Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018621 Vanilla planifolia HOM05D000492 ORTHO05D428083 7.0e-96 354.0 183 100.0
HPP92_015640 Vanilla planifolia HOM05D000492 ORTHO05D000499 4.6e-15 85.5 171 42.1
HPP92_013929 Vanilla planifolia HOM05D000492 ORTHO05D000499 6.7e-14 81.6 202 39.6
HPP92_012177 Vanilla planifolia HOM05D000492 ORTHO05D000499 1.1e-11 74.3 202 38.6
Glyma.02G195400 Glycine max HOM05D000492 ORTHO05D000499 4.5e-10 68.9 161 36.6
Lj5g0002353 Lotus japonicus HOM05D000492 ORTHO05D000499 5.0e-09 65.5 160 36.2
Actinidia37754 Actinidia chinensis HOM05D000492 ORTHO05D000499 1.1e-08 64.3 170 35.9
arahy.Tifrunner.gnm1.ann1.J5SZ1I Arachis hypogaea HOM05D000492 ORTHO05D000499 1.4e-08 63.9 156 35.9
Lalb_Chr20g0111321 Lupinus albus HOM05D000492 ORTHO05D000499 1.4e-08 63.9 158 34.8
Os03g0787000 Oryza sativa ssp. japonica HOM05D000492 ORTHO05D000499 1.4e-08 63.9 192 34.4
CANSAT64G2598 Cannabis sativa HOM05D000492 ORTHO05D000499 1.9e-08 63.5 162 35.2
Gohir.A04G055000 Gossypium hirsutum HOM05D000492 ORTHO05D000499 2.5e-08 63.2 173 35.8
Potri.016G068600 Populus trichocarpa HOM05D000492 ORTHO05D000499 2.5e-08 63.2 160 34.4
Sc01g0005450 Simmondsia chinensis HOM05D000492 ORTHO05D000499 2.5e-08 63.2 166 34.3
Sed0009710 Sechium edule HOM05D000492 ORTHO05D000499 3.2e-08 62.8 150 36.0
Duzib106G0109 Durio zibethinus HOM05D000492 ORTHO05D000499 4.2e-08 62.4 168 35.7
Thecc.05G106300 Theobroma cacao HOM05D000492 ORTHO05D000499 4.2e-08 62.4 162 35.8
Aa31LG3G5300 Aethionema arabicum HOM05D000492 ORTHO05D000499 5.5e-08 62.0 164 33.5
Phvul.007G267200 Phaseolus vulgaris HOM05D000492 ORTHO05D000499 5.5e-08 62.0 160 33.8
arahy.Tifrunner.gnm1.ann1.IYQQ1I Arachis hypogaea HOM05D000492 ORTHO05D000499 7.2e-08 61.6 160 35.0
arahy.Tifrunner.gnm1.ann1.SR9RXI Arachis hypogaea HOM05D000492 ORTHO05D000499 7.2e-08 61.6 160 35.0
Carub.0003s1117 Capsella rubella HOM05D000492 ORTHO05D000499 7.2e-08 61.6 155 33.5
Cpa.g.sc104.12 Carica papaya HOM05D000492 ORTHO05D000499 7.2e-08 61.6 158 34.8
CsaV3_3G038070 Cucumis sativus L. HOM05D000492 ORTHO05D000499 7.2e-08 61.6 150 34.7
Gohir.A09G133500 Gossypium hirsutum HOM05D000492 ORTHO05D000499 7.2e-08 61.6 163 36.2
Gohir.D04G092500 Gossypium hirsutum HOM05D000492 ORTHO05D000499 7.2e-08 61.6 173 35.3
ClCG10G018250 Citrullus lanatus HOM05D000492 ORTHO05D000499 9.4e-08 61.2 150 34.7
Ciclev10012164m.g Citrus clementina HOM05D000492 ORTHO05D000499 9.4e-08 61.2 155 34.8
MELO3C009548.2 Cucumis melo HOM05D000492 ORTHO05D000499 9.4e-08 61.2 150 34.7
