Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018411 Vanilla planifolia HOM05D001643 ORTHO05D001580 2.0e-30 135.2 72 100.0
HPP92_018408 Vanilla planifolia HOM05D001643 ORTHO05D001580 2.0e-14 82.0 70 71.4
Os03g0810600 Oryza sativa ssp. japonica HOM05D001643 ORTHO05D001580 1.5e-09 65.9 71 50.7
Zm00001eb212300 Zea mays HOM05D001643 ORTHO05D001580 9.7e-09 63.2 59 54.2
CSS0022196 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 2.2e-08 62.0 48 62.5
MBI19_g27172_MAGBIO Magnolia biondii HOM05D001643 ORTHO05D001580 2.8e-08 61.6 41 73.2
DCAR_002737 Daucus carota HOM05D001643 ORTHO05D001580 3.7e-08 61.2 69 47.8
Nn4g26241 Nelumbo nucifera HOM05D001643 ORTHO05D001580 3.7e-08 61.2 48 64.6
Zm00001eb062070 Zea mays HOM05D001643 ORTHO05D001580 3.7e-08 61.2 69 50.7
Carub.0005s2982 Capsella rubella HOM05D001643 ORTHO05D001580 4.8e-08 60.8 76 46.1
Potri.005G033700 Populus trichocarpa HOM05D001643 ORTHO05D001580 4.8e-08 60.8 48 62.5
ATR0693G328 Amborella trichopoda HOM05D001643 ORTHO05D001580 6.3e-08 60.5 68 50.0
RcHm_v2.0_Chr6g0291101 Rosa chinensis HOM05D001643 ORTHO05D001580 6.3e-08 60.5 49 59.2
THA.LOC104810659 Tarenaya hassleriana HOM05D001643 ORTHO05D001580 6.3e-08 60.5 65 49.2
THA.LOC104823048 Tarenaya hassleriana HOM05D001643 ORTHO05D001580 6.3e-08 60.5 65 49.2
ClCG02G015860 Citrullus lanatus HOM05D001643 ORTHO05D001580 8.2e-08 60.1 67 49.3
Aa31LG10G16990 Aethionema arabicum HOM05D001643 ORTHO05D001580 1.1e-07 59.7 73 46.6
arahy.Tifrunner.gnm1.ann1.58XGVW Arachis hypogaea HOM05D001643 ORTHO05D001580 1.1e-07 59.7 39 79.5
BcaC02g10351 Brassica carinata HOM05D001643 ORTHO05D001580 1.1e-07 59.7 73 45.2
C04p30070 Brassica napus HOM05D001643 ORTHO05D001580 1.1e-07 59.7 73 45.2
BolC4t24539H Brassica oleracea HOM05D001643 ORTHO05D001580 1.1e-07 59.7 73 45.2
Nn1g09237 Nelumbo nucifera HOM05D001643 ORTHO05D001580 1.1e-07 59.7 48 66.7
MELO3C015839.2 Cucumis melo HOM05D001643 ORTHO05D001580 1.4e-07 59.3 41 70.7
Manes.08G121200 Manihot esculenta HOM05D001643 ORTHO05D001580 1.4e-07 59.3 48 62.5
Manes.09G166600 Manihot esculenta HOM05D001643 ORTHO05D001580 1.4e-07 59.3 49 63.3
AT3G63150 Arabidopsis thaliana HOM05D001643 ORTHO05D001580 1.8e-07 58.9 78 43.6
Dinv32939 Davidia involucrata HOM05D001643 ORTHO05D001580 1.8e-07 58.9 48 60.4
Eucgr.B01990 Eucalyptus grandis HOM05D001643 ORTHO05D001580 1.8e-07 58.9 43 74.4
Thhalv10005831m.g Eutrema salsugineum HOM05D001643 ORTHO05D001580 1.8e-07 58.9 73 45.2
Lalb_Chr21g0310701 Lupinus albus HOM05D001643 ORTHO05D001580 1.8e-07 58.9 40 77.5
PGR083G0958 Punica granatum HOM05D001643 ORTHO05D001580 1.8e-07 58.9 45 68.9
CDE05G0595 Ceratophyllum demersum HOM05D001643 ORTHO05D001580 2.4e-07 58.5 71 47.9
ClCG09G007010 Citrullus lanatus HOM05D001643 ORTHO05D001580 2.4e-07 58.5 41 70.7
CsaV3_7G028150 Cucumis sativus L. HOM05D001643 ORTHO05D001580 2.4e-07 58.5 41 70.7
