Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.6e-74 282.0 143 100.0
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.8e-36 155.6 92 80.4
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 2.8e-36 155.6 92 82.6
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 3.1e-35 152.1 96 75.0
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 4.1e-35 151.8 92 78.3
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 4.1e-35 151.8 92 78.3
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 4.1e-35 151.8 92 78.3
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 5.4e-35 151.4 90 80.0
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 7.0e-35 151.0 92 78.3
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 7.0e-35 151.0 93 78.5
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.2e-34 150.2 93 75.3
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.6e-34 149.8 92 77.2
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.6e-34 149.8 92 77.2
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 2.0e-34 149.4 92 77.2
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 2.0e-34 149.4 92 76.1
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.7e-34 149.1 91 76.9
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 2.7e-34 149.1 90 77.8
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 5.9e-34 147.9 90 77.8
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 5.9e-34 147.9 92 77.2
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 5.9e-34 147.9 92 77.2
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 7.8e-34 147.5 95 75.8
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 7.8e-34 147.5 92 76.1
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 7.8e-34 147.5 93 75.3
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 1.3e-33 146.7 91 75.8
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.7e-33 146.4 92 75.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 2.9e-33 145.6 91 74.7
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 3.8e-33 145.2 90 76.7
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 3.8e-33 145.2 90 71.1
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.8e-33 145.2 93 74.2
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 3.8e-33 145.2 101 71.3
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 5.0e-33 144.8 92 73.9
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 5.0e-33 144.8 92 73.9
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 5.0e-33 144.8 92 73.9
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 6.6e-33 144.4 92 75.0
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 8.6e-33 144.1 97 70.1
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 8.6e-33 144.1 91 74.7
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 8.6e-33 144.1 90 76.7
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 8.6e-33 144.1 90 76.7
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 1.1e-32 143.7 90 75.6
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.5e-32 143.3 92 73.9
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.9e-32 142.9 93 73.1
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.5e-32 142.5 91 75.8
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 2.5e-32 142.5 91 73.6
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.5e-32 142.5 91 71.4
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.5e-32 142.5 91 73.6
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 4.3e-32 141.7 91 72.5
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 4.3e-32 141.7 90 75.6
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 4.3e-32 141.7 90 73.3
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 5.6e-32 141.4 90 74.4
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 7.3e-32 141.0 91 74.7
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 7.3e-32 141.0 91 73.6
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 7.3e-32 141.0 91 73.6
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 9.5e-32 140.6 95 71.6
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.2e-31 140.2 91 73.6
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.6e-31 139.8 104 67.3
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.6e-31 139.8 90 72.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.1e-31 139.4 90 73.3
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 2.1e-31 139.4 92 72.8
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.1e-31 139.4 90 73.3
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.8e-31 139.0 87 74.7
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 2.8e-31 139.0 104 66.3
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 2.8e-31 139.0 90 72.2
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.8e-31 139.0 92 72.8
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 3.6e-31 138.7 90 72.2
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 3.6e-31 138.7 91 70.3
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.6e-31 138.7 90 73.3
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 4.7e-31 138.3 104 66.3
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.7e-31 138.3 91 72.5
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.7e-31 138.3 91 72.5
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 4.7e-31 138.3 91 73.6
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 8.0e-31 137.5 90 70.0
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 1.4e-30 136.7 91 71.4
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 3.0e-30 135.6 91 72.5
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 4.0e-30 135.2 82 75.6
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.2e-30 134.8 92 71.7
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 8.9e-30 134.0 91 71.4
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-29 133.7 91 69.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.2e-29 133.7 90 67.8
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.2e-29 133.7 95 67.4
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 3.4e-29 132.1 90 70.0
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 5.8e-29 131.3 102 64.7
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 7.5e-29 131.0 91 65.9
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 7.5e-29 131.0 91 70.3
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.7e-28 129.8 91 67.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.2e-28 129.4 91 69.2
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 2.9e-28 129.0 98 69.4
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 3.7e-28 128.6 90 66.7
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.4e-27 126.7 94 64.9
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 1.8e-27 126.3 81 72.8
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 2.0e-26 122.9 95 64.2
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 2.7e-26 122.5 81 72.8
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 1.0e-25 120.6 123 51.2
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 1.3e-25 120.2 117 56.4
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.3e-25 119.4 81 70.4
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 3.9e-25 118.6 79 69.6
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 6.6e-25 117.9 90 63.3
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 8.6e-25 117.5 94 62.8
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 8.6e-25 117.5 90 62.2
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.1e-24 117.1 87 60.9
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.9e-24 116.3 81 66.7
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 2.5e-24 115.9 126 50.0
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 6.8e-22 107.8 80 63.8
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.5e-21 104.4 81 66.7
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 2.2e-20 102.8 77 68.8
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 4.9e-20 101.7 83 59.0
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.4e-19 100.1 86 53.5
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 3.9e-17 92.0 90 48.9
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 1.5e-16 90.1 48 87.5
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.5e-16 90.1 70 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.5e-16 89.4 74 55.4
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 8.1e-15 84.3 45 86.7
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 8.9e-14 80.9 46 84.8
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 9.2e-11 70.9 48 72.9
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 3.9e-09 65.5 48 58.3
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.9e-08 63.2 50 58.0
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 7.3e-08 61.2 45 64.4
MCO16G157 Micromonas commoda HOM05D006748 ORTHO05D008553 2.1e-07 59.7 86 32.6


User provided reference genes

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