHO05D007475 1.4e-30 137.9 287 37.3
Actinidia39595 Actinidia chinensis HOM05D006030 ORTHO05D007475 1.4e-30 137.9 296 37.8
Rhsim02G0159700 Rhododendron simsii HOM05D006030 ORTHO05D007475 1.9e-30 137.5 280 38.9
Hma1.2p1_0689F.1_g203740 Hydrangea macrophylla HOM05D006030 ORTHO05D007475 2.4e-30 137.1 282 37.6
Lj2A324T65 Lonicera japonica HOM05D006030 ORTHO05D007475 2.4e-30 137.1 283 36.4
CSS0008742 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 4.2e-30 136.3 281 36.3
Potri.011G091700 Populus trichocarpa HOM05D006030 ORTHO05D007475 1.2e-29 134.8 283 36.7
CiPaw.09G117700 Carya illinoinensis HOM05D006030 ORTHO05D007475 2.1e-29 134.0 284 35.2
Haze_05717 Corylus avellana HOM05D006030 ORTHO05D007475 2.1e-29 134.0 286 35.7
Thecc.02G010100 Theobroma cacao HOM05D006030 ORTHO05D007475 2.1e-29 134.0 242 40.1
MSTRG.14783 Avicennia marina HOM05D006030 ORTHO05D007475 7.8e-29 132.1 293 37.5
FvH4_3g09520 Fragaria vesca HOM05D006030 ORTHO05D007475 7.8e-29 132.1 276 37.3
FAN16G0477 Fragaria x ananassa HOM05D006030 ORTHO05D007475 7.8e-29 132.1 276 37.3
FAN11G1717 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.0e-28 131.7 276 37.3
FAN25G1233 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.3e-28 131.3 276 37.3
Glyma.15G092100 Glycine max HOM05D006030 ORTHO05D007475 1.3e-28 131.3 265 35.8
MD10G1256000 Malus domestica HOM05D006030 ORTHO05D007475 1.3e-28 131.3 275 36.0
Lj1A1167T61 Lonicera japonica HOM05D006030 ORTHO05D007475 1.7e-28 131.0 285 36.1
Manes.15G125900 Manihot esculenta HOM05D006030 ORTHO05D007475 2.3e-28 130.6 280 37.5
Prupe.4G087600 Prunus persica HOM05D006030 ORTHO05D007475 3.9e-28 129.8 274 35.4
Duzib052G0461 Durio zibethinus HOM05D006030 ORTHO05D007475 5.1e-28 129.4 275 36.4
PSO541G2932 Papaver somniferum HOM05D006030 ORTHO05D007475 5.1e-28 129.4 274 35.8
TWI53G0643 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 5.1e-28 129.4 281 34.9
Manes.17G075000 Manihot esculenta HOM05D006030 ORTHO05D007475 8.7e-28 128.6 255 40.4
Nitab4.5_0000315g0160 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.1e-27 128.3 307 36.5
CANSAT35G1388 Cannabis sativa HOM05D006030 ORTHO05D007475 1.5e-27 127.9 292 35.3
Migut.H01344 Erythranthe guttata HOM05D006030 ORTHO05D007475 1.9e-27 127.5 303 36.3
MD05G1060100 Malus domestica HOM05D006030 ORTHO05D007475 1.9e-27 127.5 273 35.9
Eucgr.E02463 Eucalyptus grandis HOM05D006030 ORTHO05D007475 2.5e-27 127.1 229 37.6
TWI09G0666 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 2.5e-27 127.1 282 34.0
FAN21G0577 Fragaria x ananassa HOM05D006030 ORTHO05D007475 3.3e-27 126.7 276 37.0
Peaxi162Scf00045g00235 Petunia axillaris HOM05D000253 ORTHO05D000149 3.3e-27 126.7 297 35.7
Nitab4.5_0008802g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 5.6e-27 125.9 305 36.1
PSO541G2924 Papaver somniferum HOM05D006030 ORTHO05D007475 5.6e-27 125.9 287 35.2
Ah.09g232450 Amaranthus hybridus HOM05D006030 ORTHO05D007475 7.3e-27 125.6 249 35.7
EL10Ac8g19610 Beta vulgaris HOM05D006030 ORTHO05D007475 7.3e-27 125.6 268 35.4
ClCG03G006430 Citrullus lanatus HOM05D006030 ORTHO05D007475 9.6e-27 125.2 286 33.9
CsaV3_1G036960 Cucumis sativus L. HOM05D006030 ORTHO05D007475 9.6e-27 125.2 283 33.9