Dinv23945 Davidia involucrata HOM05D001643 ORTHO05D001580 2.4e-07 58.5 48 62.5
Prupe.8G241500 Prunus persica HOM05D001643 ORTHO05D001580 2.4e-07 58.5 49 59.2
AL5G45990 Arabidopsis lyrata HOM05D001643 ORTHO05D001580 3.1e-07 58.2 78 42.3
A04p00250 Brassica napus HOM05D001643 ORTHO05D001580 3.1e-07 58.2 73 43.8
BraA04t15744Z Brassica rapa HOM05D001643 ORTHO05D001580 3.1e-07 58.2 73 43.8
CARHR173470 Cardamine hirsuta HOM05D001643 ORTHO05D001580 3.1e-07 58.2 75 45.3
Cfa006134 Carpinus fangiana HOM05D001643 ORTHO05D001580 3.1e-07 58.2 67 49.3
Gohir.D08G076200 Gossypium hirsutum HOM05D001643 ORTHO05D001580 3.1e-07 58.2 46 60.9
Gorai.004G080500 Gossypium raimondii HOM05D001643 ORTHO05D001580 3.1e-07 58.2 46 60.9
Lsat_1_v5_gn_2_67460 Lactuca sativa HOM05D001643 ORTHO05D001580 3.1e-07 58.2 49 63.3
Potri.005G209000 Populus trichocarpa HOM05D001643 ORTHO05D001580 3.1e-07 58.2 45 66.7
Sabra05G0035800 Salix brachista HOM05D001643 ORTHO05D001580 3.1e-07 58.2 48 60.4
arahy.Tifrunner.gnm1.ann1.MX1CYR Arachis hypogaea HOM05D001643 ORTHO05D001580 4.1e-07 57.8 39 76.9
Haze_04716 Corylus avellana HOM05D001643 ORTHO05D001580 4.1e-07 57.8 65 47.7
Glyma.10G154700 Glycine max HOM05D001643 ORTHO05D001580 4.1e-07 57.8 39 76.9
QL12p021945 Quercus lobata HOM05D001643 ORTHO05D001580 4.1e-07 57.8 44 68.2
Sed0026911 Sechium edule HOM05D001643 ORTHO05D001580 4.1e-07 57.8 67 49.3
TWI36G1001 Tripterygium wilfordii HOM05D001643 ORTHO05D001580 4.1e-07 57.8 47 63.8
TWI56G1494 Tripterygium wilfordii HOM05D001643 ORTHO05D001580 4.1e-07 57.8 52 63.5
Ciclev10000541m.g Citrus clementina HOM05D001643 ORTHO05D001580 5.3e-07 57.4 48 58.3
Gohir.A08G067700 Gossypium hirsutum HOM05D001643 ORTHO05D001580 5.3e-07 57.4 46 60.9
PSO210G2302 Papaver somniferum HOM05D001643 ORTHO05D001580 5.3e-07 57.4 49 61.2
PSO832G1451 Papaver somniferum HOM05D001643 ORTHO05D001580 6.9e-07 57.0 44 61.4
Rhsim05G0141900 Rhododendron simsii HOM05D001643 ORTHO05D001580 6.9e-07 57.0 48 60.4
Sabra13G0025100 Salix brachista HOM05D001643 ORTHO05D001580 6.9e-07 57.0 48 58.3
Sc16g0008450 Simmondsia chinensis HOM05D001643 ORTHO05D001580 6.9e-07 57.0 43 62.8
Thecc.01G279900 Theobroma cacao HOM05D001643 ORTHO05D001580 6.9e-07 57.0 44 63.6
Atru.chr2.415 Acer truncatum HOM05D001643 ORTHO05D001580 9.1e-07 56.6 48 58.3
Cpa.g.sc48.43 Carica papaya HOM05D001643 ORTHO05D001580 9.1e-07 56.6 41 68.3
Cpa.g.sc52.32 Carica papaya HOM05D001643 ORTHO05D001580 9.1e-07 56.6 41 65.9
Hma1.2p1_0928F.1_g237840 Hydrangea macrophylla HOM05D001643 ORTHO05D001580 9.1e-07 56.6 47 57.4
Phvul.001G150700 Phaseolus vulgaris HOM05D001643 ORTHO05D001580 9.1e-07 56.6 47 63.8
Phvul.007G180300 Phaseolus vulgaris HOM05D001643 ORTHO05D001580 9.1e-07 56.6 39 74.4
Potri.013G023100 Populus trichocarpa HOM05D001643 ORTHO05D001580 9.1e-07 56.6 48 56.2
