Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 5.2e-184 647.5 314 100.0
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.5e-93 346.3 319 56.7
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 5.6e-93 345.1 321 56.7
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 3.6e-92 342.4 288 60.4
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 4.7e-92 342.0 269 61.7
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 1.2e-90 337.4 264 62.5
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 6.0e-87 325.1 249 62.7
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 1.0e-86 324.3 234 64.5
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 1.0e-86 324.3 281 59.1
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.3e-86 323.9 244 63.1
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 1.7e-86 323.6 274 58.8
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 2.3e-86 323.2 211 71.1
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 2.3e-86 323.2 228 64.9
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 3.9e-86 322.4 211 69.2
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 6.6e-86 321.6 220 66.4
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.5e-85 320.5 216 68.5
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 1.9e-85 320.1 281 57.3
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.9e-85 320.1 216 68.1
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.5e-85 319.7 208 69.2
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 2.5e-85 319.7 286 55.9
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 3.3e-85 319.3 208 68.8
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 3.3e-85 319.3 208 68.8
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 4.3e-85 318.9 211 70.1
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 4.3e-85 318.9 218 66.5
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 5.6e-85 318.5 211 68.2
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 7.3e-85 318.2 211 67.3
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 9.5e-85 317.8 297 53.9
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 1.6e-84 317.0 211 66.4
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 2.1e-84 316.6 245 59.6
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 2.8e-84 316.2 244 61.9
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 3.6e-84 315.8 237 62.9
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 3.6e-84 315.8 206 69.9
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 3.6e-84 315.8 216 68.1
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 3.6e-84 315.8 210 69.5
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 3.6e-84 315.8 317 53.6
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 8.1e-84 314.7 216 68.1
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.1e-83 314.3 211 67.3
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 1.4e-83 313.9 204 69.1
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 2.3e-83 313.2 216 68.1
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 2.3e-83 313.2 289 55.7
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 4.0e-83 312.4 223 65.9
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 5.2e-83 312.0 210 66.7
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 8.9e-83 311.2 285 54.4
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 8.9e-83 311.2 216 67.6
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 8.9e-83 311.2 198 68.7
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 1.2e-82 310.8 203 70.4
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.2e-82 310.8 209 68.9
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 1.5e-82 310.5 212 67.9
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 1.5e-82 310.5 212 67.9
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 1.5e-82 310.5 210 66.2
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 2.0e-82 310.1 214 65.4
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 2.0e-82 310.1 256 57.4
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 2.0e-82 310.1 206 68.9
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 2.0e-82 310.1 210 67.1
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 2.6e-82 309.7 209 67.9
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 3.4e-82 309.3 211 64.9
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 3.4e-82 309.3 216 66.2
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.4e-82 308.9 212 66.5
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.4e-82 308.9 209 67.0
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 4.4e-82 308.9 315 51.4
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 7.5e-82 308.1 204 67.2
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 1.3e-81 307.4 231 62.8
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 1.3e-81 307.4 211 66.4
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 1.7e-81 307.0 198 68.2
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 1.7e-81 307.0 226 62.8
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.7e-81 307.0 220 64.1
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 1.7e-81 307.0 211 65.9
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 1.7e-81 307.0 199 69.3
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 2.2e-81 306.6 212 67.5
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 2.2e-81 306.6 220 64.1
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.2e-81 306.6 220 64.1
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 2.2e-81 306.6 198 69.7
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 2.2e-81 306.6 209 67.5
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 2.9e-81 306.2 198 67.7
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 2.9e-81 306.2 198 67.7
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 2.9e-81 306.2 217 62.7
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 2.9e-81 306.2 217 62.7
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 4.9e-81 305.4 211 64.9
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 4.9e-81 305.4 220 64.1
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 4.9e-81 305.4 201 67.2
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 8.3e-81 304.7 203 67.5
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 1.1e-80 304.3 217 62.2
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 1.4e-80 303.9 201 70.1
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.9e-80 303.5 226 64.6
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 1.9e-80 303.5 198 66.7
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 1.9e-80 303.5 292 55.1
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 2.4e-80 303.1 210 65.7
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 2.4e-80 303.1 259 56.8
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 3.2e-80 302.8 199 69.3
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 4.1e-80 302.4 200 68.0
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 5.4e-80 302.0 216 63.0
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 5.4e-80 302.0 216 63.0
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 5.4e-80 302.0 198 66.2
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 9.2e-80 301.2 206 66.5
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 2.1e-79 300.1 199 70.4
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 2.7e-79 299.7 214 63.6
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 3.5e-79 299.3 221 63.3
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 6.0e-79 298.5 309 49.5
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 6.0e-79 298.5 198 69.2
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 7.8e-79 298.1 188 72.3
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 7.8e-79 298.1 199 67.8
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 1.7e-78 297.0 199 66.3
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 1.7e-78 297.0 199 66.3
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.7e-78 297.0 199 66.3
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.3e-78 296.6 202 65.8
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 3.0e-78 296.2 188 71.3
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 5.1e-78 295.4 241 58.1
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.1e-77 294.3 198 66.7
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 3.3e-77 292.7 200 66.5
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 4.3e-77 292.4 259 55.6
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 9.5e-77 291.2 198 66.2
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 9.5e-77 291.2 188 70.7
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.1e-76 290.0 259 54.8
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 3.6e-76 289.3 235 58.3
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 5.4e-72 275.4 272 52.9
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 7.1e-72 275.0 205 60.0
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 7.1e-72 275.0 253 53.0
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 7.8e-71 271.6 198 60.6
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 1.1e-69 267.7 214 58.4
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 6.2e-68 261.9 200 61.0
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 3.5e-63 246.1 156 69.2
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 4.3e-61 239.2 158 68.4
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 1.1e-59 234.6 265 49.1
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 1.8e-59 233.8 208 52.4
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 2.6e-58 229.9 156 66.0
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 6.4e-57 225.3 145 69.0
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 1.1e-56 224.6 158 64.6
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 1.1e-56 224.6 146 70.5
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 4.3e-53 212.6 138 69.6
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 7.4e-45 185.3 117 70.1
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 1.2e-42 177.9 189 47.1
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 9.3e-40 168.3 146 57.5
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 4.3e-37 159.5 153 49.7
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 7.2e-32 142.1 116 55.2
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 6.5e-25 119.0 83 63.9
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 2.6e-13 80.5 57 59.6
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.2e-12 77.4 51 64.7
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 1.8e-11 74.3 81 46.9
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.6e-10 71.2 59 52.5
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 4.5e-10 69.7 82 43.9
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 5.0e-09 66.2 94 40.4
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 8.5e-09 65.5 44 63.6
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 1.9e-08 64.3 57 54.4
SEGI_31523 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.4e-06 58.2 57 50.9


User provided reference genes

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