Migut.L01824 Erythranthe guttata HOM05D000492 ORTHO05D000499 9.4e-08 61.2 163 33.7
Nn6g34647 Nelumbo nucifera HOM05D000492 ORTHO05D000499 9.4e-08 61.2 150 35.3
Solyc01g006950.3 Solanum lycopersicum HOM05D000492 ORTHO05D000499 9.4e-08 61.2 154 35.7
Sopen01g002940 Solanum pennellii HOM05D000492 ORTHO05D000499 9.4e-08 61.2 154 35.7
COL.COLO4_29542 Corchorus olitorius HOM05D005131 ORTHO05D006645 1.2e-07 60.8 156 34.6
Glyma.10G082500 Glycine max HOM05D000492 ORTHO05D000499 1.2e-07 60.8 159 32.7
Gohir.D09G129700 Gossypium hirsutum HOM05D000492 ORTHO05D000499 1.2e-07 60.8 168 36.3
Gorai.006G148600 Gossypium raimondii HOM05D000492 ORTHO05D000499 1.2e-07 60.8 168 36.3
Gorai.009G394100 Gossypium raimondii HOM05D000492 ORTHO05D000499 1.2e-07 60.8 169 34.3
MD14G1040900 Malus domestica HOM05D000492 ORTHO05D000499 1.2e-07 60.8 172 31.4
unitig_22.g5141 Utricularia gibba HOM05D000492 ORTHO05D000499 1.2e-07 60.8 156 34.0
Duzib128G0276 Durio zibethinus HOM05D000492 ORTHO05D000499 1.6e-07 60.5 160 33.8
Manes.09G044600 Manihot esculenta HOM05D000492 ORTHO05D000499 1.6e-07 60.5 154 35.1
VMungo0720G0091 Vigna mungo HOM05D000492 ORTHO05D000499 1.6e-07 60.5 157 34.4
Cfa020047 Carpinus fangiana HOM05D000492 ORTHO05D000499 2.1e-07 60.1 159 34.0
CiPaw.09G021600 Carya illinoinensis HOM05D000492 ORTHO05D000499 2.1e-07 60.1 160 35.0
Eucgr.A02574 Eucalyptus grandis HOM05D000492 ORTHO05D000499 2.1e-07 60.1 160 33.1
CSS0012390 Camellia sinensis var. sinensis HOM05D000492 ORTHO05D000499 2.7e-07 59.7 153 34.6
Duzib093G1305 Durio zibethinus HOM05D000492 ORTHO05D000499 2.7e-07 59.7 159 34.6
Migut.J00691 Erythranthe guttata HOM05D000492 ORTHO05D000499 2.7e-07 59.7 161 31.1
Glyma.10G082400 Glycine max HOM05D000492 ORTHO05D000499 2.7e-07 59.7 159 34.0
Lj5g0025575 Lotus japonicus HOM05D000492 ORTHO05D000499 2.7e-07 59.7 165 32.1
Nitab4.5_0005939g0020 Nicotiana tabacum HOM05D000492 ORTHO05D000499 2.7e-07 59.7 161 34.2
Sabra06G0155500 Salix brachista HOM05D000492 ORTHO05D000499 2.7e-07 59.7 156 34.6
PGSC0003DMG400021331 Solanum tuberosum HOM05D000492 ORTHO05D000499 2.7e-07 59.7 154 35.1
Aqoxy1G00637 Aquilegia oxysepala HOM05D000492 ORTHO05D000499 3.6e-07 59.3 151 34.4
BcaC05g29322 Brassica carinata HOM05D000492 ORTHO05D000499 3.6e-07 59.3 150 34.0
A05p37530 Brassica napus HOM05D000492 ORTHO05D000499 3.6e-07 59.3 150 34.0
C05p56090 Brassica napus HOM05D000492 ORTHO05D000499 3.6e-07 59.3 150 34.0
BolC5t34276H Brassica oleracea HOM05D000492 ORTHO05D000499 3.6e-07 59.3 150 34.0
