Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018405 Vanilla planifolia HOM05D006530 ORTHO05D008283 0.0e+00 1181.0 613 100.0
Os08g0500800 Oryza sativa ssp. japonica HOM05D006530 ORTHO05D008283 6.5e-154 548.5 680 47.1
Zm00001eb034180 Zea mays HOM05D006530 ORTHO05D008283 1.8e-151 540.4 643 50.2
Duzib133G1057 Durio zibethinus HOM05D006530 ORTHO05D008283 5.0e-146 522.3 670 47.8
Hma1.2p1_0445F.1_g154110 Hydrangea macrophylla HOM05D006530 ORTHO05D008283 5.5e-145 518.8 639 48.5
Gorai.001G218200 Gossypium raimondii HOM05D006530 ORTHO05D008283 1.6e-144 517.3 676 46.9
Gohir.D07G195000 Gossypium hirsutum HOM05D006530 ORTHO05D008283 2.1e-144 516.9 676 46.7
Gohir.A07G188400 Gossypium hirsutum HOM05D006530 ORTHO05D008283 2.7e-144 516.5 672 46.4
COL.COLO4_32787 Corchorus olitorius HOM05D006530 ORTHO05D008283 2.3e-143 513.5 668 46.4
Cfa014298 Carpinus fangiana HOM05D006530 ORTHO05D008283 1.5e-142 510.8 650 48.8
Haze_12746 Corylus avellana HOM05D006530 ORTHO05D008283 1.3e-141 507.7 654 47.4
Rhsim06G0169800 Rhododendron simsii HOM05D006530 ORTHO05D008283 1.3e-141 507.7 648 47.8
Aqoxy1G02869 Aquilegia oxysepala HOM05D006530 ORTHO05D008283 1.4e-140 504.2 676 46.6
Thecc.01G184900 Theobroma cacao HOM05D006530 ORTHO05D008283 1.5e-139 500.7 670 46.1
PSO541G4152 Papaver somniferum HOM05D006530 ORTHO05D008283 2.6e-139 500.0 667 47.2
MD09G1117000 Malus domestica HOM05D006530 ORTHO05D008283 1.4e-137 494.2 683 45.5
FvH4_6g41820 Fragaria vesca HOM05D006530 ORTHO05D008283 1.9e-137 493.8 668 46.0
TAR624G0329 Trochodendron aralioides HOM05D006530 ORTHO05D008283 2.1e-136 490.3 717 44.5
Nn1g03345 Nelumbo nucifera HOM05D006530 ORTHO05D008283 3.9e-135 486.1 731 44.7
RcHm_v2.0_Chr2g0157621 Rosa chinensis HOM05D006530 ORTHO05D008283 8.8e-135 485.0 665 45.7
Ciclev10014523m.g Citrus clementina HOM05D006530 ORTHO05D008283 1.1e-134 484.6 672 44.8
CSS0049970 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 2.6e-134 483.4 687 45.1
CSS0002282 Camellia sinensis var. sinensis HOM05D006530 ORTHO05D008283 9.7e-134 481.5 678 45.0
Nitab4.5_0000622g0140 Nicotiana tabacum HOM05D006530 ORTHO05D008283 9.7e-134 481.5 656 46.3
Cpa.g.sc132.47 Carica papaya HOM05D006530 ORTHO05D008283 1.7e-133 480.7 603 48.4
Prupe.3G206900 Prunus persica HOM05D006530 ORTHO05D008283 2.8e-133 479.9 697 44.6
MELO3C019717.2 Cucumis melo HOM05D006530 ORTHO05D008283 3.7e-133 479.6 700 44.3
QL08p029933 Quercus lobata HOM05D006530 ORTHO05D008283 6.3e-133 478.8 719 43.0
TWI18G1412 Tripterygium wilfordii HOM05D006530 ORTHO05D008283 6.3e-133 478.8 654 45.3
Glyma.20G058500 Glycine max HOM05D006530 ORTHO05D008283 3.1e-132 476.5 618 45.3
Migut.H01255 Erythranthe guttata HOM05D006530 ORTHO05D008283 7.0e-132 475.3 625 44.5
VMungo0540G0580 Vigna mungo HOM05D006530 ORTHO05D008283 1.2e-131 474.6 612 46.9
Phvul.006G013400 Phaseolus vulgaris HOM05D006530 ORTHO05D008283 1.6e-131 474.2 611 45.8
FAN09G3579 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.6e-131 473.4 671 44.3
Atru.chr6.3294 Acer truncatum HOM05D006530 ORTHO05D008283 5.9e-131 472.2 683 44.5
