Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019394 Vanilla planifolia HOM05D005364 ORTHO05D006554 2.6e-138 495.4 249 100.0
HPP92_019395 Vanilla planifolia HOM05D005364 ORTHO05D006554 1.5e-120 436.4 220 99.1
GSVIVG01010009001 Vitis vinifera HOM05D005364 ORTHO05D006554 5.2e-70 268.5 229 57.2
Thecc.08G141100 Theobroma cacao HOM05D005364 ORTHO05D006554 2.2e-68 263.1 260 53.8
Dinv25792 Davidia involucrata HOM05D005364 ORTHO05D006554 1.1e-67 260.8 228 58.3
CDE02G4564 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 1.4e-67 260.4 219 60.3
Cfa018384 Carpinus fangiana HOM05D005364 ORTHO05D006554 1.9e-67 260.0 229 55.9
Haze_17688 Corylus avellana HOM05D005364 ORTHO05D006554 1.9e-67 260.0 229 55.9
Hma1.2p1_0107F.1_g051330 Hydrangea macrophylla HOM05D005364 ORTHO05D006554 1.9e-67 260.0 229 57.6
Duzib041G0781 Durio zibethinus HOM05D005364 ORTHO05D006554 3.2e-67 259.2 263 51.7
Prupe.8G016300 Prunus persica HOM05D005364 ORTHO05D006554 5.4e-67 258.5 222 56.8
MBI03_g35292_MAGBIO Magnolia biondii HOM05D005364 ORTHO05D006554 9.3e-67 257.7 223 59.2
Actinidia03441 Actinidia chinensis HOM05D005364 ORTHO05D006554 2.1e-66 256.5 229 57.6
QL09p029051 Quercus lobata HOM05D005364 ORTHO05D006554 2.1e-66 256.5 229 56.3
COL.COLO4_33812 Corchorus olitorius HOM05D005364 ORTHO05D006554 6.0e-66 255.0 256 52.7
TAR628G1468 Trochodendron aralioides HOM05D005364 ORTHO05D006554 1.7e-65 253.4 229 55.5
Eucgr.F02755 Eucalyptus grandis HOM05D005364 ORTHO05D006554 2.3e-65 253.1 219 57.1
Potri.005G186600 Populus trichocarpa HOM05D005364 ORTHO05D006554 2.3e-65 253.1 228 57.0
Gorai.005G083600 Gossypium raimondii HOM05D005364 ORTHO05D006554 3.0e-65 252.7 223 57.4
Nn5g28547 Nelumbo nucifera HOM05D005364 ORTHO05D006554 3.9e-65 252.3 232 56.9
Sabra05G0142500 Salix brachista HOM05D005364 ORTHO05D006554 5.1e-65 251.9 228 56.6
CSS0030633 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 6.6e-65 251.5 229 55.9
Sed0004836 Sechium edule HOM05D005364 ORTHO05D006554 1.1e-64 250.8 252 52.8
TWI34G0076 Tripterygium wilfordii HOM05D005364 ORTHO05D006554 1.5e-64 250.4 226 53.5
PSO675G4293 Papaver somniferum HOM05D005364 ORTHO05D006554 1.9e-64 250.0 228 55.7
Gohir.D02G074200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 2.5e-64 249.6 223 56.5
Atru.chr13.1665 Acer truncatum HOM05D005364 ORTHO05D006554 3.3e-64 249.2 220 55.5
Migut.C01101 Erythranthe guttata HOM05D005364 ORTHO05D006554 3.3e-64 249.2 231 55.8
Aqoxy6G00357 Aquilegia oxysepala HOM05D005364 ORTHO05D006554 5.6e-64 248.4 226 55.3
PSO541G2378 Papaver somniferum HOM05D005364 ORTHO05D006554 7.3e-64 248.1 228 55.3
SGA_v2.0_scaffold24G10388 Striga asiatica HOM05D005364 ORTHO05D006554 7.3e-64 248.1 222 56.3