Cc06_g06680 Coffea canephora HOM05D000492 ORTHO05D000499 3.6e-07 59.3 153 34.6
Lsat_1_v5_gn_2_54080 Lactuca sativa HOM05D000492 ORTHO05D000499 3.6e-07 59.3 160 33.8
Manes.08G034400 Manihot esculenta HOM05D000492 ORTHO05D000499 3.6e-07 59.3 150 33.3
Sopen10g032370 Solanum pennellii HOM05D000492 ORTHO05D000499 3.6e-07 59.3 153 34.6
Migut.L01825 Erythranthe guttata HOM05D000492 ORTHO05D000499 4.6e-07 58.9 163 33.1
HanXRQChr05g0132561 Helianthus annuus HOM05D000492 ORTHO05D000499 4.6e-07 58.9 160 34.4
QL07p036372 Quercus lobata HOM05D000492 ORTHO05D000499 4.6e-07 58.9 150 34.7
PGSC0003DMG400028145 Solanum tuberosum HOM05D000492 ORTHO05D000499 4.6e-07 58.9 153 34.6
TWI77G0201 Tripterygium wilfordii HOM05D000492 ORTHO05D000499 4.6e-07 58.9 158 34.2
BcaB06g25573 Brassica carinata HOM05D000492 ORTHO05D000499 6.1e-07 58.5 155 34.8
Thhalv10021072m.g Eutrema salsugineum HOM05D000492 ORTHO05D000499 6.1e-07 58.5 155 33.5
Hma1.2p1_0079F.1_g041740 Hydrangea macrophylla HOM05D000492 ORTHO05D000499 6.1e-07 58.5 160 32.5
Potri.006G202200 Populus trichocarpa HOM05D000492 ORTHO05D000499 6.1e-07 58.5 156 34.0
PGR004G0916 Punica granatum HOM05D000492 ORTHO05D000499 6.1e-07 58.5 162 34.0
arahy.Tifrunner.gnm1.ann1.F2MSTS Arachis hypogaea HOM05D000492 ORTHO05D000499 7.9e-07 58.2 152 33.6
arahy.Tifrunner.gnm1.ann1.LWR4SS Arachis hypogaea HOM05D000492 ORTHO05D000499 7.9e-07 58.2 152 33.6
BraA05t22551Z Brassica rapa HOM05D000492 ORTHO05D000499 7.9e-07 58.2 150 33.3
CAN.G674.3 Capsicum annuum HOM05D000492 ORTHO05D000499 7.9e-07 58.2 153 34.6
CAN.G911.39 Capsicum annuum HOM05D000492 ORTHO05D000499 7.9e-07 58.2 167 33.5
CiPaw.10G018700 Carya illinoinensis HOM05D000492 ORTHO05D000499 7.9e-07 58.2 151 33.8
MD12G1041700 Malus domestica HOM05D000492 ORTHO05D000499 7.9e-07 58.2 161 31.1
Peaxi162Scf00611g00052 Petunia axillaris HOM05D000492 ORTHO05D000499 7.9e-07 58.2 153 34.0
SGA_v2.0_scaffold159G37629 Striga asiatica HOM05D000492 ORTHO05D000499 7.9e-07 58.2 163 33.7
Eucgr.K01922 Eucalyptus grandis HOM05D000492 ORTHO05D000499 1.0e-06 57.8 155 32.9
Thhalv10010514m.g Eutrema salsugineum HOM05D000492 ORTHO05D000499 1.0e-06 57.8 159 30.8
Peaxi162Scf00211g00310 Petunia axillaris HOM05D000492 ORTHO05D000499 1.0e-06 57.8 153 34.6
Phvul.007G267300 Phaseolus vulgaris HOM05D000492 ORTHO05D000499 1.0e-06 57.8 157 33.8
RcHm_v2.0_Chr3g0476321 Rosa chinensis HOM05D000492 ORTHO05D000499 1.0e-06 57.8 159 34.6
Sp3g10050 Schrenkiella parvula HOM05D000492 ORTHO05D000499 1.0e-06 57.8 162 32.7
