Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018856 Vanilla planifolia HOM05D009170 ORTHO05D012011 3.9e-162 574.7 283 100.0
HPP92_008712 Vanilla planifolia HOM05D009170 ORTHO05D012011 1.1e-121 440.3 315 73.3
HPP92_018889 Vanilla planifolia HOM05D009170 ORTHO05D012011 7.0e-111 404.4 283 76.3
HPP92_026931 Vanilla planifolia HOM05D009170 ORTHO05D012011 6.6e-85 318.2 283 64.0
HPP92_020781 Vanilla planifolia HOM05D009170 ORTHO05D012011 2.1e-75 286.6 210 74.3
HPP92_026935 Vanilla planifolia HOM05D009170 ORTHO05D012011 5.2e-66 255.4 314 51.9
HPP92_004732 Vanilla planifolia HOM05D009170 ORTHO05D012011 4.9e-64 248.8 202 68.8
HPP92_021148 Vanilla planifolia HOM05D009170 ORTHO05D012011 1.1e-63 247.7 290 53.1
HPP92_003348 Vanilla planifolia HOM05D009170 ORTHO05D012011 5.2e-58 228.8 196 64.3
HPP92_026617 Vanilla planifolia HOM05D009170 ORTHO05D012011 1.8e-42 177.2 143 65.7
HPP92_028095 Vanilla planifolia HOM05D009170 ORTHO05D012011 7.1e-39 165.2 170 55.9
HPP92_022950 Vanilla planifolia HOM05D009170 ORTHO05D012011 2.1e-38 163.7 171 58.5
HPP92_006567 Vanilla planifolia HOM05D009170 ORTHO05D012011 7.9e-38 161.8 156 60.9
HPP92_019050 Vanilla planifolia HOM05D009170 ORTHO05D012011 9.0e-34 148.3 107 75.7
HPP92_017160 Vanilla planifolia HOM05D009170 ORTHO05D012011 3.4e-33 146.4 98 80.6
HPP92_014781 Vanilla planifolia HOM05D002931 ORTHO05D003273 8.4e-32 141.7 358 36.6
HPP92_003378 Vanilla planifolia HOM05D009170 ORTHO05D012011 2.1e-30 137.1 108 72.2
HPP92_003376 Vanilla planifolia HOM05D009170 ORTHO05D012011 1.3e-29 134.4 108 70.4
HPP92_003374 Vanilla planifolia HOM05D009170 ORTHO05D012011 8.7e-29 131.7 108 70.4
HPP92_018895 Vanilla planifolia HOM05D009170 ORTHO05D012011 8.7e-29 131.7 155 54.2
HPP92_020509 Vanilla planifolia HOM05D009170 ORTHO05D012011 4.0e-26 122.9 158 50.6
HPP92_020560 Vanilla planifolia HOM05D009170 ORTHO05D012011 5.3e-26 122.5 82 75.6
HPP92_026591 Vanilla planifolia HOM05D009170 ORTHO05D431581 3.4e-25 119.8 82 74.4
HPP92_026827 Vanilla planifolia HOM05D009170 ORTHO05D432133 2.2e-24 117.1 74 75.7
HPP92_018464 Vanilla planifolia HOM05D009170 ORTHO05D012011 1.2e-22 111.3 77 75.3
HPP92_004350 Vanilla planifolia HOM05D009170 ORTHO05D012011 2.5e-20 103.6 74 74.3
HPP92_006530 Vanilla planifolia HOM05D009170 ORTHO05D429177 8.2e-19 98.6 70 68.6
arahy.Tifrunner.gnm1.ann1.FAG6RL Arachis hypogaea HOM05D002931 ORTHO05D003273 1.1e-12 78.2 196 34.2
QL03p041904 Quercus lobata HOM05D002931 ORTHO05D003273 3.3e-12 76.6 260 32.3
arahy.Tifrunner.gnm1.ann1.QW19KK Arachis hypogaea HOM05D002931 ORTHO05D003273 1.3e-11 74.7 199 34.7
Sc16g0002250 Simmondsia chinensis HOM05D002931 ORTHO05D003273 2.8e-11 73.6 212 36.8
Sc16g0002210 Simmondsia chinensis HOM05D002931 ORTHO05D003273 4.8e-11 72.8 196 38.3
HPP92_027677 Vanilla planifolia HOM05D009170 ORTHO05D431596 3.1e-10 70.1 121 41.3
VMungo0251G1797 Vigna mungo HOM05D002931 ORTHO05D003273 1.5e-09 67.8 297 27.9
HPP92_003372 Vanilla planifolia HOM05D009170 ORTHO05D012011 2.0e-09 67.4 50 72.0
HanXRQChr12g0365801 Helianthus annuus HOM05D002931 ORTHO05D003273 3.4e-09 66.6 304 27.3
Manes.10G063900 Manihot esculenta HOM05D002931 ORTHO05D003273 7.7e-09 65.5 274 30.7
Hund04302 Selenicereus undatus HOM05D002931 ORTHO05D003273 7.7e-09 65.5 276 30.8
Gorai.002G167900 Gossypium raimondii HOM05D002931 ORTHO05D003273 3.8e-08 63.2 276 30.4
Nn4g24879 Nelumbo nucifera HOM05D002931 ORTHO05D003273 6.5e-08 62.4 260 30.8
Dinv06218 Davidia involucrata HOM05D002931 ORTHO05D003273 8.5e-08 62.0 233 31.8
Dinv28150 Davidia involucrata HOM05D002931 ORTHO05D003273 8.5e-08 62.0 238 33.6
Migut.E00661 Erythranthe guttata HOM05D002931 ORTHO05D003273 1.4e-07 61.2 314 26.4
MBI06_g12324_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 1.9e-07 60.8 288 30.2
HPP92_014094 Vanilla planifolia HOM05D009170 ORTHO05D012011 1.9e-07 60.8 54 64.8
CSS0049784 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 3.2e-07 60.1 232 31.9
Cfa021253 Carpinus fangiana HOM05D002931 ORTHO05D003273 4.2e-07 59.7 273 29.3
Duzib248G0685 Durio zibethinus HOM05D002931 ORTHO05D003273 5.5e-07 59.3 344 28.5
MD16G1008200 Malus domestica HOM05D002931 ORTHO05D003273 9.4e-07 58.5 348 25.6
CANSAT64G0742 Cannabis sativa HOM05D002931 ORTHO05D003273 1.2e-06 58.2 230 29.6
Potri.008G144200 Populus trichocarpa HOM05D002931 ORTHO05D003273 1.2e-06 58.2 240 31.2
Zm00001eb190610 Zea mays HOM05D002931 ORTHO05D003273 1.6e-06 57.8 250 29.2
Duzib251G0035 Durio zibethinus HOM05D002931 ORTHO05D003273 2.1e-06 57.4 225 31.6
Nn3g18713 Nelumbo nucifera HOM05D002931 ORTHO05D003273 7.9e-06 55.5 210 30.5


User provided reference genes

Program Settings