Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 4.5e-95 351.3 181 100.0
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 2.3e-59 232.6 131 90.8
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 5.2e-59 231.5 131 89.3
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 6.7e-59 231.1 131 88.5
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 1.5e-58 229.9 129 89.1
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 2.0e-58 229.6 131 89.3
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 3.3e-58 228.8 131 88.5
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 3.3e-58 228.8 131 88.5
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 3.3e-58 228.8 131 89.3
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 3.3e-58 228.8 131 89.3
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 4.4e-58 228.4 131 88.5
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 7.5e-58 227.6 131 88.5
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 7.5e-58 227.6 131 88.5
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 7.5e-58 227.6 140 85.0
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 9.7e-58 227.3 131 87.8
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 9.7e-58 227.3 131 87.8
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 1.3e-57 226.9 131 87.8
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.3e-57 226.9 131 89.3
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.3e-57 226.9 131 86.3
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 1.3e-57 226.9 131 86.3
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 1.3e-57 226.9 133 86.5
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 1.7e-57 226.5 131 87.8
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 1.7e-57 226.5 131 87.0
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 1.7e-57 226.5 131 86.3
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 1.7e-57 226.5 131 87.8
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 1.7e-57 226.5 131 86.3
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 2.2e-57 226.1 131 86.3
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 2.2e-57 226.1 131 87.0
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 2.2e-57 226.1 131 89.3
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 2.8e-57 225.7 131 87.8
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 2.8e-57 225.7 129 86.8
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 3.7e-57 225.3 131 88.5
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 4.8e-57 224.9 131 87.0
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 4.8e-57 224.9 131 87.0
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 4.8e-57 224.9 131 87.0
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 6.3e-57 224.6 131 84.7
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 6.3e-57 224.6 131 87.0
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 6.3e-57 224.6 131 86.3
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 6.3e-57 224.6 131 86.3
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 6.3e-57 224.6 131 86.3
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 6.3e-57 224.6 131 86.3
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 6.3e-57 224.6 131 86.3
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 6.3e-57 224.6 130 86.2
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 8.3e-57 224.2 131 87.8
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 1.1e-56 223.8 131 85.5
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 1.1e-56 223.8 131 85.5
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.4e-56 223.4 131 86.3
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.4e-56 223.4 131 86.3
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.4e-56 223.4 131 87.8
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 1.4e-56 223.4 131 85.5
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 1.4e-56 223.4 131 86.3
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 1.4e-56 223.4 131 85.5
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 1.8e-56 223.0 131 85.5
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 2.4e-56 222.6 131 84.7
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.4e-56 222.6 131 85.5
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 2.4e-56 222.6 131 87.0
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 2.4e-56 222.6 137 81.0
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 3.1e-56 222.2 131 84.7
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 3.1e-56 222.2 131 85.5
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 3.1e-56 222.2 131 85.5
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 4.1e-56 221.9 131 84.7
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.1e-56 221.9 131 85.5
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 5.3e-56 221.5 131 85.5
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 5.3e-56 221.5 131 85.5
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 5.3e-56 221.5 131 85.5
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 5.3e-56 221.5 131 84.7
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 5.3e-56 221.5 137 80.3
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 5.3e-56 221.5 131 85.5
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.0e-56 221.1 131 83.2
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 7.0e-56 221.1 131 84.7
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 9.1e-56 220.7 131 85.5
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 9.1e-56 220.7 129 86.8
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 9.1e-56 220.7 131 85.5
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 9.1e-56 220.7 131 85.5
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 1.2e-55 220.3 131 84.0
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 1.6e-55 219.9 131 84.7
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 1.6e-55 219.9 131 83.2
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 1.6e-55 219.9 131 84.0
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 1.6e-55 219.9 131 84.0
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 2.0e-55 219.5 131 84.0
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 2.0e-55 219.5 131 83.2
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 2.0e-55 219.5 131 83.2
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 2.7e-55 219.2 134 82.1
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 2.7e-55 219.2 131 84.0
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 3.5e-55 218.8 131 82.4
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 3.5e-55 218.8 131 83.2
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 3.5e-55 218.8 126 86.5
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 3.5e-55 218.8 131 81.7
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 3.5e-55 218.8 131 83.2
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 3.5e-55 218.8 129 83.7
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 5.9e-55 218.0 131 80.9
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 7.7e-55 217.6 131 82.4
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 7.7e-55 217.6 131 82.4