CsaV3_6G015570 Cucumis sativus L. HOM05D006530 ORTHO05D008283 5.9e-131 472.2 706 43.8
Atru.chr6.3278 Acer truncatum HOM05D006530 ORTHO05D008283 7.7e-131 471.9 683 44.5
Medtr3g082840 Medicago truncatula HOM05D006530 ORTHO05D008283 1.3e-130 471.1 610 45.4
Peaxi162Scf00047g02037 Petunia axillaris HOM05D006530 ORTHO05D008283 2.2e-130 470.3 662 44.1
Sopen12g001950 Solanum pennellii HOM05D006530 ORTHO05D008283 2.2e-130 470.3 645 44.2
Ca_16350_v3 Cicer arietinum L. HOM05D006530 ORTHO05D008283 1.1e-129 468.0 629 45.5
Solyc12g005980.2 Solanum lycopersicum HOM05D006530 ORTHO05D008283 1.5e-129 467.6 676 43.5
THA.LOC104808864 Tarenaya hassleriana HOM05D006530 ORTHO05D008283 1.9e-129 467.2 648 44.6
SalBow3G0397 Salvia bowleyana HOM05D006530 ORTHO05D008283 5.5e-129 465.7 647 45.0
DCAR_019250 Daucus carota HOM05D006530 ORTHO05D008283 7.2e-129 465.3 661 45.5
Eucgr.K00730 Eucalyptus grandis HOM05D006530 ORTHO05D008283 9.4e-129 464.9 687 43.7
MSTRG.14123 Avicennia marina HOM05D006530 ORTHO05D008283 1.2e-128 464.5 645 45.1
PGR142G2443 Punica granatum HOM05D006530 ORTHO05D008283 2.1e-128 463.8 792 38.5
Manes.12G056700 Manihot esculenta HOM05D006530 ORTHO05D008283 3.6e-128 463.0 788 41.2
PGSC0003DMG400013890 Solanum tuberosum HOM05D006530 ORTHO05D008283 3.6e-128 463.0 640 44.2
Lalb_Chr08g0236491 Lupinus albus HOM05D006530 ORTHO05D008283 4.7e-128 462.6 632 45.4
arahy.Tifrunner.gnm1.ann1.KP8KK1 Arachis hypogaea HOM05D006530 ORTHO05D008283 6.1e-128 462.2 628 44.6
Aa31sc124G40 Aethionema arabicum HOM05D006530 ORTHO05D008283 1.4e-127 461.1 639 45.2
Psat5g104000 Pisum sativum HOM05D006530 ORTHO05D008283 2.3e-127 460.3 622 44.1
Cc05_g02470 Coffea canephora HOM05D006530 ORTHO05D008283 8.8e-127 458.4 641 43.5
AUR62015107 Chenopodium quinoa HOM05D006530 ORTHO05D008283 1.1e-126 458.0 661 43.6
AUR62017570 Chenopodium quinoa HOM05D006530 ORTHO05D008283 1.5e-126 457.6 671 42.9
arahy.Tifrunner.gnm1.ann1.B2HSRW Arachis hypogaea HOM05D006530 ORTHO05D008283 2.0e-126 457.2 614 45.0
EL10Ac9g22807 Beta vulgaris HOM05D006530 ORTHO05D008283 4.4e-126 456.1 688 41.7
ATR1128G020 Amborella trichopoda HOM05D006530 ORTHO05D008283 5.7e-126 455.7 774 40.1
CAN.G931.8 Capsicum annuum HOM05D006530 ORTHO05D008283 9.7e-126 454.9 643 43.7
GSVIVG01030533001 Vitis vinifera HOM05D006530 ORTHO05D008283 2.2e-125 453.8 616 45.9
AL7G44540 Arabidopsis lyrata HOM05D006530 ORTHO05D008283 2.8e-125 453.4 616 44.5
ECA236G0541 Erigeron canadensis HOM05D006530 ORTHO05D008283 5.3e-124 449.1 640 44.7
HanXRQChr16g0508331 Helianthus annuus HOM05D006530 ORTHO05D008283 1.2e-123 448.0 622 45.0
AT5G35690 Arabidopsis thaliana HOM05D006530 ORTHO05D008283 1.6e-123 447.6 626 44.4
Potri.014G160400 Populus trichocarpa HOM05D006530 ORTHO05D008283 1.6e-123 447.6 715 40.7
Lj1A785T50 Lonicera japonica HOM05D006530 ORTHO05D008283 3.5e-123 446.4 678 42.9
Hund24188 Selenicereus undatus HOM05D006530 ORTHO05D008283 3.8e-122 443.0 678 41.4
CANSAT64G1714 Cannabis sativa HOM05D006530 ORTHO05D008283 6.5e-122 442.2 684 41.8
Thhalv10003827m.g Eutrema salsugineum HOM05D006530 ORTHO05D008283 6.5e-122 442.2 621 43.6
