Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 0.0e+00 1166.4 594 100.0
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 1.7e-255 885.9 568 78.3
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 5.0e-252 874.4 572 77.8
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 8.8e-249 863.6 595 74.8
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 4.4e-248 861.3 580 76.4
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 9.7e-248 860.1 569 76.6
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 1.7e-247 859.4 570 76.7
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 4.8e-247 857.8 568 77.8
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 6.3e-247 857.4 570 76.5
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 4.1e-246 854.7 570 76.8
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 5.9e-245 850.9 570 76.1
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 5.9e-245 850.9 572 75.9
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 1.0e-244 850.1 569 76.1
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 1.3e-244 849.7 594 73.6
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 2.2e-244 849.0 569 75.4
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 3.8e-244 848.2 572 75.5
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 8.5e-244 847.0 569 76.1
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 8.5e-244 847.0 572 75.3
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 1.9e-243 845.9 555 77.8
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 5.5e-243 844.3 572 75.2
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 1.6e-242 842.8 568 75.4
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 2.1e-242 842.4 569 75.6
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 2.7e-242 842.0 566 76.1
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 3.6e-242 841.6 565 75.2
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 4.7e-242 841.3 571 74.8
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 6.1e-242 840.9 580 74.7
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 1.8e-241 839.3 570 74.9
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 3.0e-241 838.6 567 74.8
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 4.0e-241 838.2 567 75.1
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 6.8e-241 837.4 581 74.4
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 8.8e-241 837.0 565 74.5
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 8.8e-241 837.0 569 74.9
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 1.2e-240 836.6 566 75.4
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 2.0e-240 835.9 616 71.1
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 2.0e-240 835.9 580 74.5
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 4.4e-240 834.7 589 72.8
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 4.4e-240 834.7 578 74.0
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 1.3e-239 833.2 579 74.3
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 6.3e-239 830.9 567 75.5
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 1.1e-238 830.1 584 72.8
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 1.1e-238 830.1 564 74.3
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 2.0e-237 825.9 567 74.1
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 2.0e-237 825.9 564 74.3
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 2.7e-237 825.5 579 73.7
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 2.7e-237 825.5 581 73.0
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 3.5e-237 825.1 566 74.6
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 4.5e-237 824.7 607 70.0
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.0e-236 823.5 563 74.4
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 2.9e-236 822.0 567 74.3
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 5.0e-236 821.2 605 71.6
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 5.0e-236 821.2 585 73.2
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 1.5e-235 819.7 568 73.6
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 1.5e-235 819.7 567 73.5
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 1.9e-235 819.3 570 73.3
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 2.5e-235 818.9 566 74.7
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 5.5e-235 817.8 563 73.9
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 5.5e-235 817.8 581 73.7
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 7.2e-235 817.4 609 69.3
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 9.4e-235 817.0 581 73.5
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 9.4e-235 817.0 581 73.8
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 2.7e-234 815.5 572 74.5
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 1.0e-233 813.5 568 73.4
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 1.4e-233 813.1 568 73.4
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 4.0e-233 811.6 572 72.4
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 1.5e-232 809.7 569 73.5
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 3.1e-230 802.0 568 72.7
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 3.1e-230 802.0 568 72.4
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 4.5e-229 798.1 583 71.7
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 7.7e-229 797.3 561 73.1
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 1.7e-228 796.2 568 72.2
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 2.9e-228 795.4 569 71.2
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 2.9e-228 795.4 569 71.7
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 2.9e-228 795.4 569 71.7
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 1.9e-227 792.7 560 72.5
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 9.5e-227 790.4 569 71.0
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 9.5e-227 790.4 569 71.0
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 9.5e-227 790.4 569 71.0
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 9.5e-227 790.4 569 71.0
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 9.5e-227 790.4 570 70.9
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 2.1e-226 789.3 569 71.4
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 3.4e-224 781.9 568 72.0
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 7.5e-224 780.8 569 70.3
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 8.3e-223 777.3 568 70.8
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 1.1e-222 776.9 673 62.0
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.4e-222 776.5 572 70.5
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 5.0e-220 768.1 568 70.1
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 1.1e-219 766.9 517 75.4
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 1.5e-219 766.5 537 73.6
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 2.3e-212 742.7 469 78.7
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 3.2e-206 722.2 606 63.0
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 5.1e-196 688.3 611 58.6
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 1.2e-192 677.2 569 63.6
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 1.2e-192 677.2 1076 41.3
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 1.2e-184 650.6 418 76.3
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 2.7e-181 639.4 574 59.9
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 6.2e-178 628.2 640 56.2
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 2.3e-172 609.8 511 61.3
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 2.8e-154 549.7 386 72.3
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 1.3e-143 514.2 424 62.7
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 9.4e-134 481.5 484 52.3
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 2.8e-122 443.4 575 45.2
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 2.7e-120 436.8 268 82.1
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 5.2e-116 422.5 586 42.3
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 6.6e-103 379.0 232 79.7
Dinv41809 Davidia involucrata HOM05D001176 ORTHO05D007019 7.5e-99 365.5 275 69.8
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 1.4e-89 334.7 315 58.4
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 8.4e-82 308.9 348 48.9
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 9.6e-78 295.4 571 38.7
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 4.0e-76 290.0 573 38.2
vmacro00085 Vaccinium macrocarpon HOM05D001176 ORTHO05D007019 1.5e-75 288.1 298 56.0
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 7.6e-75 285.8 556 38.5
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 2.0e-67 261.2 173 77.5
Hund16023 Selenicereus undatus HOM05D001176 ORTHO05D007019 4.5e-67 260.0 203 69.0
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 3.3e-62 243.8 171 69.0
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea HOM05D001176 ORTHO05D007019 1.4e-44 185.3 136 69.9
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea HOM05D001176 ORTHO05D007019 1.4e-44 185.3 136 69.9
Glyma.01G154501 Glycine max HOM05D001176 ORTHO05D007019 6.9e-36 156.4 101 75.2
Glyma.01G154450 Glycine max HOM05D001176 ORTHO05D007019 1.7e-34 151.8 122 66.4
MD13G1243900 Malus domestica HOM05D001176 ORTHO05D007019 1.0e-23 115.9 154 46.1
FAN15G2248 Fragaria x ananassa HOM05D001176 ORTHO05D007019 6.1e-16 90.1 96 51.0
TPR.G11479 Trifolium pratense HOM05D001176 ORTHO05D007019 1.0e-15 89.4 64 71.9
Glyma.01G154551 Glycine max HOM05D001176 ORTHO05D214389 1.3e-10 72.4 71 56.3


User provided reference genes

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