Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019277 Vanilla planifolia HOM05D000285 ORTHO05D005099 1.9e-98 362.5 175 100.0
Duzib187G1459 Durio zibethinus HOM05D000285 ORTHO05D005099 6.2e-17 91.7 272 31.2
Duzib264G0729 Durio zibethinus HOM05D000285 ORTHO05D005099 1.1e-16 90.9 256 32.0
PSO541G5519 Papaver somniferum HOM05D000285 ORTHO05D005099 4.0e-16 89.0 280 29.3
PSO675G1732 Papaver somniferum HOM05D000285 ORTHO05D005099 8.9e-16 87.8 280 28.9
CDE08G1600 Ceratophyllum demersum HOM05D000285 ORTHO05D005099 1.2e-15 87.4 273 30.0
CSS0045855 Camellia sinensis var. sinensis HOM05D000285 ORTHO05D005099 1.5e-15 87.0 276 29.0
Gohir.A11G192700 Gossypium hirsutum HOM05D000285 ORTHO05D005099 1.5e-15 87.0 272 29.8
QL06p041296 Quercus lobata HOM05D000285 ORTHO05D005099 2.0e-15 86.7 281 29.5
TAR625G0268 Trochodendron aralioides HOM05D000285 ORTHO05D005099 2.0e-15 86.7 274 29.6
ATR0104G012 Amborella trichopoda HOM05D000285 ORTHO05D005099 2.6e-15 86.3 274 30.3
arahy.Tifrunner.gnm1.ann1.I4NG9B Arachis hypogaea HOM05D000285 ORTHO05D005099 2.6e-15 86.3 259 30.5
Eucgr.H01665 Eucalyptus grandis HOM05D000285 ORTHO05D005099 2.6e-15 86.3 272 30.1
TWI09G1528 Tripterygium wilfordii HOM05D000285 ORTHO05D005099 2.6e-15 86.3 275 29.5
MSTRG.23743 Avicennia marina HOM05D000285 ORTHO05D005099 3.4e-15 85.9 282 30.5
Gohir.D12G069700 Gossypium hirsutum HOM05D000285 ORTHO05D005099 3.4e-15 85.9 272 29.4
Gorai.008G076700 Gossypium raimondii HOM05D000285 ORTHO05D005099 3.4e-15 85.9 272 29.8
Zm00001eb141420 Zea mays HOM05D000285 ORTHO05D005099 3.4e-15 85.9 276 30.4
Actinidia36489 Actinidia chinensis HOM05D000285 ORTHO05D005099 4.4e-15 85.5 269 29.4
CDE06G2167 Ceratophyllum demersum HOM05D000285 ORTHO05D005099 4.4e-15 85.5 273 30.4
Cc07_g06030 Coffea canephora HOM05D000285 ORTHO05D005099 4.4e-15 85.5 265 29.4
Glyma.01G186400 Glycine max HOM05D000285 ORTHO05D005099 4.4e-15 85.5 274 28.8
Gohir.A12G071600 Gossypium hirsutum HOM05D000285 ORTHO05D005099 4.4e-15 85.5 272 29.8
Dinv29988 Davidia involucrata HOM05D000285 ORTHO05D005099 5.8e-15 85.1 269 29.7
Thecc.01G056700 Theobroma cacao HOM05D000285 ORTHO05D005099 5.8e-15 85.1 272 29.4
Glyma.11G055500 Glycine max HOM05D000285 ORTHO05D005099 7.6e-15 84.7 276 29.0
Gohir.D11G199400 Gossypium hirsutum HOM05D000285 ORTHO05D005099 7.6e-15 84.7 272 29.4
Gorai.007G213600 Gossypium raimondii HOM05D000285 ORTHO05D005099 7.6e-15 84.7 272 29.4
PGR102G1302 Punica granatum HOM05D000285 ORTHO05D005099 7.6e-15 84.7 273 30.8
Potri.005G138600 Populus trichocarpa HOM05D000285 ORTHO05D005099 9.9e-15 84.3 272 27.6
Sopen02g035560 Solanum pennellii HOM05D000285 ORTHO05D005099 9.9e-15 84.3 276 30.4
MELO3C020894.2 Cucumis melo HOM05D000285 ORTHO05D005099 1.7e-14 83.6 278 29.9
CSS0036925 Camellia sinensis var. sinensis HOM05D000285 ORTHO05D005099 2.2e-14 83.2 270 29.3
