Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019405 Vanilla planifolia HOM05D000610 ORTHO05D004774 4.0e-218 761.1 388 100.0
HPP92_019408 Vanilla planifolia HOM05D000610 ORTHO05D004774 9.3e-191 670.2 347 98.3
Nn7g36312 Nelumbo nucifera HOM05D000610 ORTHO05D004774 2.7e-137 492.7 347 68.9
MBI19_g13038_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 7.8e-137 491.1 344 71.2
TAR633G1531 Trochodendron aralioides HOM05D000610 ORTHO05D004774 1.0e-136 490.7 343 70.0
Manes.09G020400 Manihot esculenta HOM05D000610 ORTHO05D004774 2.5e-135 486.1 346 68.2
Phvul.001G131150 Phaseolus vulgaris HOM05D000610 ORTHO05D004774 7.3e-135 484.6 333 69.4
Potri.006G049300 Populus trichocarpa HOM05D000610 ORTHO05D004774 7.3e-135 484.6 333 69.4
Glyma.03G136000 Glycine max HOM05D000610 ORTHO05D004774 1.2e-134 483.8 346 67.9
Dinv18665 Davidia involucrata HOM05D000610 ORTHO05D004774 2.8e-134 482.6 347 68.3
FAN02G4008 Fragaria x ananassa HOM05D000610 ORTHO05D004774 2.8e-134 482.6 338 68.6
CSS0013319 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 6.1e-134 481.5 330 70.0
Cpa.g.sc224.8 Carica papaya HOM05D000610 ORTHO05D004774 8.0e-134 481.1 346 66.8
Prupe.7G058100 Prunus persica HOM05D000610 ORTHO05D004774 8.0e-134 481.1 345 68.1
Aqoxy1G00231 Aquilegia oxysepala HOM05D000610 ORTHO05D004774 1.0e-133 480.7 344 69.8
Cfa016807 Carpinus fangiana HOM05D000610 ORTHO05D004774 1.0e-133 480.7 333 68.5
FvH4_6g24100 Fragaria vesca HOM05D000610 ORTHO05D004774 1.0e-133 480.7 346 67.3
Gohir.D01G120000 Gossypium hirsutum HOM05D000610 ORTHO05D004774 1.8e-133 479.9 346 66.8
Gorai.002G146400 Gossypium raimondii HOM05D000610 ORTHO05D004774 1.8e-133 479.9 346 66.8
FAN09G1277 Fragaria x ananassa HOM05D000610 ORTHO05D004774 4.0e-133 478.8 346 67.1
TAR636G1590 Trochodendron aralioides HOM05D000610 ORTHO05D004774 4.0e-133 478.8 338 68.3
PSO384G3904 Papaver somniferum HOM05D000610 ORTHO05D004774 5.2e-133 478.4 328 69.5
Eucgr.A02339 Eucalyptus grandis HOM05D000610 ORTHO05D004774 1.2e-132 477.2 345 67.5
TPR.G3701 Trifolium pratense HOM05D000610 ORTHO05D004774 1.2e-132 477.2 330 70.0
Gohir.A01G131111 Gossypium hirsutum HOM05D000610 ORTHO05D004774 2.0e-132 476.5 346 66.5
RcHm_v2.0_Chr3g0482761 Rosa chinensis HOM05D000610 ORTHO05D004774 2.6e-132 476.1 346 67.1
Actinidia39216 Actinidia chinensis HOM05D000610 ORTHO05D004774 3.4e-132 475.7 337 69.7
Sc13g0001650 Simmondsia chinensis HOM05D000610 ORTHO05D004774 3.4e-132 475.7 336 68.5
arahy.Tifrunner.gnm1.ann1.50CUSQ Arachis hypogaea HOM05D000610 ORTHO05D004774 4.4e-132 475.3 345 67.2
PGR004G2234 Punica granatum HOM05D000610 ORTHO05D004774 4.4e-132 475.3 346 67.3
CiPaw.09G038900 Carya illinoinensis HOM05D000610 ORTHO05D004774 3.7e-131 472.2 346 64.7
MD12G1079400 Malus domestica HOM05D000610 ORTHO05D004774 3.7e-131 472.2 340 66.8
Medtr7g091380 Medicago truncatula HOM05D000610 ORTHO05D004774 4.9e-131 471.9 344 67.4
Lj1g0005409 Lotus japonicus HOM05D000610 ORTHO05D004774 6.4e-131 471.5 346 67.1
Duzib093G2237 Durio zibethinus HOM05D000610 ORTHO05D004774 8.3e-131 471.1 346 65.0
Lsat_1_v5_gn_9_30620 Lactuca sativa HOM05D000610 ORTHO05D004774 1.4e-130 470.3 338 66.9