AUR62030127 Chenopodium quinoa HOM05D006030 ORTHO05D007475 1.2e-26 124.8 250 36.8
PSO675G3639 Papaver somniferum HOM05D006030 ORTHO05D007475 1.2e-26 124.8 274 37.2
Hund21555 Selenicereus undatus HOM05D006030 ORTHO05D007475 2.8e-26 123.6 257 38.5
Sc05g0005830 Simmondsia chinensis HOM05D006030 ORTHO05D007475 2.8e-26 123.6 269 36.8
Thhalv10029201m.g Eutrema salsugineum HOM05D006030 ORTHO05D007475 3.6e-26 123.2 292 33.9
VMungo0540G2189 Vigna mungo HOM05D006030 ORTHO05D007475 3.6e-26 123.2 260 33.8
AUR62002659 Chenopodium quinoa HOM05D006030 ORTHO05D007475 4.7e-26 122.9 249 36.1
Duzib132G1046 Durio zibethinus HOM05D006030 ORTHO05D007475 4.7e-26 122.9 277 33.6
Lj6g0008094 Lotus japonicus HOM05D006030 ORTHO05D007475 4.7e-26 122.9 264 35.6
Sabra11G0085900 Salix brachista HOM05D006030 ORTHO05D007475 4.7e-26 122.9 275 35.6
THA.LOC104806979 Tarenaya hassleriana HOM05D006030 ORTHO05D007475 6.2e-26 122.5 273 34.8
Cc09_g08600 Coffea canephora HOM05D006030 ORTHO05D007475 8.1e-26 122.1 256 39.5
Psat1g191320 Pisum sativum HOM05D006030 ORTHO05D007475 1.1e-25 121.7 262 33.6
QL05p054330 Quercus lobata HOM05D006030 ORTHO05D007475 1.1e-25 121.7 268 33.6
MELO3C002779.2 Cucumis melo HOM05D006030 ORTHO05D007475 1.4e-25 121.3 279 34.1
PSO675G1541 Papaver somniferum HOM05D006030 ORTHO05D007475 1.4e-25 121.3 281 34.2
Sed0012497 Sechium edule HOM05D006030 ORTHO05D007475 1.4e-25 121.3 267 35.6
Lsat_1_v5_gn_1_116040 Lactuca sativa HOM05D006030 ORTHO05D007475 1.8e-25 120.9 259 36.7
TPR.G26249 Trifolium pratense HOM05D006030 ORTHO05D007475 1.8e-25 120.9 269 32.7
Ca_00520_v3 Cicer arietinum L. HOM05D006030 ORTHO05D007475 2.4e-25 120.6 242 34.3
DCAR_007858 Daucus carota HOM05D006030 ORTHO05D007475 2.4e-25 120.6 262 36.3
Carub.0006s3344 Capsella rubella HOM05D006030 ORTHO05D007475 5.3e-25 119.4 266 35.0
RcHm_v2.0_Chr5g0015101 Rosa chinensis HOM05D006030 ORTHO05D007475 5.3e-25 119.4 277 36.1
Sed0007526 Sechium edule HOM05D006030 ORTHO05D007475 5.3e-25 119.4 247 34.4
CARHR252040 Cardamine hirsuta HOM05D006030 ORTHO05D007475 6.9e-25 119.0 268 34.3
Glyma.13G220300 Glycine max HOM05D006030 ORTHO05D007475 6.9e-25 119.0 266 34.2
COL.COLO4_17663 Corchorus olitorius HOM05D006030 ORTHO05D007475 9.0e-25 118.6 290 32.1
AL6G49160 Arabidopsis lyrata HOM05D006030 ORTHO05D007475 1.2e-24 118.2 265 35.1
Sp6g03610 Schrenkiella parvula HOM05D006030 ORTHO05D007475 1.5e-24 117.9 277 34.7
Aa31LG9G8890 Aethionema arabicum HOM05D006030 ORTHO05D007475 2.0e-24 117.5 277 32.9
SalBow7G1462 Salvia bowleyana HOM05D006030 ORTHO05D007475 2.0e-24 117.5 257 36.2
SalBow7G3121 Salvia bowleyana HOM05D006030 ORTHO05D007475 2.0e-24 117.5 257 36.2
Phvul.006G167100 Phaseolus vulgaris HOM05D006030 ORTHO05D007475 2.6e-24 117.1 259 32.4
Medtr2g018890 Medicago truncatula HOM05D006030 ORTHO05D007475 7.6e-24 115.5 260 31.9
Peaxi162Scf00333g00215 Petunia axillaris HOM05D006030 ORTHO05D007475 7.6e-24 115.5 256 34.8
BcaB01g01909 Brassica carinata HOM05D006030 ORTHO05D007475 1.3e-23 114.8 277 33.6
DCAR_027876 Daucus carota HOM05D006030 ORTHO05D007475 1.3e-23 114.8 246 35.4
AT4G03620 Arabidopsis thaliana HOM05D006030 ORTHO05D007475 3.8e-23 113.2 289 33.2
BcaC04g23958 Brassica carinata HOM05D006030 ORTHO05D007475 4.9e-23 112.8 278 34.5