Lj1g0018455 Lotus japonicus HOM05D005364 ORTHO05D006554 2.1e-63 246.5 229 53.3
Manes.18G085705 Manihot esculenta HOM05D005364 ORTHO05D006554 2.1e-63 246.5 227 54.6
SalBow7G3071 Salvia bowleyana HOM05D005364 ORTHO05D006554 2.8e-63 246.1 253 50.6
CAN.G657.4 Capsicum annuum HOM05D005364 ORTHO05D006554 3.6e-63 245.7 229 52.8
Sc15g0007440 Simmondsia chinensis HOM05D001552 ORTHO05D003294 3.6e-63 245.7 227 55.9
Zm00001eb138630 Zea mays HOM05D005364 ORTHO05D006554 3.6e-63 245.7 220 57.3
Sopen04g026510 Solanum pennellii HOM05D005364 ORTHO05D006554 6.2e-63 245.0 227 52.9
arahy.Tifrunner.gnm1.ann1.3V9M2M Arachis hypogaea HOM05D005364 ORTHO05D006554 8.1e-63 244.6 228 54.4
MD05G1011300 Malus domestica HOM05D005364 ORTHO05D006554 8.1e-63 244.6 222 55.4
VMungo0647G2252 Vigna mungo HOM05D005364 ORTHO05D006554 1.1e-62 244.2 224 53.6
Ciclev10000720m.g Citrus clementina HOM05D005364 ORTHO05D006554 1.4e-62 243.8 228 53.9
MELO3C010582.2 Cucumis melo HOM05D005364 ORTHO05D006554 1.4e-62 243.8 226 54.9
HPP92_021466 Vanilla planifolia HOM05D005364 ORTHO05D006554 1.4e-62 243.8 227 57.3
Phvul.001G064400 Phaseolus vulgaris HOM05D005364 ORTHO05D006554 1.8e-62 243.4 229 52.0
Solyc04g064560.4 Solanum lycopersicum HOM05D005364 ORTHO05D006554 1.8e-62 243.4 227 52.9
CiPaw.15G022800 Carya illinoinensis HOM05D005364 ORTHO05D006554 2.4e-62 243.0 229 53.3
MD10G1011100 Malus domestica HOM05D005364 ORTHO05D006554 2.4e-62 243.0 222 54.5
CsaV3_6G035590 Cucumis sativus L. HOM05D005364 ORTHO05D006554 3.1e-62 242.7 226 54.9
Lj4C689G10 Lonicera japonica HOM05D005364 ORTHO05D006554 3.1e-62 242.7 210 59.0
CSS0018960 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 4.0e-62 242.3 229 55.5
Nitab4.5_0000174g0280 Nicotiana tabacum HOM05D005364 ORTHO05D006554 5.3e-62 241.9 229 53.3
CSS0048679 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 9.0e-62 241.1 229 55.0
CANSAT25G0570 Cannabis sativa HOM05D005364 ORTHO05D006554 9.0e-62 241.1 225 54.2
HanXRQChr15g0484621 Helianthus annuus HOM05D005364 ORTHO05D006554 9.0e-62 241.1 220 55.5
Cc10_g13140 Coffea canephora HOM05D005364 ORTHO05D006554 1.2e-61 240.7 230 53.9
Peaxi162Scf00066g01936 Petunia axillaris HOM05D005364 ORTHO05D006554 2.6e-61 239.6 220 52.7
ATR0138G016 Amborella trichopoda HOM05D005364 ORTHO05D006554 3.4e-61 239.2 224 54.5
MSTRG.1383 Avicennia marina HOM05D005364 ORTHO05D006554 4.5e-61 238.8 232 53.9
Glyma.14G119200 Glycine max HOM05D005364 ORTHO05D006554 5.8e-61 238.4 222 52.7
RcHm_v2.0_Chr6g0277571 Rosa chinensis HOM05D005364 ORTHO05D006554 5.8e-61 238.4 220 55.0
Zm00001eb409200 Zea mays HOM05D005364 ORTHO05D006554 1.3e-60 237.3 220 55.9
ClCG08G002730 Citrullus lanatus HOM05D005364 ORTHO05D006554 3.8e-60 235.7 221 54.8