TAR365G0811 Trochodendron aralioides HOM05D001643 ORTHO05D001580 9.1e-07 56.6 48 58.3
GSVIVG01000044001 Vitis vinifera HOM05D001643 ORTHO05D001580 9.1e-07 56.6 48 62.5
CANSAT25G3103 Cannabis sativa HOM05D001643 ORTHO05D001580 1.2e-06 56.2 45 60.0
Duzib138G0894 Durio zibethinus HOM05D001643 ORTHO05D001580 1.2e-06 56.2 46 58.7
FAN20G2538 Fragaria x ananassa HOM05D001643 ORTHO05D001580 1.2e-06 56.2 41 68.3
Hma1.2p1_0617F.1_g190260 Hydrangea macrophylla HOM05D001643 ORTHO05D001580 1.2e-06 56.2 48 58.3
Lalb_Chr02g0148271 Lupinus albus HOM05D001643 ORTHO05D001580 1.2e-06 56.2 38 73.7
QL03p006918 Quercus lobata HOM05D001643 ORTHO05D001580 1.2e-06 56.2 39 71.8
Sabra05G0159100 Salix brachista HOM05D001643 ORTHO05D001580 1.2e-06 56.2 45 66.7
Ah.04g160240 Amaranthus hybridus HOM05D001643 ORTHO05D001580 1.5e-06 55.8 44 56.8
CiPaw.07G017200 Carya illinoinensis HOM05D001643 ORTHO05D001580 1.5e-06 55.8 48 60.4
FAN02G2906 Fragaria x ananassa HOM05D001643 ORTHO05D001580 1.5e-06 55.8 45 64.4
FAN05G3457 Fragaria x ananassa HOM05D001643 ORTHO05D001580 1.5e-06 55.8 45 64.4
FAN05G4420 Fragaria x ananassa HOM05D001643 ORTHO05D001580 1.5e-06 55.8 45 64.4
FAN09G2261 Fragaria x ananassa HOM05D001643 ORTHO05D001580 1.5e-06 55.8 45 64.4
FAN15G2458 Fragaria x ananassa HOM05D001643 ORTHO05D001580 1.5e-06 55.8 41 65.9
Hund07066 Selenicereus undatus HOM05D001643 ORTHO05D001580 1.5e-06 55.8 45 55.6
vmacro19626 Vaccinium macrocarpon HOM05D001643 ORTHO05D001580 1.5e-06 55.8 43 65.1
CSS0046377 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 2.0e-06 55.5 42 66.7
CiPaw.07G092200 Carya illinoinensis HOM05D001643 ORTHO05D001580 2.0e-06 55.5 43 65.1
Gohir.A08G210600 Gossypium hirsutum HOM05D001643 ORTHO05D001580 2.0e-06 55.5 49 59.2
Gohir.D08G227400 Gossypium hirsutum HOM05D001643 ORTHO05D001580 2.0e-06 55.5 49 59.2
Gorai.004G241600 Gossypium raimondii HOM05D001643 ORTHO05D001580 2.0e-06 55.5 49 59.2
HanXRQChr15g0472071 Helianthus annuus HOM05D001643 ORTHO05D001580 2.0e-06 55.5 48 60.4
Lalb_Chr06g0163021 Lupinus albus HOM05D001643 ORTHO05D001580 2.0e-06 55.5 44 65.9
MD03G1265800 Malus domestica HOM05D001643 ORTHO05D001580 2.0e-06 55.5 41 63.4
Nitab4.5_0000458g0010 Nicotiana tabacum HOM05D001643 ORTHO05D001580 2.0e-06 55.5 42 66.7
Nitab4.5_0010680g0010 Nicotiana tabacum HOM05D001643 ORTHO05D001580 2.0e-06 55.5 42 66.7
Peaxi162Scf01622g00011 Petunia axillaris HOM05D001643 ORTHO05D001580 2.0e-06 55.5 42 66.7
Hund21689 Selenicereus undatus HOM05D001643 ORTHO05D001580 2.0e-06 55.5 47 55.3
GSVIVG01011087001 Vitis vinifera HOM05D001643 ORTHO05D001580 2.0e-06 55.5 39 71.8
FvH4_6g05770 Fragaria vesca HOM05D001643 ORTHO05D001580 2.6e-06 55.1 45 64.4
FAN14G1623 Fragaria x ananassa HOM05D001643 ORTHO05D001580 2.6e-06 55.1 45 64.4
FAN14G3749 Fragaria x ananassa HOM05D001643 ORTHO05D001580 2.6e-06 55.1 45 64.4
