Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019024 Vanilla planifolia HOM05D004453 ORTHO05D005375 8.5e-73 276.9 143 100.0
MBI19_g09317_MAGBIO Magnolia biondii HOM05D004453 ORTHO05D005375 6.2e-15 84.7 117 45.3
Zm00001eb303530 Zea mays HOM05D004453 ORTHO05D005375 2.0e-13 79.7 118 39.0
Os07g0223700 Oryza sativa ssp. japonica HOM05D004453 ORTHO05D005375 1.3e-12 77.0 127 36.2
Actinidia16228 Actinidia chinensis HOM05D004453 ORTHO05D005375 1.7e-12 76.6 124 41.1
PGR119G0742 Punica granatum HOM05D004453 ORTHO05D005375 6.4e-12 74.7 126 38.1
Nn7g35809 Nelumbo nucifera HOM05D004453 ORTHO05D005375 1.1e-11 73.9 131 42.7
Zm00001eb095200 Zea mays HOM05D004453 ORTHO05D005375 1.1e-11 73.9 105 40.0
Nn2g15897 Nelumbo nucifera HOM05D004453 ORTHO05D005375 2.4e-11 72.8 130 43.1
SEGI_24089 Sequoiadendron giganteum HOM05D004453 ORTHO05D005375 3.2e-11 72.4 97 44.3
TAR623G1190 Trochodendron aralioides HOM05D004453 ORTHO05D005375 3.2e-11 72.4 139 41.7
ATR0068G064 Amborella trichopoda HOM05D004453 ORTHO05D005375 6.0e-10 68.2 117 40.2
Manes.17G052200 Manihot esculenta HOM05D004453 ORTHO05D005375 7.8e-10 67.8 119 41.2
CDE02G3000 Ceratophyllum demersum HOM05D004453 ORTHO05D005375 1.7e-09 66.6 118 37.3
Solyc01g050070.4 Solanum lycopersicum HOM05D004453 ORTHO05D005375 5.1e-09 65.1 108 42.6
Sopen01g019490 Solanum pennellii HOM05D004453 ORTHO05D005375 5.1e-09 65.1 108 42.6
Nitab4.5_0000075g0210 Nicotiana tabacum HOM05D004453 ORTHO05D005375 6.6e-09 64.7 118 39.0
Cfa009532 Carpinus fangiana HOM05D004453 ORTHO05D005375 8.6e-09 64.3 128 40.6
Haze_22921 Corylus avellana HOM05D004453 ORTHO05D005375 8.6e-09 64.3 128 40.6
Aqoxy1G00087 Aquilegia oxysepala HOM05D004453 ORTHO05D005375 1.1e-08 63.9 130 35.4
CDE04G0921 Ceratophyllum demersum HOM05D004453 ORTHO05D005375 1.1e-08 63.9 129 38.0
Dinv13490 Davidia involucrata HOM05D004453 ORTHO05D005375 2.5e-08 62.8 129 39.5
Rhsim01G0183700 Rhododendron simsii HOM05D004453 ORTHO05D005375 2.5e-08 62.8 124 40.3
Dinv03791 Davidia involucrata HOM05D004453 ORTHO05D005375 3.3e-08 62.4 122 38.5
Glyma.20G024900 Glycine max HOM05D004453 ORTHO05D005375 3.3e-08 62.4 100 42.0
Nitab4.5_0002355g0020 Nicotiana tabacum HOM05D004453 ORTHO05D005375 3.3e-08 62.4 82 46.3
TAR369G0719 Trochodendron aralioides HOM05D004453 ORTHO05D005375 5.6e-08 61.6 131 38.2
Glyma.07G225000 Glycine max HOM05D004453 ORTHO05D005375 7.3e-08 61.2 100 42.0
Lj4g0023466 Lotus japonicus HOM05D004453 ORTHO05D005375 7.3e-08 61.2 84 45.2
Sabra01G0001000 Salix brachista HOM05D004453 ORTHO05D005375 7.3e-08 61.2 81 48.1
A05p17380 Brassica napus HOM05D004453 ORTHO05D005375 9.5e-08 60.8 139 35.3
CARHR045220 Cardamine hirsuta HOM05D004453 ORTHO05D005375 9.5e-08 60.8 122 37.7
QL01p007909 Quercus lobata HOM05D004453 ORTHO05D005375 9.5e-08 60.8 88 43.2
BcaC08g44204 Brassica carinata HOM05D004453 ORTHO05D005375 1.6e-07 60.1 138 35.5
BolC6t36812H Brassica oleracea HOM05D004453 ORTHO05D005375 1.6e-07 60.1 138 35.5
DCAR_023824 Daucus carota HOM05D004453 ORTHO05D005375 1.6e-07 60.1 84 42.9
Thhalv10011735m.g Eutrema salsugineum HOM05D004453 ORTHO05D005375 1.6e-07 60.1 132 37.1
Lj1C553T2 Lonicera japonica HOM05D004453 ORTHO05D005375 1.6e-07 60.1 82 45.1
