Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018997 Vanilla planifolia HOM05D006083 ORTHO05D007634 0.0e+00 1301.2 702 100.0
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 1.5e-29 135.6 828 24.4
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 2.8e-28 131.3 677 25.3
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 3.7e-28 131.0 672 27.7
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 3.7e-28 131.0 845 25.7
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 4.8e-28 130.6 682 26.5
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 6.3e-28 130.2 679 27.4
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 1.4e-24 119.0 458 27.3
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 1.9e-24 118.6 663 26.5
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 1.6e-23 115.5 807 23.8
TAR369G0795 Trochodendron aralioides HOM05D006083 ORTHO05D007634 4.7e-23 114.0 844 23.5
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 1.8e-22 112.1 700 24.9
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 3.0e-22 111.3 809 25.6
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 1.7e-20 105.5 617 26.9
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 2.2e-20 105.1 624 26.3
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 3.7e-20 104.4 459 28.8
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 4.8e-20 104.0 250 35.2
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 4.8e-20 104.0 598 28.1
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 4.8e-20 104.0 826 24.6
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 6.3e-20 103.6 474 26.4
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.8e-19 102.1 513 27.7
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.8e-19 102.1 514 28.4
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 1.8e-19 102.1 519 26.0
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 2.4e-19 101.7 511 27.0
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 2.4e-19 101.7 258 34.9
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 3.1e-19 101.3 675 25.2
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 9.1e-19 99.8 720 25.7
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 9.1e-19 99.8 645 26.5
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 2.0e-18 98.6 855 22.6
Phvul.008G013666 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 3.5e-18 97.8 458 28.8
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 4.5e-18 97.4 341 28.2
Hund24433 Selenicereus undatus HOM05D006083 ORTHO05D007634 4.5e-18 97.4 283 32.5
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 5.9e-18 97.1 566 27.2
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 1.3e-17 95.9 552 27.7
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.7e-17 95.5 587 26.6
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 1.7e-17 95.5 291 32.6
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.9e-17 94.7 587 26.4
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 2.9e-17 94.7 316 29.7
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 2.9e-17 94.7 288 33.0
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 3.8e-17 94.4 246 32.9
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 3.8e-17 94.4 341 27.9
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 5.0e-17 94.0 275 32.0
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 5.0e-17 94.0 610 26.4
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 8.5e-17 93.2 401 26.2
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 8.5e-17 93.2 569 27.1
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 1.1e-16 92.8 227 34.8
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 1.1e-16 92.8 273 31.9
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 1.5e-16 92.4 272 30.9
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 1.5e-16 92.4 686 25.7
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 3.2e-16 91.3 591 26.1
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 4.2e-16 90.9 749 24.7
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 4.2e-16 90.9 257 33.5
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 5.5e-16 90.5 686 25.7
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 5.5e-16 90.5 605 24.6
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 7.2e-16 90.1 637 26.1
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 7.2e-16 90.1 637 26.1
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 9.4e-16 89.7 329 29.8
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 9.4e-16 89.7 159 37.1
Cpa.g.sc1.375 Carica papaya HOM05D006083 ORTHO05D007634 1.2e-15 89.4 283 30.0
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 1.2e-15 89.4 175 39.4
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 1.2e-15 89.4 271 33.6
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 1.6e-15 89.0 385 27.8
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 2.1e-15 88.6 736 22.1
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 3.6e-15 87.8 688 26.3
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 4.7e-15 87.4 92 52.2
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 1.0e-14 86.3 92 51.1
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 1.0e-14 86.3 259 31.7
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 1.4e-14 85.9 288 28.5
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 1.8e-14 85.5 82 57.3
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 3.0e-14 84.7 571 24.2
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 4.0e-14 84.3 121 46.3
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 4.0e-14 84.3 682 24.5
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 5.2e-14 84.0 579 24.7
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 5.2e-14 84.0 90 50.0
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 5.2e-14 84.0 518 26.1
BcaB06g29099 Brassica carinata HOM05D006083 ORTHO05D007634 6.8e-14 83.6 658 27.1
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 8.8e-14 83.2 124 44.4
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 1.5e-13 82.4 477 25.6
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 2.0e-13 82.0 604 26.2
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 2.0e-13 82.0 671 25.0
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 3.4e-13 81.3 714 22.4
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 9.7e-13 79.7 327 26.9
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 1.7e-12 79.0 302 28.8
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 1.7e-12 79.0 490 25.5
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 3.7e-12 77.8 449 25.4
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 4.8e-12 77.4 246 32.1
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 6.3e-12 77.0 490 24.9
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 8.3e-12 76.6 102 46.1
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 1.1e-11 76.3 257 30.0
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 1.4e-11 75.9 283 29.7
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 3.1e-11 74.7 709 24.4
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 5.3e-11 73.9 459 25.9
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 1.2e-10 72.8 585 26.5
Lsat_1_v5_gn_7_4020 Lactuca sativa HOM05D006083 ORTHO05D007634 2.7e-10 71.6 59 62.7
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 2.7e-10 71.6 67 55.2
SEGI_22945 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 5.9e-10 70.5 83 47.0


User provided reference genes

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