Cpa.g.sc55.144 Carica papaya HOM05D000285 ORTHO05D005099 2.2e-14 83.2 271 29.5
CsaV3_2G016830 Cucumis sativus L. HOM05D000285 ORTHO05D005099 2.2e-14 83.2 280 29.6
HanXRQChr12g0378861 Helianthus annuus HOM05D000285 ORTHO05D005099 2.2e-14 83.2 275 29.5
Phvul.002G018500 Phaseolus vulgaris HOM05D000285 ORTHO05D005099 2.2e-14 83.2 272 29.0
Potri.007G044400 Populus trichocarpa HOM05D000285 ORTHO05D005099 2.2e-14 83.2 272 29.0
VMungo1215G3228 Vigna mungo HOM05D000285 ORTHO05D005099 2.2e-14 83.2 271 29.2
Actinidia16480 Actinidia chinensis HOM05D000285 ORTHO05D005099 2.9e-14 82.8 270 30.0
GSVIVG01022126001 Vitis vinifera HOM05D000285 ORTHO05D005099 2.9e-14 82.8 273 28.6
CiPaw.01G017700 Carya illinoinensis HOM05D000285 ORTHO05D005099 3.7e-14 82.4 272 28.3
ClCG02G012740 Citrullus lanatus HOM05D000285 ORTHO05D005099 3.7e-14 82.4 274 30.3
Manes.13G123900 Manihot esculenta HOM05D000285 ORTHO05D005099 3.7e-14 82.4 272 28.3
PGSC0003DMG401004019 Solanum tuberosum HOM05D000285 ORTHO05D005099 4.9e-14 82.0 277 29.6
ECA246G0492 Erigeron canadensis HOM05D000285 ORTHO05D005099 8.4e-14 81.3 270 28.5
Migut.H00429 Erythranthe guttata HOM05D000285 ORTHO05D005099 8.4e-14 81.3 287 28.6
Nitab4.5_0003298g0020 Nicotiana tabacum HOM05D000285 ORTHO05D005099 8.4e-14 81.3 273 29.3
Os01g0945800 Oryza sativa ssp. japonica HOM05D000285 ORTHO05D005099 8.4e-14 81.3 279 29.0
SGA_v2.0_scaffold15G07312 Striga asiatica HOM05D000899 ORTHO05D005099 8.4e-14 81.3 286 29.4
MD15G1284600 Malus domestica HOM05D000285 ORTHO05D005099 1.1e-13 80.9 274 28.5
Lsat_1_v5_gn_3_90660 Lactuca sativa HOM05D002562 ORTHO05D005099 1.4e-13 80.5 259 29.3
Psat2g167480 Pisum sativum HOM05D000285 ORTHO05D005099 1.4e-13 80.5 269 27.9
Solyc02g090910.3 Solanum lycopersicum HOM05D000285 ORTHO05D005099 1.4e-13 80.5 282 29.4
arahy.Tifrunner.gnm1.ann1.KQW02R Arachis hypogaea HOM05D000285 ORTHO05D005099 1.9e-13 80.1 279 28.7
Dinv39842 Davidia involucrata HOM05D000285 ORTHO05D005099 1.9e-13 80.1 269 28.6
Lj7A70T82 Lonicera japonica HOM05D000285 ORTHO05D005099 1.9e-13 80.1 279 29.0
MD02G1172600 Malus domestica HOM05D000285 ORTHO05D005099 1.9e-13 80.1 274 28.5
Prupe.7G132900 Prunus persica HOM05D000285 ORTHO05D005099 1.9e-13 80.1 275 27.6
Hma1.2p1_0017F.1_g011430 Hydrangea macrophylla HOM05D000285 ORTHO05D005099 2.4e-13 79.7 270 27.8
Nitab4.5_0008512g0020 Nicotiana tabacum HOM05D000285 ORTHO05D005099 2.4e-13 79.7 271 29.2
arahy.Tifrunner.gnm1.ann1.E12FQJ Arachis hypogaea HOM05D000285 ORTHO05D005099 3.2e-13 79.3 282 28.4
Peaxi162Scf00450g00320 Petunia axillaris HOM05D000285 ORTHO05D005099 3.2e-13 79.3 292 29.5
Manes.12G099600 Manihot esculenta HOM05D000285 ORTHO05D005099 4.1e-13 79.0 271 28.0
Sed0017310 Sechium edule HOM05D000285 ORTHO05D005099 4.1e-13 79.0 280 27.9
Ca_24766_v3 Cicer arietinum L. HOM05D000899 ORTHO05D005099 5.4e-13 78.6 269 27.5