Psat6g039520 Pisum sativum HOM05D005364 ORTHO05D006554 3.8e-60 235.7 230 53.5
Lalb_Chr25g0281671 Lupinus albus HOM05D005364 ORTHO05D006554 4.9e-60 235.3 228 51.3
Lsat_1_v5_gn_9_124401 Lactuca sativa HOM05D005364 ORTHO05D006554 1.9e-59 233.4 226 52.2
Ah.05g169340 Amaranthus hybridus HOM05D005364 ORTHO05D006554 3.2e-59 232.6 226 55.3
ECA232G1379 Erigeron canadensis HOM05D005364 ORTHO05D006554 4.2e-59 232.3 224 50.9
AUR62013475 Chenopodium quinoa HOM05D005364 ORTHO05D006554 9.3e-59 231.1 226 52.7
PGR142G4297 Punica granatum HOM05D005364 ORTHO05D006554 9.3e-59 231.1 225 54.2
Os12g0188900 Oryza sativa ssp. japonica HOM05D005364 ORTHO05D006554 1.2e-58 230.7 205 59.5
AUR62026796 Chenopodium quinoa HOM05D005364 ORTHO05D006554 2.1e-58 229.9 226 50.9
Medtr1g029410 Medicago truncatula HOM05D005364 ORTHO05D006554 2.1e-58 229.9 227 52.9
FAN20G2210 Fragaria x ananassa HOM05D005364 ORTHO05D006554 3.5e-58 229.2 220 54.1
BcaB07g29980 Brassica carinata HOM05D005364 ORTHO05D006554 4.6e-58 228.8 224 53.6
Lalb_Chr06g0173651 Lupinus albus HOM05D005364 ORTHO05D006554 6.0e-58 228.4 224 53.6
A02p39590 Brassica napus HOM05D005364 ORTHO05D006554 7.9e-58 228.0 219 54.8
TPR.G33326 Trifolium pratense HOM05D005364 ORTHO05D006554 7.9e-58 228.0 230 53.9
BcaC03g17892 Brassica carinata HOM05D005364 ORTHO05D006554 1.8e-57 226.9 224 54.0
Ca_12657_v3 Cicer arietinum L. HOM05D005364 ORTHO05D003291 2.3e-57 226.5 230 51.7
C02p59350 Brassica napus HOM05D005364 ORTHO05D006554 3.0e-57 226.1 224 53.6
FAN27G1309 Fragaria x ananassa HOM05D005364 ORTHO05D006554 3.0e-57 226.1 220 53.2
Aa31LG11G4810 Aethionema arabicum HOM05D005364 ORTHO05D006554 3.9e-57 225.7 227 52.4
FvH4_2g15020 Fragaria vesca HOM05D005364 ORTHO05D006554 1.9e-56 223.4 220 53.2
Rhsim11G0077000 Rhododendron simsii HOM05D005364 ORTHO05D006554 2.5e-56 223.0 273 46.5
Sp2g21830 Schrenkiella parvula HOM05D005364 ORTHO05D006554 2.5e-56 223.0 227 53.3
THA.LOC104798861 Tarenaya hassleriana HOM05D005364 ORTHO05D006554 2.5e-56 223.0 237 51.5
BolC2t11997H Brassica oleracea HOM05D005364 ORTHO05D006554 3.3e-56 222.6 226 54.0
FAN15G1836 Fragaria x ananassa HOM05D005364 ORTHO05D006554 5.6e-56 221.9 220 52.7
Gohir.A02G068200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 1.6e-55 220.3 190 58.9
Thhalv10003904m.g Eutrema salsugineum HOM05D005364 ORTHO05D006554 4.8e-55 218.8 227 51.5
BraA02t08927Z Brassica rapa HOM05D005364 ORTHO05D006554 6.2e-55 218.4 222 53.6
BcaNung03925 Brassica carinata HOM05D005364 ORTHO05D006554 8.1e-55 218.0 227 50.7
FAN24G1520 Fragaria x ananassa HOM05D005364 ORTHO05D006554 1.4e-54 217.2 225 52.0
Nitab4.5_0007147g0010 Nicotiana tabacum HOM05D005364 ORTHO05D006554 1.4e-54 217.2 215 51.2
BraA06t26562Z Brassica rapa HOM05D005364 ORTHO05D006554 1.8e-54 216.9 226 51.3
