Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 4.7e-94 347.8 173 100.0
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 7.9e-57 224.2 181 66.3
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 8.2e-54 214.2 215 58.1
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 1.1e-53 213.8 204 58.8
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 1.1e-53 213.8 217 55.8
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 3.4e-52 208.8 204 58.3
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 5.8e-52 208.0 202 57.9
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 7.6e-52 207.6 217 54.8
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.0e-51 207.2 180 61.7
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 2.9e-51 205.7 218 57.3
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 3.8e-51 205.3 217 58.5
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 6.5e-51 204.5 211 55.9
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 8.4e-51 204.1 199 56.8
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.4e-50 203.4 180 60.6
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.4e-50 203.4 180 60.6
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 1.4e-50 203.4 217 55.3
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 1.9e-50 203.0 210 58.6
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 1.9e-50 203.0 218 57.8
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 4.2e-50 201.8 199 58.8
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 5.5e-50 201.4 206 56.3
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 7.1e-50 201.1 218 56.4
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 7.1e-50 201.1 191 59.2
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 1.2e-49 200.3 209 56.0
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 1.2e-49 200.3 166 63.3
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 1.2e-49 200.3 187 59.4
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 1.2e-49 200.3 182 62.1
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 1.2e-49 200.3 206 55.8
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 1.6e-49 199.9 187 59.9
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 2.1e-49 199.5 199 56.8
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.1e-49 199.5 220 55.0
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.5e-49 198.7 205 56.6
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 4.6e-49 198.4 198 57.1
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 7.9e-49 197.6 185 61.1
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 7.9e-49 197.6 199 57.8
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 1.8e-48 196.4 211 53.1
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.8e-48 196.4 212 53.8
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.8e-48 196.4 214 55.6
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.8e-48 196.4 196 58.2
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.8e-48 196.4 166 62.7
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 2.3e-48 196.1 189 59.8
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 3.9e-48 195.3 206 54.9
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 5.1e-48 194.9 181 59.7
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 6.7e-48 194.5 206 52.4
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 6.7e-48 194.5 200 58.5
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 8.7e-48 194.1 170 59.4
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 8.7e-48 194.1 213 54.9
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.1e-47 193.7 206 55.3
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 1.1e-47 193.7 189 59.3
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 1.5e-47 193.4 181 58.0
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 1.9e-47 193.0 185 57.3
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 2.5e-47 192.6 207 55.6
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 2.5e-47 192.6 206 54.4
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 3.3e-47 192.2 209 53.6
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 5.7e-47 191.4 201 57.7
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 9.7e-47 190.7 181 59.1
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 1.6e-46 189.9 185 56.2
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 2.2e-46 189.5 167 58.7
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 2.2e-46 189.5 182 58.8
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.8e-46 189.1 202 54.5
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 3.7e-46 188.7 188 56.4
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.7e-46 188.7 202 54.5
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 4.8e-46 188.3 181 58.0
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 8.2e-46 187.6 188 56.4
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 8.2e-46 187.6 202 54.0
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 8.2e-46 187.6 212 51.4
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.8e-45 186.4 166 61.4
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 5.3e-45 184.9 186 55.9
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 5.3e-45 184.9 191 56.0
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 6.9e-45 184.5 184 58.2
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 9.0e-45 184.1 188 55.3
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 9.0e-45 184.1 186 55.9
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 1.2e-44 183.7 213 51.2
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 1.2e-44 183.7 200 53.0
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 1.5e-44 183.3 205 51.2
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 2.0e-44 183.0 224 50.0
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 2.6e-44 182.6 185 54.1
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 4.5e-44 181.8 202 54.5
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 5.9e-44 181.4 174 57.5
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 5.9e-44 181.4 224 50.0
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 5.9e-44 181.4 181 56.4
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 7.7e-44 181.0 179 54.7
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 1.0e-43 180.6 185 54.1
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 3.8e-43 178.7 220 49.1
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 5.0e-43 178.3 192 53.6
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 6.5e-43 177.9 193 53.4
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 6.5e-43 177.9 174 56.3
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 1.1e-42 177.2 185 53.0
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 1.1e-42 177.2 185 53.0
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 1.1e-42 177.2 185 53.0
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 1.1e-42 177.2 185 56.2
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 1.1e-42 177.2 164 59.8
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 1.4e-42 176.8 171 58.5
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 2.5e-42 176.0 171 58.5
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 3.2e-42 175.6 177 55.9
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 3.2e-42 175.6 187 57.2
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.2e-42 175.6 175 57.7
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 3.2e-42 175.6 178 57.3
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 4.2e-42 175.3 165 56.4
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 4.2e-42 175.3 196 51.0
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 4.2e-42 175.3 185 52.4
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 4.2e-42 175.3 186 53.8
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 4.2e-42 175.3 212 51.4
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 5.5e-42 174.9 171 58.5
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 7.2e-42 174.5 171 57.9
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 7.2e-42 174.5 162 62.3
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 7.9e-41 171.0 196 50.5
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 3.9e-40 168.7 210 48.1
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 6.7e-40 167.9 217 47.0
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 8.8e-40 167.5 205 45.9
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.3e-38 163.7 169 56.8
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 6.3e-38 161.4 208 47.1
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 2.4e-37 159.5 183 51.4
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 6.9e-37 157.9 168 53.0
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 1.7e-35 153.3 230 43.0
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 2.9e-35 152.5 176 50.6
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 1.2e-33 147.1 150 56.0
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.6e-33 146.7 144 56.2
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 3.6e-33 145.6 144 55.6
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 4.8e-30 135.2 154 53.2
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 4.8e-30 135.2 154 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 1.4e-29 133.7 162 50.0
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 8.5e-27 124.4 78 74.4
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 7.2e-26 121.3 232 36.6
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 6.1e-25 118.2 97 56.7
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 4.0e-24 115.5 143 52.4
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 2.6e-23 112.8 138 52.2
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 2.8e-22 109.4 148 47.3
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 2.6e-20 102.8 124 43.5
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 5.5e-10 68.6 46 76.1
Gorai.011G083100 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.7e-09 66.2 78 48.7


User provided reference genes

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