TPR.G30698 Trifolium pratense HOM05D000285 ORTHO05D005099 5.4e-13 78.6 273 27.8
Aqoxy6G01305 Aquilegia oxysepala HOM05D000285 ORTHO05D005099 7.1e-13 78.2 281 28.8
Medtr5g017280 Medicago truncatula HOM05D000285 ORTHO05D005099 7.1e-13 78.2 270 27.8
AL7G13730 Arabidopsis lyrata HOM05D000285 ORTHO05D005099 9.2e-13 77.8 290 26.9
FvH4_1g16100 Fragaria vesca HOM05D000285 ORTHO05D005099 9.2e-13 77.8 280 28.2
CANSAT01G2142 Cannabis sativa HOM05D000285 ORTHO05D005099 1.2e-12 77.4 274 28.1
Hund13549 Selenicereus undatus HOM05D000285 ORTHO05D005099 1.2e-12 77.4 274 28.8
Aa31LG6G14010 Aethionema arabicum HOM05D000285 ORTHO05D005099 1.6e-12 77.0 287 26.5
FAN28G2221 Fragaria x ananassa HOM05D000285 ORTHO05D005099 2.1e-12 76.6 286 28.3
AUR62001924 Chenopodium quinoa HOM05D000285 ORTHO05D005099 2.7e-12 76.3 288 28.8
Haze_15393 Corylus avellana HOM05D000285 ORTHO05D005099 2.7e-12 76.3 285 28.1
RcHm_v2.0_Chr2g0105721 Rosa chinensis HOM05D000285 ORTHO05D005099 2.7e-12 76.3 276 26.1
THA.LOC104807586 Tarenaya hassleriana HOM05D000285 ORTHO05D005099 2.7e-12 76.3 280 27.1
unitig_736.g22666 Utricularia gibba HOM05D000285 ORTHO05D005099 2.7e-12 76.3 276 28.3
CDE04G1611 Ceratophyllum demersum HOM05D000285 ORTHO05D005099 3.5e-12 75.9 268 29.5
AUR62003886 Chenopodium quinoa HOM05D000285 ORTHO05D005099 3.5e-12 75.9 288 28.5
FAN26G0644 Fragaria x ananassa HOM05D000285 ORTHO05D005099 4.6e-12 75.5 286 28.3
Lj2g0002373 Lotus japonicus HOM05D000285 ORTHO05D005099 6.0e-12 75.1 269 27.1
Hund16317 Selenicereus undatus HOM05D000285 ORTHO05D005099 6.0e-12 75.1 267 29.2
Ciclev10025943m.g Citrus clementina HOM05D000285 ORTHO05D005099 7.8e-12 74.7 272 27.6
FAN23G1456 Fragaria x ananassa HOM05D000285 ORTHO05D005099 7.8e-12 74.7 286 28.0
Atru.chr3.322 Acer truncatum HOM05D000285 ORTHO05D005099 1.0e-11 74.3 290 26.9
BcaNung05425 Brassica carinata HOM05D000285 ORTHO05D005099 1.0e-11 74.3 287 26.5
Sp7g34800 Schrenkiella parvula HOM05D000285 ORTHO05D005099 1.0e-11 74.3 287 27.2
Lj4C150T3 Lonicera japonica HOM05D000285 ORTHO05D005099 1.3e-11 73.9 269 28.3
Carub.0007s0315 Capsella rubella HOM05D000285 ORTHO05D005099 2.3e-11 73.2 290 26.9
FAN19G1087 Fragaria x ananassa HOM05D000285 ORTHO05D005099 3.0e-11 72.8 297 27.3
Thhalv10025462m.g Eutrema salsugineum HOM05D000285 ORTHO05D005099 3.9e-11 72.4 289 27.3
Nn1g04835 Nelumbo nucifera HOM05D000285 ORTHO05D005099 3.9e-11 72.4 271 27.7
Zm00001eb363160 Zea mays HOM05D000285 ORTHO05D005099 3.9e-11 72.4 188 33.5
AT4G36960 Arabidopsis thaliana HOM05D000285 ORTHO05D005099 1.1e-10 70.9 290 27.6
Oeu014840.1 Olea europaea HOM05D000285 ORTHO05D005099 1.5e-10 70.5 278 26.6
C07p62210 Brassica napus HOM05D000285 ORTHO05D005099 1.9e-10 70.1 289 26.3
CARHR245540 Cardamine hirsuta HOM05D000285 ORTHO05D005099 1.9e-10 70.1 290 26.2
Sc03g0001610 Simmondsia chinensis HOM05D000285 ORTHO05D005099 1.9e-10 70.1 266 27.1
