Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018497 Vanilla planifolia HOM05D005232 ORTHO05D006389 0.0e+00 1289.6 676 100.0
Nn1g01560 Nelumbo nucifera HOM05D005232 ORTHO05D006389 2.8e-73 280.8 696 36.2
TAR375G0877 Trochodendron aralioides HOM05D005232 ORTHO05D006389 1.2e-71 275.4 698 35.8
CDE11G0704 Ceratophyllum demersum HOM05D005232 ORTHO05D006389 1.7e-62 245.0 671 33.7
Aqoxy7G00280 Aquilegia oxysepala HOM05D005232 ORTHO05D006389 6.0e-52 209.9 702 31.6
TAR629G2045 Trochodendron aralioides HOM05D005232 ORTHO05D006389 3.9e-51 207.2 694 32.1
PSO170G2956 Papaver somniferum HOM05D005232 ORTHO05D006389 3.3e-50 204.1 644 34.6
ClCG07G016960 Citrullus lanatus HOM05D005232 ORTHO05D006389 1.3e-41 175.6 699 30.9
Cfa016269 Carpinus fangiana HOM05D005232 ORTHO05D006389 8.1e-41 172.9 684 32.0
AUR62021146 Chenopodium quinoa HOM05D005232 ORTHO05D006389 2.6e-39 167.9 680 30.9
Haze_00026 Corylus avellana HOM05D005232 ORTHO05D006389 3.4e-39 167.5 696 31.3
EL10Ac3g05588 Beta vulgaris HOM05D005232 ORTHO05D006389 1.0e-38 166.0 673 30.5
MELO3C017648.2 Cucumis melo HOM05D005232 ORTHO05D006389 4.9e-38 163.7 702 30.3
CiPaw.05G164300 Carya illinoinensis HOM05D005232 ORTHO05D006389 8.4e-38 162.9 688 31.7
CsaV3_4G004180 Cucumis sativus L. HOM05D005232 ORTHO05D006389 1.1e-37 162.5 702 30.1
Thecc.08G165200 Theobroma cacao HOM05D005232 ORTHO05D006389 2.5e-37 161.4 683 31.8
Ciclev10004180m.g Citrus clementina HOM05D005232 ORTHO05D006389 7.1e-37 159.8 676 32.2
Sed0005714 Sechium edule HOM05D005232 ORTHO05D006389 4.6e-36 157.1 695 29.9
RcHm_v2.0_Chr2g0116381 Rosa chinensis HOM05D005232 ORTHO05D006389 6.0e-36 156.8 684 31.3
QL09p013403 Quercus lobata HOM05D005232 ORTHO05D006389 7.9e-36 156.4 681 31.7
Manes.14G024000 Manihot esculenta HOM05D005232 ORTHO05D006389 1.0e-35 156.0 673 32.1
PSO528G0151 Papaver somniferum HOM05D005232 ORTHO05D006389 1.8e-35 155.2 635 30.4
Dinv13548 Davidia involucrata HOM05D005232 ORTHO05D006389 1.1e-34 152.5 686 31.3
Potri.015G147200 Populus trichocarpa HOM05D005232 ORTHO05D006389 1.9e-34 151.8 686 30.0
Atru.chr1.399 Acer truncatum HOM05D005232 ORTHO05D006389 3.7e-33 147.5 701 31.8
MD07G1276200 Malus domestica HOM05D005232 ORTHO05D006389 3.7e-33 147.5 554 32.5
Prupe.2G298500 Prunus persica HOM05D005232 ORTHO05D006389 3.7e-33 147.5 682 31.1
AUR62031391 Chenopodium quinoa HOM05D005232 ORTHO05D006389 1.5e-31 142.1 612 29.9
TWI14G0968 Tripterygium wilfordii HOM05D005232 ORTHO05D006389 1.1e-29 136.0 684 30.3
Actinidia22445 Actinidia chinensis HOM05D005232 ORTHO05D006389 1.9e-29 135.2 678 30.2
Gorai.001G083900 Gossypium raimondii HOM05D005232 ORTHO05D006389 5.5e-29 133.7 618 29.8
