Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.4e-81 305.4 155 100.0
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 1.7e-47 193.0 149 58.4
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 4.3e-46 188.3 141 59.6
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 5.6e-46 188.0 142 61.3
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 7.3e-46 187.6 141 60.3
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 9.6e-46 187.2 140 60.7
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 1.6e-45 186.4 140 60.0
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 2.8e-45 185.7 149 56.4
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 2.8e-45 185.7 141 61.0
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 6.2e-45 184.5 141 59.6
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 6.2e-45 184.5 141 61.7
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 6.2e-45 184.5 149 57.0
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 8.1e-45 184.1 141 61.7
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.1e-44 183.7 141 59.6
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 1.8e-44 183.0 141 61.0
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 4.0e-44 181.8 141 57.4
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 6.9e-44 181.0 142 57.0
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 6.9e-44 181.0 142 57.0
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 6.9e-44 181.0 141 60.3
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 6.9e-44 181.0 141 59.6
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 9.0e-44 180.6 147 57.1
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.2e-43 180.3 142 57.0
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 1.5e-43 179.9 150 55.3
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 2.0e-43 179.5 140 60.7
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 2.0e-43 179.5 141 58.9
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 2.6e-43 179.1 149 55.7
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 2.6e-43 179.1 143 58.7
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 3.4e-43 178.7 141 57.4
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 4.4e-43 178.3 141 58.9
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 4.4e-43 178.3 141 58.9
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.4e-43 178.3 141 56.7
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.4e-43 178.3 141 56.7
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 5.8e-43 177.9 141 56.7
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 7.6e-43 177.6 146 56.8
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 7.6e-43 177.6 144 56.9
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 7.6e-43 177.6 140 57.1
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 9.9e-43 177.2 141 56.7
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 9.9e-43 177.2 150 54.0
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 9.9e-43 177.2 152 53.3
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 9.9e-43 177.2 145 55.2
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 9.9e-43 177.2 143 55.2
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 9.9e-43 177.2 140 56.4
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 9.9e-43 177.2 142 57.0
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.3e-42 176.8 146 56.2
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 1.3e-42 176.8 142 56.3
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 1.7e-42 176.4 172 51.2
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 2.2e-42 176.0 133 57.9
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 2.9e-42 175.6 142 55.6
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 3.8e-42 175.3 154 53.9
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.9e-41 172.9 141 56.7
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.9e-41 172.9 144 56.2
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 1.9e-41 172.9 141 58.2
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 2.4e-41 172.6 142 57.0
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 2.4e-41 172.6 133 60.2
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 3.2e-41 172.2 133 57.9
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 3.2e-41 172.2 145 55.2
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 3.2e-41 172.2 138 58.0
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 3.2e-41 172.2 141 56.7
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 1.2e-40 170.2 143 56.6
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 1.6e-40 169.9 150 54.7
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 6.0e-40 167.9 144 54.9
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 6.0e-40 167.9 133 57.1
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 7.8e-40 167.5 141 55.3
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 7.8e-40 167.5 141 56.0
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.0e-39 167.2 141 55.3
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 1.3e-39 166.8 141 54.6
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 2.3e-39 166.0 148 52.7
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 3.9e-39 165.2 148 54.1
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 3.9e-39 165.2 141 52.5
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 5.1e-39 164.9 133 55.6
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 5.1e-39 164.9 144 55.6
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 6.6e-39 164.5 141 54.6
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 8.7e-39 164.1 145 53.1
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 8.7e-39 164.1 137 55.5
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 8.7e-39 164.1 137 55.5
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 8.7e-39 164.1 133 57.1
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 1.5e-38 163.3 133 54.9
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.5e-38 163.3 142 53.5
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 1.9e-38 162.9 137 54.7
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 5.6e-38 161.4 141 53.9
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 5.6e-38 161.4 141 53.9
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 9.6e-38 160.6 141 53.2
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 1.6e-37 159.8 137 52.6
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 2.1e-37 159.5 141 53.2
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 2.8e-37 159.1 133 55.6
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 2.8e-37 159.1 139 54.0
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 8.1e-37 157.5 144 52.1
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 1.1e-36 157.1 141 52.5
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 2.4e-36 156.0 140 52.1
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 2.6e-35 152.5 149 53.0
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 3.4e-35 152.1 150 48.7
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 4.5e-35 151.8 137 50.4
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 9.9e-35 150.6 130 56.2
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.4e-33 146.7 140 51.4
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 3.5e-32 142.1 118 53.4
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 5.1e-31 138.3 141 48.9
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 1.5e-30 136.7 141 51.1
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 9.6e-30 134.0 95 62.1
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 2.6e-27 125.9 140 47.1
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.9e-25 119.8 141 44.7
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 4.6e-24 115.2 105 53.3
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 1.1e-22 110.5 142 41.5
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 3.3e-22 109.0 80 58.8
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 1.3e-18 97.1 121 38.8
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 3.8e-18 95.5 148 39.2
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 3.2e-17 92.4 124 37.9
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 2.7e-16 89.4 58 67.2
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 7.9e-16 87.8 140 38.6
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 8.7e-15 84.3 60 66.7
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.3e-13 80.5 113 37.2
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 8.2e-13 77.8 146 34.2
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 4.5e-11 72.0 110 38.2
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 5.0e-10 68.6 142 31.7
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 1.1e-09 67.4 142 31.0
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.4e-07 60.5 75 44.0


User provided reference genes

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