SGA_v2.0_scaffold184G40013 Striga asiatica HOM05D000492 ORTHO05D000499 1.0e-06 57.8 153 33.3
TPR.G2816 Trifolium pratense HOM05D000492 ORTHO05D000499 1.0e-06 57.8 162 30.9
AL3G23380 Arabidopsis lyrata HOM05D000492 ORTHO05D000499 1.4e-06 57.4 155 32.9
CARHR086370 Cardamine hirsuta HOM05D000492 ORTHO05D000499 1.4e-06 57.4 162 33.3
Ca_11678_v3 Cicer arietinum L. HOM05D000492 ORTHO05D000499 1.4e-06 57.4 150 32.0
HanXRQChr02g0053281 Helianthus annuus HOM05D000492 ORTHO05D000499 1.4e-06 57.4 158 32.9
Lalb_Chr02g0154411 Lupinus albus HOM05D000492 ORTHO05D000499 1.4e-06 57.4 162 31.5
Rhsim03G0063900 Rhododendron simsii HOM05D000492 ORTHO05D000499 1.4e-06 57.4 156 34.0
Solyc10g081850.3 Solanum lycopersicum HOM05D000492 ORTHO05D000499 1.4e-06 57.4 153 34.0
THA.LOC104816639 Tarenaya hassleriana HOM05D000492 ORTHO05D000499 1.4e-06 57.4 162 33.3
TAR633G2291 Trochodendron aralioides HOM05D000492 ORTHO05D000499 1.4e-06 57.4 150 32.7
VMungo1383G0043 Vigna mungo HOM05D000492 ORTHO05D000499 1.4e-06 57.4 164 33.5
Atru.chr8.1331 Acer truncatum HOM05D000492 ORTHO05D000499 1.8e-06 57.0 160 32.5
AT3G11820 Arabidopsis thaliana HOM05D000492 ORTHO05D000499 1.8e-06 57.0 155 32.9
BcaB04g18662 Brassica carinata HOM05D000492 ORTHO05D000499 1.8e-06 57.0 151 34.4
BcaC01g04084 Brassica carinata HOM05D000492 ORTHO05D000499 1.8e-06 57.0 151 34.4
A03p37300 Brassica napus HOM05D000492 ORTHO05D000499 1.8e-06 57.0 151 34.4
C03p45160 Brassica napus HOM05D000492 ORTHO05D000499 1.8e-06 57.0 151 34.4
BolC3t16780H Brassica oleracea HOM05D000492 ORTHO05D000499 1.8e-06 57.0 151 34.4
BraA03t12890Z Brassica rapa HOM05D000492 ORTHO05D000499 1.8e-06 57.0 151 34.4
FAN14G0852 Fragaria x ananassa HOM05D000492 ORTHO05D000499 1.8e-06 57.0 162 32.7
Prupe.7G093500 Prunus persica HOM05D000492 ORTHO05D000499 1.8e-06 57.0 159 31.4
Sabra16G0069600 Salix brachista HOM05D000492 ORTHO05D000499 1.8e-06 57.0 158 32.9
THA.LOC104824430 Tarenaya hassleriana HOM05D000492 ORTHO05D000499 1.8e-06 57.0 150 32.7
Cfa020049 Carpinus fangiana HOM05D000492 ORTHO05D000499 2.3e-06 56.6 161 31.1
TAR169G0002 Trochodendron aralioides HOM05D000492 ORTHO05D000499 2.3e-06 56.6 150 34.0
Aa31LG10G7460 Aethionema arabicum HOM05D000492 ORTHO05D000499 3.0e-06 56.2 159 30.8
Aa31LG3G5310 Aethionema arabicum HOM05D000492 ORTHO05D000499 3.0e-06 56.2 157 31.2
MSTRG.19301 Avicennia marina HOM05D000492 ORTHO05D000499 3.0e-06 56.2 160 30.6
Glyma.02G195300 Glycine max HOM05D000492 ORTHO05D000499 3.0e-06 56.2 161 32.3
