Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019198 Vanilla planifolia HOM05D002160 ORTHO05D002012 3.0e-36 154.8 89 100.0
HPP92_019189 Vanilla planifolia HOM05D002160 ORTHO05D002012 9.7e-35 149.8 89 96.6
HPP92_028586 Vanilla planifolia HOM05D002160 ORTHO05D002012 6.8e-12 73.9 62 75.8
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 7.0e-09 63.9 71 57.7
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.6e-08 62.8 71 57.7
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 2.0e-08 62.4 71 57.7
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 2.0e-08 62.4 71 57.7
Duzib128G1340 Durio zibethinus HOM05D002160 ORTHO05D002012 2.7e-08 62.0 71 56.3
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 4.5e-08 61.2 71 56.3
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 4.5e-08 61.2 71 56.3
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 5.9e-08 60.8 71 56.3
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 1.0e-07 60.1 73 54.8
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.7e-07 59.3 71 54.9
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 2.9e-07 58.5 63 65.1
Gorai.002G257700 Gossypium raimondii HOM05D002160 ORTHO05D002012 2.9e-07 58.5 71 54.9
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 3.9e-07 58.2 72 56.9
CiPaw.03G262000 Carya illinoinensis HOM05D002160 ORTHO05D002012 5.0e-07 57.8 63 44.4
Manes.08G079262 Manihot esculenta HOM05D002160 ORTHO05D002012 5.0e-07 57.8 63 61.9
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 5.0e-07 57.8 62 64.5
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 5.0e-07 57.8 71 56.3
arahy.Tifrunner.gnm1.ann1.FFQQ4A Arachis hypogaea HOM05D002160 ORTHO05D002012 6.6e-07 57.4 63 63.5
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 1.1e-06 56.6 62 58.1
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 1.5e-06 56.2 71 53.5
arahy.Tifrunner.gnm1.ann1.02J1VT Arachis hypogaea HOM05D002160 ORTHO05D002012 1.9e-06 55.8 74 58.1
arahy.Tifrunner.gnm1.ann1.8X9BUY Arachis hypogaea HOM05D002160 ORTHO05D002012 1.9e-06 55.8 74 58.1
Cfa017382 Carpinus fangiana HOM05D002160 ORTHO05D002012 1.9e-06 55.8 61 60.7
Gohir.A01G222400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.9e-06 55.8 71 53.5
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 1.9e-06 55.8 62 59.7
Haze_20789 Corylus avellana HOM05D002160 ORTHO05D002012 2.5e-06 55.5 71 53.5
MBI14_g20106_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 2.5e-06 55.5 63 61.9
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 3.3e-06 55.1 71 53.5
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 3.3e-06 55.1 62 56.5
COL.COLO4_14799 Corchorus olitorius HOM05D002160 ORTHO05D002012 7.3e-06 53.9 71 52.1
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 9.5e-06 53.5 62 58.1
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 9.5e-06 53.5 61 60.7


User provided reference genes

Program Settings