Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.4e-156 556.2 286 100.0
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.0e-141 504.6 258 99.6
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.7e-88 330.1 261 67.0
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.4e-87 326.2 255 66.3
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.2e-86 323.9 246 65.4
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.6e-86 323.6 255 65.9
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 6.6e-85 318.2 236 69.1
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.9e-84 316.6 265 62.3
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 4.3e-84 315.5 247 65.6
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.8e-83 312.8 253 63.2
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.1e-82 309.3 258 63.6
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.3e-82 308.5 256 62.1
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 6.9e-82 308.1 259 61.4
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 9.0e-82 307.8 259 61.8
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 9.0e-82 307.8 235 66.0
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.0e-81 306.6 235 66.0
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 2.6e-81 306.2 255 60.8
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.8e-81 305.1 235 65.1
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.8e-81 305.1 235 65.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 9.9e-81 304.3 263 60.8
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.3e-80 303.9 241 63.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.3e-80 303.9 250 61.2
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.3e-80 303.9 154 100.0
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.8e-80 302.4 258 59.7
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 6.4e-80 301.6 247 62.3
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 1.1e-79 300.8 247 61.9
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.1e-79 300.8 254 60.2
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.4e-79 299.7 245 63.3
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 2.4e-79 299.7 247 61.9
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 3.2e-79 299.3 249 62.2
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 4.2e-79 298.9 232 63.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.2e-79 298.9 258 60.1
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 5.4e-79 298.5 247 61.5
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 7.1e-79 298.1 229 64.2
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.6e-78 297.0 249 61.8
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 3.5e-78 295.8 283 56.9
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.5e-78 295.8 253 61.3
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 3.5e-78 295.8 236 63.6
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 3.5e-78 295.8 253 61.3
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 6.0e-78 295.0 238 58.8
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 7.9e-78 294.7 230 62.2
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.0e-77 294.3 244 61.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 1.0e-77 294.3 244 61.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 1.0e-77 294.3 244 61.1
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.3e-77 293.9 256 60.5
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.3e-77 293.9 240 59.6
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 3.0e-77 292.7 247 60.7
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 5.1e-77 292.0 229 64.2
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 6.6e-77 291.6 258 59.7
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.1e-76 290.8 262 58.0
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.5e-76 290.4 258 58.9
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.9e-76 290.0 258 58.1
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.9e-76 290.0 257 60.7
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 2.5e-76 289.7 248 59.3
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.3e-76 288.9 258 59.3
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 4.3e-76 288.9 239 58.6
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.6e-76 288.5 265 58.9
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 5.6e-76 288.5 239 58.2
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 7.4e-76 288.1 264 59.8
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.3e-75 287.3 254 57.9
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.3e-75 287.3 253 58.9
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.6e-75 287.0 256 58.6
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.6e-75 287.0 239 58.2
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.6e-75 285.8 259 59.1
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 3.6e-75 285.8 260 59.2
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 4.8e-75 285.4 260 58.5
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 4.8e-75 285.4 239 61.1
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.8e-75 285.4 240 60.8
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 6.2e-75 285.0 244 59.8
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 6.2e-75 285.0 244 59.8
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.1e-74 284.3 232 61.6
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.4e-74 283.9 261 57.9
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.8e-74 283.5 256 57.0
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 2.4e-74 283.1 260 57.7
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 3.1e-74 282.7 236 62.7
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 6.9e-74 281.6 228 62.3
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 2.6e-73 279.6 239 59.8
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 4.5e-73 278.9 235 60.4
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 9.9e-73 277.7 229 59.8
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.9e-73 277.7 239 57.7
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.7e-72 276.9 253 58.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.7e-72 276.9 240 59.6
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 6.4e-72 275.0 229 58.5
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 8.4e-72 274.6 244 57.8
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.2e-71 272.7 238 57.6
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.5e-71 271.9 249 58.6
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 9.3e-71 271.2 282 52.1
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.2e-70 270.8 261 53.6
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.5e-68 263.8 251 57.8
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 9.6e-68 261.2 233 57.1
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 8.1e-67 258.1 242 54.5
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 5.3e-66 255.4 255 54.9
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.2e-65 254.2 217 60.4
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.7e-64 250.4 236 57.6
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.1e-58 229.6 240 52.1
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.5e-57 227.3 259 46.3
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.6e-57 226.5 239 51.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 7.6e-57 224.9 183 56.8
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.1e-54 215.3 254 46.5
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.8e-53 213.8 261 46.4
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 6.5e-48 195.3 196 55.1
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 7.4e-44 181.8 90 100.0
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.0e-41 173.7 129 68.2
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.7e-35 152.9 204 44.6
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.6e-33 147.5 128 56.2
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 8.5e-32 141.7 135 58.5
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.3e-28 129.8 145 51.0
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.4e-21 107.8 101 51.5
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.7e-20 102.4 81 65.4
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 2.7e-17 93.6 199 35.7
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.5e-17 93.2 127 45.7
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.3e-11 74.7 108 38.0
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 8.3e-11 72.0 70 52.9
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 2.4e-10 70.5 122 35.2
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.2e-10 68.6 55 63.6
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 1.7e-08 64.3 215 28.8
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 7.3e-07 58.9 159 32.1
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 9.5e-07 58.5 189 28.6
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-06 58.2 81 43.2
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.7e-06 56.2 50 54.0


User provided reference genes

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