GSVIVG01025506001 Vitis vinifera HOM05D004453 ORTHO05D005375 2.1e-07 59.7 120 37.5
C06p16140 Brassica napus HOM05D004453 ORTHO05D005375 2.8e-07 59.3 136 35.3
CSS0040072 Camellia sinensis var. sinensis HOM05D004453 ORTHO05D005375 3.6e-07 58.9 84 44.0
Medtr4g083300 Medicago truncatula HOM05D004453 ORTHO05D005375 3.6e-07 58.9 111 37.8
Ah.04g153920 Amaranthus hybridus HOM05D004453 ORTHO05D005375 4.7e-07 58.5 93 41.9
CsaV3_4G017680 Cucumis sativus L. HOM05D004453 ORTHO05D005375 4.7e-07 58.5 99 41.4
Manes.16G034900 Manihot esculenta HOM05D004453 ORTHO05D005375 4.7e-07 58.5 126 37.3
Phvul.002G101400 Phaseolus vulgaris HOM05D004453 ORTHO05D005375 4.7e-07 58.5 109 40.4
Sed0012812 Sechium edule HOM05D004453 ORTHO05D005375 4.7e-07 58.5 99 40.4
Atru.chr4.902 Acer truncatum HOM05D004453 ORTHO05D005375 6.2e-07 58.2 128 35.2
AL1G63560 Arabidopsis lyrata HOM05D004453 ORTHO05D005375 6.2e-07 58.2 124 37.9
ClCG02G024480 Citrullus lanatus HOM05D004453 ORTHO05D005375 6.2e-07 58.2 80 45.0
MELO3C031044.2 Cucumis melo HOM05D004453 ORTHO05D005375 6.2e-07 58.2 105 40.0
TPR.G34071 Trifolium pratense HOM05D004453 ORTHO05D005375 6.2e-07 58.2 86 45.3
Lalb_Chr16g0385441 Lupinus albus HOM05D004453 ORTHO05D005375 8.1e-07 57.8 101 40.6
Peaxi162Scf00186g01212 Petunia axillaris HOM05D004453 ORTHO05D005375 8.1e-07 57.8 116 35.3
TWI34G0101 Tripterygium wilfordii HOM05D004453 ORTHO05D005375 8.1e-07 57.8 93 40.9
PSO541G5087 Papaver somniferum HOM05D004453 ORTHO05D005375 1.4e-06 57.0 79 44.3
Psat7g133480 Pisum sativum HOM05D004453 ORTHO05D005375 1.4e-06 57.0 96 42.7
vmacro12597 Vaccinium macrocarpon HOM05D004453 ORTHO05D005375 1.4e-06 57.0 90 38.9
BcaC01g01533 Brassica carinata HOM05D004453 ORTHO05D005375 1.8e-06 56.6 127 32.3
Cpa.g.sc119.21 Carica papaya HOM05D004453 ORTHO05D005375 1.8e-06 56.6 91 41.8
Potri.001G001400 Populus trichocarpa HOM05D004453 ORTHO05D005375 1.8e-06 56.6 81 44.4
QL01p007925 Quercus lobata HOM05D004453 ORTHO05D005375 1.8e-06 56.6 114 36.0
Hund01806 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.8e-06 56.6 93 41.9
Carub.0001s4404 Capsella rubella HOM05D004453 ORTHO05D005375 2.4e-06 56.2 132 35.6
Ca_18793_v3 Cicer arietinum L. HOM05D004453 ORTHO05D005375 2.4e-06 56.2 96 40.6
Aa31LG8G630 Aethionema arabicum HOM05D004453 ORTHO05D005375 4.0e-06 55.5 77 41.6
Lalb_Chr05g0219881 Lupinus albus HOM05D004453 ORTHO05D005375 4.0e-06 55.5 85 43.5
THA.LOC104815673 Tarenaya hassleriana HOM05D004453 ORTHO05D005375 4.0e-06 55.5 123 37.4
VMungo0251G3504 Vigna mungo HOM05D004453 ORTHO05D005375 4.0e-06 55.5 82 45.1
A08p00560 Brassica napus HOM05D004453 ORTHO05D005375 5.2e-06 55.1 128 35.9
C03p92850 Brassica napus HOM05D004453 ORTHO05D005375 5.2e-06 55.1 129 33.3
BolC3t21591H Brassica oleracea HOM05D004453 ORTHO05D005375 5.2e-06 55.1 129 33.3
Cc01_g00270 Coffea canephora HOM05D004453 ORTHO05D005375 5.2e-06 55.1 119 36.1
PSO675G3694 Papaver somniferum HOM05D004453 ORTHO05D005375 6.8e-06 54.7 79 41.8
arahy.Tifrunner.gnm1.ann1.GHD6QC Arachis hypogaea HOM05D004453 ORTHO05D005375 8.9e-06 54.3 122 34.4
ECA238G2653 Erigeron canadensis HOM05D004453 ORTHO05D005375 8.9e-06 54.3 114 36.8
Eucgr.B03584 Eucalyptus grandis HOM05D004453 ORTHO05D005375 8.9e-06 54.3 82 40.2


User provided reference genes

Program Settings