Thecc.05G148900 Theobroma cacao HOM05D000610 ORTHO05D004774 1.4e-130 470.3 346 65.3
CANSAT80G2124 Cannabis sativa HOM05D000610 ORTHO05D004774 1.9e-130 469.9 333 67.3
MELO3C023103.2 Cucumis melo HOM05D000610 ORTHO05D004774 1.9e-130 469.9 328 68.9
TWI53G1231 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 2.4e-130 469.5 344 66.6
Lalb_Chr25g0287161 Lupinus albus HOM05D000610 ORTHO05D004774 3.2e-130 469.2 346 67.3
ClCG04G003390 Citrullus lanatus HOM05D000610 ORTHO05D004774 7.0e-130 468.0 328 68.0
CsaV3_4G011860 Cucumis sativus L. HOM05D000610 ORTHO05D004774 9.2e-130 467.6 328 68.6
Duzib128G1628 Durio zibethinus HOM05D000610 ORTHO05D004774 9.2e-130 467.6 347 65.7
TWI74G1635 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 9.2e-130 467.6 344 66.3
Atru.chr1.1122 Acer truncatum HOM05D000610 ORTHO05D004774 1.2e-129 467.2 333 66.4
Atru.chr1.1123 Acer truncatum HOM05D000610 ORTHO05D004774 1.2e-129 467.2 333 66.4
AUR62026051 Chenopodium quinoa HOM05D000610 ORTHO05D004774 1.6e-129 466.8 338 67.8
Ah.04g151590 Amaranthus hybridus HOM05D000610 ORTHO05D004774 2.0e-129 466.5 336 68.5
HanXRQChr10g0300621 Helianthus annuus HOM05D000610 ORTHO05D004774 2.7e-129 466.1 339 67.0
EL10Ac3g07101 Beta vulgaris HOM05D000610 ORTHO05D004774 3.5e-129 465.7 343 66.8
Cc06_g17650 Coffea canephora HOM05D000610 ORTHO05D004774 6.0e-129 464.9 346 65.3
Oeu023112.1 Olea europaea HOM05D000610 ORTHO05D004774 6.0e-129 464.9 330 67.3
Thhalv10016127m.g Eutrema salsugineum HOM05D000610 ORTHO05D004774 1.3e-128 463.8 351 64.7
Sp4g23940 Schrenkiella parvula HOM05D000610 ORTHO05D004774 1.7e-128 463.4 351 64.7
ECA247G3032 Erigeron canadensis HOM05D000610 ORTHO05D004774 3.0e-128 462.6 345 66.1
SalBow6G0358 Salvia bowleyana HOM05D000610 ORTHO05D004774 3.9e-128 462.2 345 64.1
SalBow6G6580 Salvia bowleyana HOM05D000610 ORTHO05D004774 3.9e-128 462.2 345 64.1
ATR0188G019 Amborella trichopoda HOM05D000610 ORTHO05D004774 5.0e-128 461.8 343 65.3
COL.COLO4_08236 Corchorus olitorius HOM05D000610 ORTHO05D004774 6.6e-128 461.5 346 64.5
THA.LOC104824436 Tarenaya hassleriana HOM05D000610 ORTHO05D004774 6.6e-128 461.5 333 66.4
CAN.G676.30 Capsicum annuum HOM05D000610 ORTHO05D004774 1.1e-127 460.7 333 65.5
Migut.J01749 Erythranthe guttata HOM05D000610 ORTHO05D004774 1.2e-126 457.2 345 63.8
Sed0024936 Sechium edule HOM05D000610 ORTHO05D004774 1.2e-126 457.2 344 65.7
Haze_19838 Corylus avellana HOM05D000610 ORTHO05D004774 1.6e-126 456.8 371 60.6
BolC3t15161H Brassica oleracea HOM05D000610 ORTHO05D004774 2.1e-126 456.4 351 63.5
Ciclev10004128m.g Citrus clementina HOM05D000610 ORTHO05D004774 2.8e-126 456.1 346 63.3
CARHR136790 Cardamine hirsuta HOM05D000610 ORTHO05D004774 4.7e-126 455.3 344 64.0
C03p27900 Brassica napus HOM05D000610 ORTHO05D004774 8.0e-126 454.5 351 63.8
AL4G40000 Arabidopsis lyrata HOM05D000610 ORTHO05D004774 1.4e-125 453.8 351 62.7
Aa31LG1G23710 Aethionema arabicum HOM05D000610 ORTHO05D004774 1.8e-125 453.4 351 62.7
Carub.0004s2397 Capsella rubella HOM05D000610 ORTHO05D004774 1.8e-125 453.4 351 63.2
AT2G41700 Arabidopsis thaliana HOM05D000610 ORTHO05D004774 2.3e-125 453.0 351 63.0
A03p23380 Brassica napus HOM05D000610 ORTHO05D004774 4.0e-125 452.2 351 62.7