C09p02960 Brassica napus HOM05D006030 ORTHO05D007475 4.9e-23 112.8 278 34.5
BolC9t53223H Brassica oleracea HOM05D006030 ORTHO05D007475 4.9e-23 112.8 278 34.5
Lalb_Chr15g0086701 Lupinus albus HOM05D006030 ORTHO05D007475 6.4e-23 112.5 265 33.6
Solyc08g023270.3 Solanum lycopersicum HOM05D006030 ORTHO05D007475 1.1e-22 111.7 306 35.3
Sopen08g008180 Solanum pennellii HOM05D006030 ORTHO05D007475 1.1e-22 111.7 306 35.3
Sopen02g005930 Solanum pennellii HOM05D006030 ORTHO05D007475 1.4e-22 111.3 274 33.2
BraA09t35933Z Brassica rapa HOM05D006030 ORTHO05D007475 1.9e-22 110.9 279 34.4
Lalb_Chr20g0117731 Lupinus albus HOM05D006030 ORTHO05D007475 1.9e-22 110.9 294 30.6
SalBow8G3821 Salvia bowleyana HOM05D006030 ORTHO05D007475 1.9e-22 110.9 283 34.6
A09p02880 Brassica napus HOM05D006030 ORTHO05D007475 2.4e-22 110.5 279 33.7
Solyc02g021450.2 Solanum lycopersicum HOM05D006030 ORTHO05D007475 7.1e-22 109.0 274 32.5
PGSC0003DMG400005380 Solanum tuberosum HOM05D006030 ORTHO05D007475 7.1e-22 109.0 287 35.5
CAN.G36.30 Capsicum annuum HOM05D006030 ORTHO05D007475 1.2e-21 108.2 281 33.1
ECA236G5152 Erigeron canadensis HOM05D006030 ORTHO05D007475 2.1e-21 107.5 261 34.9
DCAR_003876 Daucus carota HOM05D006030 ORTHO05D007475 2.7e-21 107.1 274 32.5
HanXRQChr04g0112111 Helianthus annuus HOM05D006030 ORTHO05D007475 6.0e-21 105.9 258 32.6
Nitab4.5_0002900g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 7.8e-21 105.5 261 32.6
HanXRQChr15g0481561 Helianthus annuus HOM05D006030 ORTHO05D007475 1.0e-20 105.1 284 32.7
GSVIVG01021577001 Vitis vinifera HOM05D006030 ORTHO05D007475 1.0e-20 105.1 220 35.5
Nitab4.5_0000717g0050 Nicotiana tabacum HOM05D006030 ORTHO05D007475 3.0e-20 103.6 256 32.0
Migut.M01870 Erythranthe guttata HOM05D006030 ORTHO05D007475 1.9e-19 100.9 141 46.8
Nn3g20281 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.9e-19 100.9 222 36.0
PGSC0003DMG400031336 Solanum tuberosum HOM05D006030 ORTHO05D007475 4.3e-19 99.8 274 31.0
Lalb_Chr18g0055221 Lupinus albus HOM05D006030 ORTHO05D007475 5.6e-19 99.4 258 30.2
MSTRG.13261 Avicennia marina HOM05D006030 ORTHO05D007475 9.6e-19 98.6 275 34.5
arahy.Tifrunner.gnm1.ann1.IB7BS1 Arachis hypogaea HOM05D006030 ORTHO05D007475 1.8e-17 94.4 285 31.6
arahy.Tifrunner.gnm1.ann1.Z0KP5S Arachis hypogaea HOM05D006030 ORTHO05D007475 1.8e-17 94.4 285 31.6
SGA_v2.0_scaffold51G18644 Striga asiatica HOM05D006030 ORTHO05D007475 2.4e-17 94.0 250 32.0
Lsat_1_v5_gn_7_32280 Lactuca sativa HOM05D006030 ORTHO05D007475 3.1e-17 93.6 286 30.8
ATR0626G038 Amborella trichopoda HOM05D006030 ORTHO05D007475 1.3e-15 88.2 253 31.6
arahy.Tifrunner.gnm1.ann1.TN2AI9 Arachis hypogaea HOM05D006030 ORTHO05D007475 2.1e-13 80.9 262 28.2
arahy.Tifrunner.gnm1.ann1.DKT922 Arachis hypogaea HOM05D006030 ORTHO05D007475 2.7e-13 80.5 262 28.2
Duzib248G1648 Durio zibethinus HOM05D006030 ORTHO05D007475 3.9e-12 76.6 89 44.9
Peaxi162Scf00333g00214 Petunia axillaris HOM05D006030 ORTHO05D007475 3.3e-11 73.6 76 52.6
SEGI_26103 Sequoiadendron giganteum HOM05D006030 ORTHO05D007475 2.2e-07 60.8 142 34.5
unitig_37.g12083 Utricularia gibba HOM05D006030 ORTHO05D007475 5.5e-06 56.2 194 28.9


User provided reference genes

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