BcaNung04840 Brassica carinata HOM05D005364 ORTHO05D006554 3.1e-54 216.1 227 51.1
AL6G37660 Arabidopsis lyrata HOM05D005364 ORTHO05D006554 4.0e-54 215.7 228 50.9
C07p42120 Brassica napus HOM05D005364 ORTHO05D006554 6.9e-54 214.9 227 50.2
A06p36390 Brassica napus HOM05D005364 ORTHO05D006554 2.6e-53 213.0 226 50.9
AT5G25800 Arabidopsis thaliana HOM05D005364 ORTHO05D006554 3.4e-53 212.6 226 50.0
BolC7t44743H Brassica oleracea HOM05D005364 ORTHO05D006554 3.4e-53 212.6 229 50.2
CARHR187620 Cardamine hirsuta HOM05D005364 ORTHO05D006554 4.5e-53 212.2 226 50.4
CDE08G0765 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 4.5e-53 212.2 180 61.1
Carub.0006s2357 Capsella rubella HOM05D005364 ORTHO05D006554 9.9e-53 211.1 225 50.7
Oeu001555.1 Olea europaea HOM05D005364 ORTHO05D006554 1.6e-50 203.8 193 55.4
Glyma.13G037300 Glycine max HOM05D005364 ORTHO05D006554 2.7e-50 203.0 194 52.6
DCAR_001119 Daucus carota HOM05D005364 ORTHO05D006554 1.7e-44 183.7 171 52.6
Hund26737 Selenicereus undatus HOM05D008449 ORTHO05D010615 2.9e-44 183.0 247 46.2
vmacro00886 Vaccinium macrocarpon HOM05D005364 ORTHO05D006554 3.2e-43 179.5 416 32.5
DCAR_010238 Daucus carota HOM05D005364 ORTHO05D006554 1.6e-42 177.2 253 39.5
Hund17384 Selenicereus undatus HOM05D005364 ORTHO05D006554 1.3e-41 174.1 171 54.4
Dinv41138 Davidia involucrata HOM05D005364 ORTHO05D006554 8.2e-39 164.9 225 42.7
Pp3c1_5030 Physcomitrium patens HOM05D005364 ORTHO05D006554 1.1e-38 164.5 260 36.9
AagrBONN_evm.TU.Sc2ySwM_344.2478 Anthoceros agrestis HOM05D005364 ORTHO05D006554 1.1e-32 144.4 255 36.1
Sc15g0007420 Simmondsia chinensis HOM05D005364 ORTHO05D006554 1.3e-31 141.0 137 55.5
Mapoly0062s0092 Marchantia polymorpha HOM05D005364 ORTHO05D006554 2.8e-31 139.8 286 35.0
CBR_g39514 Chara braunii HOM05D005364 ORTHO05D006554 1.9e-27 127.1 227 37.0
SEGI_12292 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 4.7e-26 122.5 121 47.1
EL10Ac1g01440 Beta vulgaris HOM05D005364 ORTHO05D006554 3.3e-24 116.3 88 63.6
Pp3c7_16700 Physcomitrium patens HOM05D005364 ORTHO05D006554 1.7e-23 114.0 185 36.8
HanXRQChr16g0503811 Helianthus annuus HOM05D005364 ORTHO05D006554 3.7e-23 112.8 92 56.5
HPP92_019392 Vanilla planifolia HOM05D005364 ORTHO05D006554 1.7e-12 77.4 39 100.0
SEGI_36407 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 3.2e-11 73.2 85 44.7
Mapoly0062s0093 Marchantia polymorpha HOM05D005364 ORTHO05D006554 8.8e-09 65.1 92 40.2
arahy.Tifrunner.gnm1.ann1.M37XHZ Arachis hypogaea HOM05D005364 ORTHO05D006554 2.6e-08 63.5 39 76.9
PRCOL_00002441 Prasinoderma coloniale HOM05D005364 ORTHO05D006554 7.5e-08 62.0 266 23.7


User provided reference genes

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