Lj5g0001858 Lotus japonicus HOM05D001643 ORTHO05D001580 2.6e-06 55.1 39 71.8
VMungo0720G1701 Vigna mungo HOM05D001643 ORTHO05D001580 2.6e-06 55.1 39 71.8
AagrBONN_evm.TU.Sc2ySwM_228.4118 Anthoceros agrestis HOM05D001643 ORTHO05D001580 3.4e-06 54.7 47 61.7
Haze_14954 Corylus avellana HOM05D001643 ORTHO05D001580 3.4e-06 54.7 48 58.3
HanXRQChr14g0446261 Helianthus annuus HOM05D001643 ORTHO05D001580 3.4e-06 54.7 53 62.3
Lsat_1_v5_gn_5_188301 Lactuca sativa HOM05D001643 ORTHO05D001580 3.4e-06 54.7 63 52.4
MD04G1205700 Malus domestica HOM05D001643 ORTHO05D001580 3.4e-06 54.7 49 61.2
MD12G1219900 Malus domestica HOM05D001643 ORTHO05D001580 3.4e-06 54.7 49 61.2
TAR362G1169 Trochodendron aralioides HOM05D001643 ORTHO05D001580 3.4e-06 54.7 47 61.7
Atru.chr5.1432 Acer truncatum HOM05D001643 ORTHO05D001580 4.5e-06 54.3 47 57.4
EL10Ac4g09345 Beta vulgaris HOM05D001643 ORTHO05D001580 4.5e-06 54.3 44 56.8
CSS0037311 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 4.5e-06 54.3 43 62.8
Carub.0006s2502 Capsella rubella HOM05D001643 ORTHO05D001580 4.5e-06 54.3 48 60.4
Hma1.2p1_0257F.1_g103470 Hydrangea macrophylla HOM05D001643 ORTHO05D001580 4.5e-06 54.3 44 56.8
CANSAT54G0978 Cannabis sativa HOM05D001643 ORTHO05D001580 5.9e-06 53.9 41 65.9
CsaV3_2G005200 Cucumis sativus L. HOM05D001643 ORTHO05D001580 5.9e-06 53.9 67 46.3
Duzib177G1027 Durio zibethinus HOM05D001643 ORTHO05D001580 5.9e-06 53.9 49 57.1
Lj2C1174G2 Lonicera japonica HOM05D001643 ORTHO05D001580 5.9e-06 53.9 45 57.8
Psat3g064680 Pisum sativum HOM05D001643 ORTHO05D001580 5.9e-06 53.9 53 56.6
Sp5g00380 Schrenkiella parvula HOM05D001643 ORTHO05D001580 5.9e-06 53.9 73 41.1
PGSC0003DMG400012890 Solanum tuberosum HOM05D001643 ORTHO05D001580 5.9e-06 53.9 42 64.3
AUR62000835 Chenopodium quinoa HOM05D001643 ORTHO05D001580 7.7e-06 53.5 44 54.5
AUR62005139 Chenopodium quinoa HOM05D001643 ORTHO05D001580 7.7e-06 53.5 44 54.5
DCAR_028249 Daucus carota HOM05D001643 ORTHO05D001580 7.7e-06 53.5 43 60.5
ECA248G1719 Erigeron canadensis HOM05D001643 ORTHO05D001580 7.7e-06 53.5 63 50.8
Migut.D00293 Erythranthe guttata HOM05D001643 ORTHO05D001580 7.7e-06 53.5 64 50.0
FvH4_2g23630 Fragaria vesca HOM05D001643 ORTHO05D001580 7.7e-06 53.5 40 65.0
FAN24G1444 Fragaria x ananassa HOM05D001643 ORTHO05D001580 7.7e-06 53.5 40 65.0
FAN27G0431 Fragaria x ananassa HOM05D001643 ORTHO05D001580 7.7e-06 53.5 40 65.0
Manes.01G208001 Manihot esculenta HOM05D001643 ORTHO05D001580 7.7e-06 53.5 60 50.0
SEGI_15728 Sequoiadendron giganteum HOM05D001643 ORTHO05D001580 7.7e-06 53.5 43 55.8
SEGI_17444 Sequoiadendron giganteum HOM05D001643 ORTHO05D001580 7.7e-06 53.5 43 55.8
SEGI_20013 Sequoiadendron giganteum HOM05D001643 ORTHO05D001580 7.7e-06 53.5 43 55.8


User provided reference genes

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