Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 4.0e-75 284.6 140 100.0
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 3.3e-29 132.1 122 55.7
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 2.4e-27 125.9 93 67.7
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.2e-26 123.6 115 55.7
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 9.9e-26 120.6 93 65.6
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 2.9e-25 119.0 115 54.8
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 4.9e-25 118.2 93 64.5
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 6.4e-25 117.9 135 47.4
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 6.4e-25 117.9 132 48.5
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 6.4e-25 117.9 103 60.2
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 8.4e-25 117.5 117 56.4
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 1.1e-24 117.1 101 60.4
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 1.1e-24 117.1 135 48.1
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 1.4e-24 116.7 93 62.4
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 1.4e-24 116.7 99 59.6
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 1.9e-24 116.3 99 61.6
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 2.4e-24 115.9 99 58.6
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 2.4e-24 115.9 101 60.4
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 4.2e-24 115.2 103 58.3
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 4.2e-24 115.2 101 56.4
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 4.2e-24 115.2 101 60.4
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 5.5e-24 114.8 117 53.0
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 5.5e-24 114.8 86 66.3
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 7.1e-24 114.4 120 52.5
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 7.1e-24 114.4 91 62.6
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 1.2e-23 113.6 99 59.6
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 1.6e-23 113.2 136 48.5
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 1.6e-23 113.2 135 48.1
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 1.6e-23 113.2 76 72.4
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.6e-23 113.2 96 57.3
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 1.6e-23 113.2 78 71.8
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 2.1e-23 112.8 93 61.3
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 2.1e-23 112.8 120 52.5
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.1e-23 112.8 86 62.8
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 4.6e-23 111.7 104 55.8
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 4.6e-23 111.7 101 59.4
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 4.6e-23 111.7 135 46.7
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 6.0e-23 111.3 84 66.7
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 6.0e-23 111.3 102 57.8
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 7.9e-23 110.9 117 52.1
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 7.9e-23 110.9 74 73.0
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.3e-22 110.2 86 62.8
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.8e-22 109.8 74 73.0
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.8e-22 109.8 74 71.6
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.8e-22 109.8 101 57.4
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 2.3e-22 109.4 76 71.1
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 3.0e-22 109.0 100 56.0
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 3.9e-22 108.6 89 58.4
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 5.1e-22 108.2 102 57.8
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 6.7e-22 107.8 72 72.2
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 6.7e-22 107.8 101 58.4
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.1e-21 107.1 88 60.2
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 1.5e-21 106.7 70 74.3
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.5e-21 106.7 134 41.8
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 2.5e-21 105.9 85 65.9
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 3.3e-21 105.5 101 54.5
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 4.3e-21 105.1 115 49.6
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 5.6e-21 104.8 86 64.0
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 7.4e-21 104.4 72 73.6
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 7.4e-21 104.4 113 52.2
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 7.4e-21 104.4 101 57.4
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 2.1e-20 102.8 108 53.7
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 3.7e-20 102.1 81 58.0
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 4.8e-20 101.7 102 52.9
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 4.8e-20 101.7 95 60.0
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 8.1e-20 100.9 88 55.7
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 1.4e-19 100.1 74 64.9
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.8e-19 99.8 93 58.1
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 2.4e-19 99.4 92 54.3
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 3.1e-19 99.0 81 56.8
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 3.1e-19 99.0 80 57.5
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 4.0e-19 98.6 117 52.1
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 5.3e-19 98.2 80 57.5
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 5.3e-19 98.2 101 55.4
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 9.0e-19 97.4 129 44.2
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.5e-18 96.7 71 63.4
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.5e-18 96.7 71 63.4
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.6e-18 95.9 86 60.5
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.6e-18 95.9 74 66.2
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 3.4e-18 95.5 129 43.4
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 3.4e-18 95.5 93 54.8
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 3.4e-18 95.5 93 54.8
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 4.5e-18 95.1 72 61.1
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 4.5e-18 95.1 78 65.4
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 5.8e-18 94.7 100 49.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 1.0e-17 94.0 75 61.3
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 1.3e-17 93.6 71 60.6
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 1.3e-17 93.6 73 60.3
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 1.3e-17 93.6 90 60.0
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 1.3e-17 93.6 74 63.5
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 1.7e-17 93.2 71 59.2
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 1.7e-17 93.2 74 62.2
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.2e-17 92.8 60 76.7
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 2.2e-17 92.8 95 52.6
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 2.9e-17 92.4 71 60.6
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 3.8e-17 92.0 71 59.2
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 8.4e-17 90.9 100 47.0
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 3.2e-16 89.0 79 59.5
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 9.3e-16 87.4 80 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.8e-14 83.2 72 55.6
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 1.1e-13 80.5 75 53.3
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.5e-13 80.1 95 46.3
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 3.3e-13 79.0 71 59.2
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 1.3e-12 77.0 70 51.4
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 6.3e-12 74.7 88 44.3
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 3.1e-11 72.4 48 66.7
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 5.3e-11 71.6 57 54.4
Zm00001eb184420 Zea mays HOM05D007179 ORTHO05D009124 3.0e-06 55.8 71 47.9


User provided reference genes

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