Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 5.9e-127 457.6 241 100.0
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.0e-111 406.0 217 97.7
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.1e-76 289.7 155 99.4
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 4.5e-50 202.2 205 53.7
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 2.7e-47 193.0 189 57.1
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 4.6e-47 192.2 184 58.7
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 6.0e-47 191.8 190 57.9
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 6.0e-47 191.8 209 53.6
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 1.3e-46 190.7 196 57.1
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 2.3e-46 189.9 203 54.2
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 2.3e-46 189.9 180 57.2
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 3.0e-46 189.5 199 54.3
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 3.9e-46 189.1 203 54.7
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 1.5e-45 187.2 217 51.2
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 2.5e-45 186.4 205 52.7
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 5.7e-45 185.3 179 57.0
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.3e-44 184.1 203 50.2
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 2.8e-44 183.0 218 48.6
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 2.8e-44 183.0 179 55.3
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.7e-44 182.6 186 55.9
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 4.8e-44 182.2 214 51.4
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 6.3e-44 181.8 177 56.5
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 8.2e-44 181.4 231 47.6
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 8.2e-44 181.4 201 53.2
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 1.8e-43 180.3 162 58.6
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 1.8e-43 180.3 177 55.9
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 2.4e-43 179.9 193 53.4
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 2.4e-43 179.9 198 53.0
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 3.1e-43 179.5 182 53.8
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 3.1e-43 179.5 187 54.0
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 3.1e-43 179.5 171 52.6
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 3.1e-43 179.5 168 58.9
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 4.1e-43 179.1 238 46.6
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 5.3e-43 178.7 183 53.0
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 5.3e-43 178.7 189 51.9
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 6.9e-43 178.3 177 54.8
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.2e-42 177.6 185 54.1
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 1.5e-42 177.2 206 51.5
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 2.0e-42 176.8 216 49.5
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 2.0e-42 176.8 183 55.2
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 2.6e-42 176.4 204 51.5
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 3.4e-42 176.0 220 46.8
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 5.9e-42 175.3 227 46.3
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 5.9e-42 175.3 212 49.1
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 5.9e-42 175.3 170 53.5
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 7.6e-42 174.9 184 52.2
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 7.6e-42 174.9 192 51.6
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 7.6e-42 174.9 212 50.9
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.0e-41 174.5 184 53.8
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.0e-41 174.5 184 51.6
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 1.0e-41 174.5 190 53.2
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 1.3e-41 174.1 175 53.7
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 2.2e-41 173.3 182 52.7
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 3.8e-41 172.6 170 51.8
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 3.8e-41 172.6 184 54.3
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 3.8e-41 172.6 184 54.9
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 3.8e-41 172.6 184 54.9
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 5.0e-41 172.2 161 54.7
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 5.0e-41 172.2 222 46.8
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 5.0e-41 172.2 185 47.6
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 5.0e-41 172.2 184 52.2
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 8.5e-41 171.4 184 53.8
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 1.4e-40 170.6 181 51.9
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.5e-40 169.9 203 49.3
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.2e-40 169.5 215 47.4
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 3.2e-40 169.5 201 50.2
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 3.2e-40 169.5 170 52.4
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 4.2e-40 169.1 194 49.5
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 4.2e-40 169.1 154 56.5
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 7.2e-40 168.3 185 50.8
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 9.3e-40 167.9 149 60.4
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 9.3e-40 167.9 198 50.5
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 1.2e-39 167.5 203 49.3
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 4.6e-39 165.6 185 51.4
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 6.1e-39 165.2 185 50.8
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 6.1e-39 165.2 196 49.0
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.3e-38 164.1 196 49.5
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 1.8e-38 163.7 185 50.8
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 3.0e-38 162.9 185 50.8
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 3.0e-38 162.9 185 50.8
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 5.1e-38 162.2 163 54.6
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 6.7e-38 161.8 161 55.3
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 1.5e-37 160.6 193 50.3
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 5.7e-37 158.7 185 50.3
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 2.2e-36 156.8 209 47.4
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 6.3e-36 155.2 168 53.6
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 2.0e-34 150.2 158 55.1
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 5.9e-34 148.7 241 41.5
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 1.8e-30 137.1 162 47.5
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 2.0e-29 133.7 187 46.0
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 7.4e-29 131.7 180 47.2
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 1.3e-28 131.0 170 43.5
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 1.7e-28 130.6 153 49.7
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 4.8e-28 129.0 190 42.1
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 3.4e-26 122.9 108 57.4
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 9.4e-24 114.8 108 54.6
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 9.4e-24 114.8 108 54.6
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.7e-17 94.0 86 55.8
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 6.5e-17 92.0 91 52.7
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 3.6e-15 86.3 115 47.0
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 1.4e-14 84.3 224 31.2
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.5e-13 80.9 94 44.7
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 9.7e-13 78.2 73 52.1
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 2.8e-12 76.6 100 46.0
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.4e-06 57.8 46 63.0


User provided reference genes

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