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 1.0e-54 217.2 129 83.7
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 1.0e-54 217.2 129 83.7
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 1.0e-54 217.2 131 84.7
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 1.0e-54 217.2 126 85.7
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 1.3e-54 216.9 131 82.4
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 1.3e-54 216.9 131 83.2
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 1.3e-54 216.9 131 83.2
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 1.7e-54 216.5 131 81.7
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 2.2e-54 216.1 129 83.7
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 2.2e-54 216.1 131 82.4
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 5.0e-54 214.9 126 84.1
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 5.0e-54 214.9 126 84.1
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 5.0e-54 214.9 126 84.1
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 5.0e-54 214.9 126 84.1
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 5.0e-54 214.9 126 84.1
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 5.0e-54 214.9 126 84.1
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 5.0e-54 214.9 126 84.1
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 6.5e-54 214.5 126 84.1
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 1.1e-53 213.8 126 84.1
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 1.1e-53 213.8 126 84.1
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 1.1e-53 213.8 126 83.3
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 1.1e-53 213.8 126 83.3
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 1.1e-53 213.8 126 83.3
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 1.1e-53 213.8 126 84.1
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 1.5e-53 213.4 131 82.4
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 3.2e-53 212.2 115 92.2
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 5.5e-53 211.5 131 80.9
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 7.2e-53 211.1 130 81.5
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 1.2e-52 210.3 123 85.4
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 1.2e-52 210.3 123 85.4
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 1.6e-52 209.9 115 90.4
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 2.1e-52 209.5 129 82.2
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.1e-52 209.5 131 80.9
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 3.6e-52 208.8 115 90.4
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 4.7e-52 208.4 131 80.9
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 6.1e-52 208.0 133 79.7
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 1.0e-51 207.2 115 89.6
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.4e-51 206.8 131 82.4
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 1.4e-51 206.8 131 80.9
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 2.3e-51 206.1 123 83.7
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 3.0e-51 205.7 131 79.4
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 1.5e-50 203.4 139 75.5
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 4.4e-50 201.8 139 74.8
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 5.7e-50 201.4 110 90.9
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 1.7e-49 199.9 115 87.0
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.7e-49 199.9 111 87.4
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 2.4e-48 196.1 166 65.7
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 2.7e-47 192.6 131 73.3
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 4.5e-47 191.8 156 67.3
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 5.9e-47 191.4 122 75.4
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 1.0e-46 190.7 122 78.7
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.0e-46 190.7 179 58.7
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 1.3e-46 190.3 118 78.0
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 1.1e-45 187.2 125 71.2
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 1.5e-45 186.8 129 76.7
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 1.9e-45 186.4 100 92.0
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 3.6e-44 182.2 121 73.6
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 6.1e-44 181.4 117 80.3
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.0e-43 178.7 105 80.0
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.0e-43 178.7 105 80.0
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.0e-43 178.7 129 68.2
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 3.7e-41 172.2 102 78.4
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.1e-40 170.6 115 77.4
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.1e-40 170.6 115 77.4
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 3.1e-40 169.1 98 81.6
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 2.9e-38 162.5 131 68.7
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 6.6e-38 161.4 120 65.8
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 7.3e-37 157.9 89 88.8
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 2.1e-36 156.4 115 65.2
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.0e-35 154.1 102 71.6
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.4e-35 153.7 129 65.1
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 1.4e-35 153.7 103 77.7
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 2.0e-34 149.8 114 59.6
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 3.4e-34 149.1 82 85.4
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 5.8e-34 148.3 82 87.8
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 1.4e-32 143.7 82 84.1
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 1.2e-26 124.0 78 78.2
AagrBONN_evm.TU.Sc2ySwM_368.148 Anthoceros agrestis HOM05D003908 ORTHO05D004488 7.5e-26 121.3 77 77.9
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 2.2e-25 119.8 113 58.4
Lalb_Chr20g0122801 Lupinus albus HOM05D003908 ORTHO05D004488 4.9e-25 118.6 80 73.8
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 3.2e-24 115.9 117 47.0
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 4.1e-24 115.5 63 88.9
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 4.6e-23 112.1 68 79.4
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 1.9e-21 106.7 76 75.0
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 8.1e-20 101.3 67 76.1
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 2.3e-19 99.8 52 90.4
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 3.1e-19 99.4 52 90.4
SHI24544 Sapria himalayana HOM05D003908 ORTHO05D000023 7.5e-18 94.7 67 68.7
Sopen12g012850 Solanum pennellii HOM05D003908 ORTHO05D004488 4.3e-13 79.0 58 70.7
AUR62011951 Chenopodium quinoa HOM05D003908 ORTHO05D004488 5.2e-11 72.0 48 70.8
Peaxi162Scf01294g00317 Petunia axillaris HOM05D003908 ORTHO05D004488 1.2e-10 70.9 35 88.6
CSS0012932 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 3.4e-10 69.3 35 82.9


User provided reference genes

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