Os10g0447600 Oryza sativa ssp. japonica HOM05D005232 ORTHO05D006389 5.5e-29 133.7 606 29.7
Gohir.A07G074600 Gossypium hirsutum HOM05D005232 ORTHO05D006389 2.7e-28 131.3 619 29.9
SalBow7G4258 Salvia bowleyana HOM05D005232 ORTHO05D006389 7.9e-28 129.8 665 29.2
Lj8A722G14 Lonicera japonica HOM05D005232 ORTHO05D006389 1.8e-27 128.6 639 30.7
FAN26G0882 Fragaria x ananassa HOM05D005232 ORTHO05D006389 5.1e-27 127.1 627 30.3
Nitab4.5_0007148g0020 Nicotiana tabacum HOM05D005232 ORTHO05D006389 5.1e-27 127.1 670 28.5
Nitab4.5_0013274g0010 Nicotiana tabacum HOM05D005232 ORTHO05D006389 1.1e-26 125.9 669 28.4
FAN28G2294 Fragaria x ananassa HOM05D005232 ORTHO05D006389 3.3e-26 124.4 605 30.7
FvH4_1g22240 Fragaria vesca HOM05D005232 ORTHO05D006389 5.7e-26 123.6 677 29.5
Dinv28407 Davidia involucrata HOM05D005232 ORTHO05D006389 7.4e-26 123.2 639 31.0
Lalb_Chr02g0141181 Lupinus albus HOM05D005232 ORTHO05D006389 1.3e-25 122.5 680 28.7
FAN19G1688 Fragaria x ananassa HOM05D005232 ORTHO05D006389 1.6e-25 122.1 677 29.2
MSTRG.8138 Avicennia marina HOM05D005232 ORTHO05D006389 2.2e-25 121.7 637 30.0
FAN23G0292 Fragaria x ananassa HOM05D005232 ORTHO05D006389 3.7e-25 120.9 676 28.8
SEGI_26780 Sequoiadendron giganteum HOM05D005232 ORTHO05D006389 1.8e-24 118.6 737 26.1
Sabra15G0156100 Salix brachista HOM05D005232 ORTHO05D006389 2.4e-24 118.2 615 28.3
Hund04775 Selenicereus undatus HOM05D005232 ORTHO05D006389 5.3e-24 117.1 680 30.1
Gohir.D07G079300 Gossypium hirsutum HOM05D005232 ORTHO05D006389 1.2e-23 115.9 617 28.7
CSS0011841 Camellia sinensis var. sinensis HOM05D005232 ORTHO05D006389 3.2e-21 107.8 620 29.2
CDE05G3165 Ceratophyllum demersum HOM05D005232 ORTHO05D006389 1.2e-20 105.9 212 40.6
TWI39G1086 Tripterygium wilfordii HOM05D005232 ORTHO05D006389 2.1e-20 105.1 657 27.5
Glyma.10G232300 Glycine max HOM05D005232 ORTHO05D006389 4.6e-20 104.0 522 32.0
Lj5g0027810 Lotus japonicus HOM05D005232 ORTHO05D006389 7.9e-20 103.2 497 31.4
arahy.Tifrunner.gnm1.ann1.JBBQ4L Arachis hypogaea HOM05D005232 ORTHO05D006389 1.0e-19 102.8 619 29.2
Potri.012G144400 Populus trichocarpa HOM05D005232 ORTHO05D006389 1.0e-19 102.8 564 28.0
CSS0049575 Camellia sinensis var. sinensis HOM05D005232 ORTHO05D006389 2.3e-19 101.7 300 38.3
Duzib170G0925 Durio zibethinus HOM05D005232 ORTHO05D006389 2.0e-18 98.6 626 29.4
VMungo0720G1404 Vigna mungo HOM05D005232 ORTHO05D006389 2.0e-18 98.6 659 28.5
CDE05G2228 Ceratophyllum demersum HOM05D005232 ORTHO05D006389 7.4e-18 96.7 354 29.4
Ca_10736_v3 Cicer arietinum L. HOM05D005232 ORTHO05D006389 7.4e-18 96.7 565 28.8
Glyma.20G161800 Glycine max HOM05D005232 ORTHO05D006389 9.7e-18 96.3 646 29.4
Phvul.007G073300 Phaseolus vulgaris HOM05D005232 ORTHO05D006389 4.8e-17 94.0 650 29.5