BraA03t11555Z Brassica rapa HOM05D000610 ORTHO05D004774 4.0e-125 452.2 351 62.7
SGA_v2.0_scaffold69G23121 Striga asiatica HOM05D000610 ORTHO05D004774 4.0e-125 452.2 351 63.8
Solyc04g015970.3 Solanum lycopersicum HOM05D000610 ORTHO05D004774 6.8e-125 451.4 338 63.9
MSTRG.6422 Avicennia marina HOM05D000610 ORTHO05D004774 1.5e-124 450.3 340 64.7
Psat3g072960 Pisum sativum HOM05D000610 ORTHO05D004774 1.5e-124 450.3 359 63.2
Sopen04g007980 Solanum pennellii HOM05D000610 ORTHO05D004774 1.5e-124 450.3 338 63.9
Lju124C43G3 Lonicera japonica HOM05D000610 ORTHO05D004774 4.1e-122 442.2 340 63.8
SMO266G0031 Selaginella moellendorffii HOM05D000610 ORTHO05D004774 2.7e-121 439.5 335 62.7
GSVIVG01033258001 Vitis vinifera HOM05D000610 ORTHO05D004774 1.7e-120 436.8 347 63.1
FAN14G3175 Fragaria x ananassa HOM05D000610 ORTHO05D004774 1.1e-117 427.6 477 48.8
Peaxi162Scf00130g00325 Petunia axillaris HOM05D000610 ORTHO05D004774 1.8e-117 426.8 333 62.2
vmacro07837 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 1.8e-117 426.8 354 61.3
AUR62024461 Chenopodium quinoa HOM05D000610 ORTHO05D004774 1.1e-114 417.5 338 62.7
arahy.Tifrunner.gnm1.ann1.LF6SQW Arachis hypogaea HOM05D000610 ORTHO05D004774 1.9e-103 380.2 273 67.8
Nitab4.5_0000586g0130 Nicotiana tabacum HOM05D000610 ORTHO05D004774 6.9e-101 371.7 333 57.1
DCAR_020494 Daucus carota HOM05D000610 ORTHO05D004774 1.9e-98 363.6 262 66.8
unitig_8.g3504 Utricularia gibba HOM05D000610 ORTHO05D004774 1.6e-94 350.5 298 59.1
Rhsim03G0027100 Rhododendron simsii HOM05D000610 ORTHO05D004774 6.2e-94 348.6 548 40.3
arahy.Tifrunner.gnm1.ann1.624G49 Arachis hypogaea HOM05D000610 ORTHO05D004774 4.0e-77 292.7 196 69.4
CDE05G2711 Ceratophyllum demersum HOM05D000610 ORTHO05D004774 2.6e-52 210.3 147 66.0
Psat2g105960 Pisum sativum HOM05D000610 ORTHO05D037361 8.5e-35 152.1 112 64.3
Psat0s1374g0040 Pisum sativum HOM05D001675 ORTHO05D037361 1.0e-32 145.2 112 61.6
Psat0s5300g0040 Pisum sativum HOM05D001675 ORTHO05D037361 1.0e-32 145.2 112 61.6
AagrBONN_evm.TU.Sc2ySwM_362.1400 Anthoceros agrestis HOM05D000610 ORTHO05D004774 1.3e-27 128.3 351 27.4
Pp3c5_21220 Physcomitrium patens HOM05D000610 ORTHO05D004774 1.6e-25 121.3 374 25.9
CBR_g38217 Chara braunii HOM05D000610 ORTHO05D004774 3.0e-24 117.1 352 27.8
Pp3c4_27650 Physcomitrium patens HOM05D000610 ORTHO05D004774 9.8e-23 112.1 167 34.7
Mapoly0049s0026 Marchantia polymorpha HOM05D000610 ORTHO05D004774 2.9e-22 110.5 169 35.5
Lsat_1_v5_gn_2_88940 Lactuca sativa HOM05D000610 ORTHO05D230314 2.4e-21 107.5 105 53.3
MCO14G501 Micromonas commoda HOM05D000610 ORTHO05D004774 1.8e-16 91.3 324 25.6
Actinidia09319 Actinidia chinensis HOM05D000610 ORTHO05D004774 2.3e-16 90.9 109 48.6
PRCOL_00006093 Prasinoderma coloniale HOM05D000610 ORTHO05D004774 5.8e-15 86.3 172 32.0
MCO16G651 Micromonas commoda HOM05D000610 ORTHO05D004774 1.2e-12 78.6 355 22.5
Psat6g040440 Pisum sativum HOM05D000610 ORTHO05D004774 3.3e-10 70.5 73 50.7
Cre03.g151400 Chlamydomonas reinhardtii HOM05D000610 ORTHO05D004774 5.2e-08 63.2 142 31.0
Nitab4.5_0002328g0010 Nicotiana tabacum HOM05D000610 ORTHO05D004774 2.0e-07 61.2 45 68.9


User provided reference genes

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