Medtr1g056550 Medicago truncatula HOM05D000492 ORTHO05D000499 3.0e-06 56.2 159 32.7
Nn2g14343 Nelumbo nucifera HOM05D000492 ORTHO05D000499 3.0e-06 56.2 164 32.9
Phvul.001G196400 Phaseolus vulgaris HOM05D000492 ORTHO05D000499 3.0e-06 56.2 164 33.5
PGR142G2561 Punica granatum HOM05D000492 ORTHO05D000499 3.0e-06 56.2 160 32.5
TWI74G0073 Tripterygium wilfordii HOM05D000492 ORTHO05D000499 3.0e-06 56.2 160 33.8
TAR169G0001 Trochodendron aralioides HOM05D000492 ORTHO05D000499 3.0e-06 56.2 150 34.0
TAR623G0515 Trochodendron aralioides HOM05D000492 ORTHO05D000499 3.0e-06 56.2 150 34.0
TAR623G1360 Trochodendron aralioides HOM05D000492 ORTHO05D000499 3.0e-06 56.2 150 34.0
HanXRQChr11g0347151 Helianthus annuus HOM05D000492 ORTHO05D000499 3.9e-06 55.8 159 32.1
Lsat_1_v5_gn_6_33900 Lactuca sativa HOM05D000492 ORTHO05D000499 3.9e-06 55.8 155 33.5
Os02g0209900 Oryza sativa ssp. japonica HOM05D000492 ORTHO05D000499 3.9e-06 55.8 151 33.1
ATR0824G220 Amborella trichopoda HOM05D000492 ORTHO05D000499 5.1e-06 55.5 166 31.3
Haze_20152 Corylus avellana HOM05D000492 ORTHO05D000499 5.1e-06 55.5 161 31.7
Dinv31775 Davidia involucrata HOM05D000492 ORTHO05D000499 5.1e-06 55.5 160 33.1
ECA233G4199 Erigeron canadensis HOM05D000492 ORTHO05D000499 5.1e-06 55.5 170 31.8
FvH4_6g20460 Fragaria vesca HOM05D000492 ORTHO05D000499 5.1e-06 55.5 162 32.1
Glyma.19G200500 Glycine max HOM05D000492 ORTHO05D000499 5.1e-06 55.5 154 32.5
Lalb_Chr25g0287951 Lupinus albus HOM05D000492 ORTHO05D000499 5.1e-06 55.5 150 32.7
Hund10859 Selenicereus undatus HOM05D000492 ORTHO05D000499 5.1e-06 55.5 160 33.8
TPR.G2788 Trifolium pratense HOM05D000492 ORTHO05D000499 5.1e-06 55.5 159 32.1
BcaB02g08572 Brassica carinata HOM05D000492 ORTHO05D000499 6.7e-06 55.1 159 30.2
DCAR_009730 Daucus carota HOM05D000492 ORTHO05D000499 6.7e-06 55.1 170 29.4
Hma1.2p1_0064F.1_g034590 Hydrangea macrophylla HOM05D000492 ORTHO05D000499 6.7e-06 55.1 154 31.2
Lsat_1_v5_gn_1_58340 Lactuca sativa HOM05D000492 ORTHO05D000499 6.7e-06 55.1 157 35.0
Sc10g0001960 Simmondsia chinensis HOM05D000492 ORTHO05D000499 6.7e-06 55.1 144 28.5
MSTRG.14184 Avicennia marina HOM05D000492 ORTHO05D000499 8.8e-06 54.7 162 31.5
Cfa020048 Carpinus fangiana HOM05D000492 ORTHO05D000499 8.8e-06 54.7 156 33.3
MD12G1041800 Malus domestica HOM05D000492 ORTHO05D000499 8.8e-06 54.7 155 31.0
Psat6g108120 Pisum sativum HOM05D000492 ORTHO05D000499 8.8e-06 54.7 159 31.4


User provided reference genes

Program Settings