Ca_22160_v3 Cicer arietinum L. HOM05D000285 ORTHO05D005099 2.5e-10 69.7 274 26.6
BcaNung02522 Brassica carinata HOM05D000285 ORTHO05D005099 3.3e-10 69.3 274 26.3
Lj4g0013369 Lotus japonicus HOM05D000285 ORTHO05D005099 3.3e-10 69.3 278 25.5
Oeu031958.1 Olea europaea HOM05D000285 ORTHO05D005099 3.3e-10 69.3 185 33.0
MBI03_g20876_MAGBIO Magnolia biondii HOM05D000285 ORTHO05D005099 4.3e-10 68.9 278 27.3
EL10Ac6g15740 Beta vulgaris HOM05D000285 ORTHO05D005099 7.3e-10 68.2 49 67.3
Actinidia12050 Actinidia chinensis HOM05D000285 ORTHO05D005099 1.6e-09 67.0 49 65.3
vmacro05342 Vaccinium macrocarpon HOM05D000285 ORTHO05D005099 1.6e-09 67.0 49 65.3
COL.COLO4_11423 Corchorus olitorius HOM05D000285 ORTHO05D005099 2.8e-09 66.2 187 31.0
MBI03_g13480_MAGBIO Magnolia biondii HOM05D000285 ORTHO05D005099 3.6e-09 65.9 49 65.3
Rhsim08G0100200 Rhododendron simsii HOM05D000285 ORTHO05D005099 6.2e-09 65.1 49 63.3
HanXRQChr05g0129971 Helianthus annuus HOM05D000285 ORTHO05D005099 1.4e-08 63.9 130 37.7
DCAR_025736 Daucus carota HOM05D000285 ORTHO05D005099 1.8e-08 63.5 193 29.5
A03p64850 Brassica napus HOM05D000285 ORTHO05D005099 2.4e-08 63.2 49 61.2
BolC7t46637H Brassica oleracea HOM05D000285 ORTHO05D005099 2.4e-08 63.2 49 61.2
BraA03t15548Z Brassica rapa HOM05D000285 ORTHO05D005099 2.4e-08 63.2 49 61.2
Lalb_Chr00c02g0404081 Lupinus albus HOM05D000285 ORTHO05D005099 2.4e-08 63.2 49 61.2
C01p01970 Brassica napus HOM05D000285 ORTHO05D005099 3.1e-08 62.8 52 57.7
BolC1t00191H Brassica oleracea HOM05D000285 ORTHO05D005099 3.1e-08 62.8 52 57.7
Sabra07G0039300 Salix brachista HOM05D000285 ORTHO05D005099 4.0e-08 62.4 49 61.2
SMO367G0068 Selaginella moellendorffii HOM05D000285 ORTHO05D005099 6.8e-08 61.6 298 25.2
vmacro17956 Vaccinium macrocarpon HOM05D000285 ORTHO05D005099 6.8e-08 61.6 49 59.2
Sc07g0000770 Simmondsia chinensis HOM05D000285 ORTHO05D005099 8.9e-08 61.2 258 27.1
AagrBONN_evm.TU.Sc2ySwM_228.102 Anthoceros agrestis HOM05D000285 ORTHO05D005099 1.2e-07 60.8 313 24.6
Lalb_Chr05g0226571 Lupinus albus HOM05D000285 ORTHO05D005099 1.5e-07 60.5 49 59.2
Psat4g086680 Pisum sativum HOM05D000285 ORTHO05D005099 2.6e-07 59.7 272 25.7
arahy.Tifrunner.gnm1.ann1.H8SGQ8 Arachis hypogaea HOM05D000285 ORTHO05D005099 3.4e-07 59.3 49 59.2
Eucgr.I00920 Eucalyptus grandis HOM05D000285 ORTHO05D005099 4.4e-07 58.9 49 57.1
Nn5g27350 Nelumbo nucifera HOM05D000285 ORTHO05D005099 4.4e-07 58.9 171 29.2
Mapoly0059s0021 Marchantia polymorpha HOM05D000285 ORTHO05D005099 9.9e-07 57.8 49 57.1
TWI73G0782 Tripterygium wilfordii HOM05D000285 ORTHO05D005099 9.9e-07 57.8 49 57.1
SEGI_18865 Sequoiadendron giganteum HOM05D000285 ORTHO05D005099 2.9e-06 56.2 49 57.1
CBR_g41687 Chara braunii HOM05D000285 ORTHO05D005099 8.4e-06 54.7 177 28.2


User provided reference genes

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