Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.6e-71 271.6 146 100.0
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.2e-59 231.9 146 88.4
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 5.1e-25 118.2 144 52.1
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.5e-24 116.7 146 50.0
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 5.7e-24 114.8 143 51.0
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 7.4e-24 114.4 146 49.3
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 1.2e-21 107.1 147 47.6
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 1.3e-20 103.6 141 48.9
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 1.3e-20 103.6 141 48.9
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 3.8e-20 102.1 145 45.5
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 3.8e-20 102.1 146 45.9
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 3.8e-20 102.1 144 45.1
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 5.0e-20 101.7 142 48.6
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 6.5e-20 101.3 142 46.5
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 1.9e-19 99.8 145 43.4
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 1.2e-18 97.1 135 45.2
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 1.2e-18 97.1 146 44.5
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 2.1e-18 96.3 142 45.8
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.1e-18 96.3 145 45.5
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 3.6e-18 95.5 145 44.1
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 4.7e-18 95.1 142 44.4
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 4.7e-18 95.1 142 44.4
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 4.7e-18 95.1 140 45.0
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 8.0e-18 94.4 140 45.0
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 8.0e-18 94.4 143 44.1
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.4e-17 93.6 132 43.9
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 1.4e-17 93.6 142 44.4
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.3e-17 92.8 142 44.4
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 3.0e-17 92.4 140 46.4
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 3.0e-17 92.4 140 43.6
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 8.8e-17 90.9 136 44.1
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 1.5e-16 90.1 78 60.3
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.5e-16 90.1 141 40.4
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 2.0e-16 89.7 140 42.1
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 2.6e-16 89.4 136 42.6
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.6e-16 89.4 143 44.1
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 3.3e-16 89.0 141 44.7
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 3.3e-16 89.0 141 45.4
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 9.7e-16 87.4 104 51.9
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.7e-15 86.7 144 43.1
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 1.7e-15 86.7 137 40.9
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 2.2e-15 86.3 141 41.8
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 2.8e-15 85.9 133 44.4
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 3.7e-15 85.5 142 40.1
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 4.8e-15 85.1 145 39.3
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 6.3e-15 84.7 140 42.1
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 8.2e-15 84.3 141 40.4
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.1e-14 84.0 140 40.0
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 1.1e-14 84.0 139 42.4
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 1.4e-14 83.6 143 40.6
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 1.4e-14 83.6 141 44.0
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.4e-14 83.6 141 44.0
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.8e-14 83.2 142 43.0
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 5.3e-14 81.6 148 39.2
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 5.3e-14 81.6 144 44.4
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 7.0e-14 81.3 72 58.3
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 7.0e-14 81.3 141 43.3
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 2.6e-13 79.3 143 42.0
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 5.9e-13 78.2 153 41.2
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 7.7e-13 77.8 143 41.3
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 7.7e-13 77.8 140 39.3
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.0e-12 77.4 144 39.6
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 1.0e-12 77.4 130 43.1
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.7e-12 76.6 144 39.6
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 2.9e-12 75.9 144 40.3
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.9e-12 75.9 143 42.0
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 2.9e-12 75.9 144 38.2
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 3.8e-12 75.5 142 39.4
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 6.5e-12 74.7 143 42.0
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 8.5e-12 74.3 143 44.1
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 8.5e-12 74.3 141 38.3
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 8.5e-12 74.3 134 41.8
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 8.5e-12 74.3 134 41.8
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 8.5e-12 74.3 137 38.7
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 1.1e-11 73.9 143 39.9
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 1.5e-11 73.6 148 35.8
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 2.5e-11 72.8 153 39.2
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.2e-11 72.0 136 39.7
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 7.2e-11 71.2 150 40.0
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 6.1e-10 68.2 144 38.9
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 6.1e-10 68.2 138 37.7
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 8.0e-10 67.8 133 38.3
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 8.0e-10 67.8 147 36.1
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 8.0e-10 67.8 136 40.4
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 8.0e-10 67.8 141 35.5
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.0e-09 67.4 90 45.6
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 1.0e-09 67.4 141 37.6
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 2.3e-09 66.2 126 37.3
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 3.0e-09 65.9 135 37.0
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 4.0e-09 65.5 93 45.2
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 1.5e-08 63.5 135 37.0
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 2.0e-08 63.2 125 36.8
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.6e-08 62.8 127 39.4
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 3.7e-07 58.9 96 38.5
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 9.1e-06 54.3 133 33.8
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 9.1e-06 54.3 108 39.8


User provided reference genes

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