Ah.07g201890 Amaranthus hybridus HOM05D005232 ORTHO05D006389 8.2e-17 93.2 684 27.5
Hund11728 Selenicereus undatus HOM05D005232 ORTHO05D006389 1.4e-16 92.4 675 28.1
GSVIVG01028893001 Vitis vinifera HOM05D005232 ORTHO05D006389 1.4e-16 92.4 547 28.0
TPR.G22241 Trifolium pratense HOM05D005232 ORTHO05D006389 2.4e-16 91.7 572 28.7
Peaxi162Scf00858g00214 Petunia axillaris HOM05D005232 ORTHO05D006389 3.1e-16 91.3 635 26.6
Sabra12G0108400 Salix brachista HOM05D005232 ORTHO05D006389 9.1e-16 89.7 557 28.9
Sopen05g034610 Solanum pennellii HOM05D005232 ORTHO05D006389 1.2e-15 89.4 662 25.8
MSTRG.380 Avicennia marina HOM05D005232 ORTHO05D006389 3.4e-15 87.8 647 27.4
SGA_v2.0_scaffold51G18697 Striga asiatica HOM05D005232 ORTHO05D006389 4.5e-15 87.4 656 27.1
Zm00001eb003840 Zea mays HOM05D005232 ORTHO05D006389 2.9e-14 84.7 387 27.1
Migut.F01728 Erythranthe guttata HOM05D005232 ORTHO05D006389 3.8e-14 84.3 622 28.8
Os01g0267100 Oryza sativa ssp. japonica HOM05D005232 ORTHO05D006389 5.0e-14 84.0 307 31.9
Solyc05g056220.3 Solanum lycopersicum HOM05D005232 ORTHO05D006389 8.5e-14 83.2 664 26.7
ATR0618G373 Amborella trichopoda HOM05D005232 ORTHO05D006389 2.5e-13 81.6 735 24.9
Psat6g193720 Pisum sativum HOM05D005232 ORTHO05D006389 9.4e-13 79.7 631 27.3
PGSC0003DMG401023336 Solanum tuberosum HOM05D005232 ORTHO05D006389 9.4e-13 79.7 663 25.8
Eucgr.C03422 Eucalyptus grandis HOM05D005232 ORTHO05D006389 2.7e-12 78.2 660 27.0
PGSC0003DMG402023336 Solanum tuberosum HOM05D005232 ORTHO05D006389 2.7e-12 78.2 663 25.2
TPR.G26976 Trifolium pratense HOM05D005232 ORTHO05D006389 2.7e-12 78.2 568 27.6
Solyc05g056210.4 Solanum lycopersicum HOM05D005232 ORTHO05D006389 1.8e-11 75.5 663 25.3
Oeu041197.1 Olea europaea HOM05D005232 ORTHO05D006389 2.3e-11 75.1 649 25.3
Medtr1g100210 Medicago truncatula HOM05D005232 ORTHO05D006389 3.0e-11 74.7 481 29.1
Sc20g0006810 Simmondsia chinensis HOM05D005232 ORTHO05D006389 5.2e-11 73.9 635 27.9
THA.LOC104811969 Tarenaya hassleriana HOM05D005232 ORTHO05D006389 8.8e-11 73.2 622 25.4
Os03g0147700 Oryza sativa ssp. japonica HOM05D005232 ORTHO05D006389 3.3e-10 71.2 403 28.3
Sopen05g034600 Solanum pennellii HOM05D005232 ORTHO05D006389 9.7e-10 69.7 663 24.9
arahy.Tifrunner.gnm1.ann1.7ZJB2L Arachis hypogaea HOM05D005232 ORTHO05D006389 2.2e-09 68.6 528 28.2
CAN.G694.95 Capsicum annuum HOM05D005232 ORTHO05D006389 6.3e-09 67.0 669 25.9
unitig_736.g22332 Utricularia gibba HOM05D005232 ORTHO05D006389 2.4e-08 65.1 430 27.7
PGR102G0407 Punica granatum HOM05D005232 ORTHO05D006389 7.0e-08 63.5 552 25.7
CAN.G694.94 Capsicum annuum HOM05D005232 ORTHO05D006389 2.0e-07 62.0 663 24.7


User provided reference genes

Program Settings