Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 6.1e-39 163.7 83 100.0
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 2.4e-11 72.0 42 73.8
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 7.0e-11 70.5 66 54.5
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 7.0e-11 70.5 61 59.0
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 7.0e-11 70.5 44 70.5
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 9.1e-11 70.1 39 79.5
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 9.1e-11 70.1 39 79.5
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 9.1e-11 70.1 39 79.5
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 9.1e-11 70.1 39 79.5
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 1.2e-10 69.7 40 75.0
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 1.2e-10 69.7 39 76.9
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 2.0e-10 68.9 42 71.4
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 2.0e-10 68.9 39 74.4
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 2.0e-10 68.9 39 74.4
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 2.7e-10 68.6 38 78.9
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 2.7e-10 68.6 43 69.8
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 4.5e-10 67.8 39 74.4
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 5.9e-10 67.4 40 72.5
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 5.9e-10 67.4 45 64.4
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 7.7e-10 67.0 40 72.5
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 7.7e-10 67.0 40 72.5
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 7.7e-10 67.0 45 64.4
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 7.7e-10 67.0 57 57.9
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 7.7e-10 67.0 39 76.9
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 7.7e-10 67.0 39 76.9
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 1.0e-09 66.6 39 74.4
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 1.0e-09 66.6 40 72.5
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 1.3e-09 66.2 39 71.8
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 1.3e-09 66.2 43 67.4
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 1.7e-09 65.9 40 72.5
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 1.7e-09 65.9 38 73.7
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 1.7e-09 65.9 50 62.0
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 1.7e-09 65.9 40 72.5
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.7e-09 65.9 38 76.3
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.7e-09 65.9 38 76.3
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 1.7e-09 65.9 38 76.3
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 1.7e-09 65.9 45 64.4
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 2.2e-09 65.5 39 74.4
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 2.9e-09 65.1 39 71.8
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 3.8e-09 64.7 40 70.0
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 3.8e-09 64.7 39 71.8
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 3.8e-09 64.7 39 71.8
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 3.8e-09 64.7 39 71.8
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 3.8e-09 64.7 39 71.8
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 3.8e-09 64.7 58 56.9
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 3.8e-09 64.7 39 71.8
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 3.8e-09 64.7 39 71.8
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 3.8e-09 64.7 39 74.4
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 3.8e-09 64.7 39 71.8
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 5.0e-09 64.3 40 70.0
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 5.0e-09 64.3 41 73.2
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 6.5e-09 63.9 48 68.8
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 6.5e-09 63.9 45 66.7
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 6.5e-09 63.9 45 66.7
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 6.5e-09 63.9 40 70.0
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 8.5e-09 63.5 40 70.0
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 1.1e-08 63.2 40 67.5
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 1.1e-08 63.2 39 66.7
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 1.1e-08 63.2 39 66.7
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 1.1e-08 63.2 37 73.0
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 1.5e-08 62.8 43 65.1
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 1.5e-08 62.8 44 63.6
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 1.5e-08 62.8 38 71.1
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 1.5e-08 62.8 39 71.8
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 1.9e-08 62.4 39 69.2
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 1.9e-08 62.4 56 53.6
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 5.5e-08 60.8 39 71.8
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 7.2e-08 60.5 39 64.1
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 7.2e-08 60.5 38 73.7
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 7.2e-08 60.5 43 62.8
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 9.4e-08 60.1 36 75.0
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 9.4e-08 60.1 39 69.2
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 9.4e-08 60.1 62 51.6
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 1.2e-07 59.7 39 64.1
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 1.2e-07 59.7 39 64.1
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 1.2e-07 59.7 39 66.7
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.6e-07 59.3 40 65.0
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.6e-07 59.3 40 65.0
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.6e-07 59.3 40 65.0
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.6e-07 59.3 40 65.0
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 1.6e-07 59.3 43 62.8
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 1.6e-07 59.3 43 62.8
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 1.6e-07 59.3 39 69.2
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 2.1e-07 58.9 39 64.1
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 2.1e-07 58.9 38 71.1
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 2.7e-07 58.5 43 62.8
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 4.7e-07 57.8 39 64.1
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 4.7e-07 57.8 41 63.4
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 4.7e-07 57.8 38 68.4
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 8.0e-07 57.0 40 57.5
SEGI_07868 Sequoiadendron giganteum HOM05D007662 ORTHO05D009666 8.0e-07 57.0 37 62.2
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 1.0e-06 56.6 39 64.1
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 1.0e-06 56.6 35 71.4
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 1.4e-06 56.2 38 60.5
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 3.0e-06 55.1 39 61.5


User provided reference genes

Program Settings