Sabra14G0122100 Salix brachista HOM05D006530 ORTHO05D008283 6.5e-122 442.2 731 41.5
Sp7g06570 Schrenkiella parvula HOM05D006530 ORTHO05D008283 6.5e-122 442.2 627 44.0
Lj6g0023666 Lotus japonicus HOM05D006530 ORTHO05D008283 1.1e-121 441.4 614 43.0
Nitab4.5_0005875g0040 Nicotiana tabacum HOM05D006530 ORTHO05D008283 1.1e-121 441.4 636 45.3
SalBow1G8616 Salvia bowleyana HOM05D006530 ORTHO05D008283 1.1e-121 441.4 679 42.1
Carub.0007s3142 Capsella rubella HOM05D006530 ORTHO05D008283 3.2e-121 439.9 623 43.8
CARHR217000 Cardamine hirsuta HOM05D006530 ORTHO05D008283 4.2e-121 439.5 625 44.3
unitig_26.g9922 Utricularia gibba HOM05D006530 ORTHO05D008283 4.7e-120 436.0 618 43.4
Lsat_1_v5_gn_7_94721 Lactuca sativa HOM05D006530 ORTHO05D008283 8.0e-120 435.3 616 43.3
BcaC02g09488 Brassica carinata HOM05D006530 ORTHO05D008283 1.8e-119 434.1 622 43.2
Oeu061995.2 Olea europaea HOM05D006530 ORTHO05D008283 2.0e-118 430.6 747 38.7
C04p43360 Brassica napus HOM05D006530 ORTHO05D008283 2.6e-118 430.3 618 42.2
BolC4t25914H Brassica oleracea HOM05D006530 ORTHO05D008283 3.4e-118 429.9 618 42.4
CDE10G0969 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 4.4e-118 429.5 764 39.4
Sed0022132 Sechium edule HOM05D006530 ORTHO05D008283 6.3e-117 425.6 816 37.3
A04p09880 Brassica napus HOM05D006530 ORTHO05D008283 8.3e-117 425.2 621 42.2
BraA04t16650Z Brassica rapa HOM05D006530 ORTHO05D008283 8.3e-117 425.2 621 42.2
BcaB06g26968 Brassica carinata HOM05D006530 ORTHO05D008283 2.0e-115 420.6 630 41.6
FAN14G2540 Fragaria x ananassa HOM05D006530 ORTHO05D008283 1.5e-113 414.5 668 41.8
vmacro12144 Vaccinium macrocarpon HOM05D006530 ORTHO05D008283 1.8e-111 407.5 771 38.7
CiPaw.03G274100 Carya illinoinensis HOM05D006530 ORTHO05D008283 2.3e-106 390.6 576 43.6
Actinidia09758 Actinidia chinensis HOM05D006530 ORTHO05D008283 3.6e-104 383.3 668 40.1
Dinv08706 Davidia involucrata HOM05D006530 ORTHO05D008283 4.7e-104 382.9 614 41.9
Sc20g0005070 Simmondsia chinensis HOM05D006530 ORTHO05D008283 2.6e-102 377.1 585 41.5
FAN02G4367 Fragaria x ananassa HOM05D006530 ORTHO05D008283 1.3e-98 364.8 421 50.1
ATR1001G009 Amborella trichopoda HOM05D006530 ORTHO05D008283 1.7e-98 364.4 302 62.3
Pp3c20_8530 Physcomitrium patens HOM05D006530 ORTHO05D008283 1.6e-96 357.8 667 37.5
CDE10G0956 Ceratophyllum demersum HOM05D006530 ORTHO05D008283 2.3e-95 354.0 757 35.0
AagrBONN_evm.TU.Sc2ySwM_228.92 Anthoceros agrestis HOM05D006530 ORTHO05D008283 3.5e-91 340.1 729 35.5
SEGI_28144 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 2.5e-89 334.0 320 60.6
BcaB06g26965 Brassica carinata HOM05D006530 ORTHO05D008283 6.6e-74 282.7 373 45.8
Mapoly0071s0087 Marchantia polymorpha HOM05D006530 ORTHO05D008283 7.3e-73 279.3 318 50.0
SGA_v2.0_scaffold49G18363 Striga asiatica HOM05D006530 ORTHO05D008283 2.9e-69 267.3 613 32.8
TPR.G7490 Trifolium pratense HOM05D006530 ORTHO05D008283 1.5e-65 255.0 413 43.1
TPR.G22470 Trifolium pratense HOM05D006530 ORTHO05D008283 3.6e-56 223.8 201 54.2
ClCG02G018190 Citrullus lanatus HOM05D006530 ORTHO05D008283 8.2e-40 169.5 640 27.7
Cre16.g684000 Chlamydomonas reinhardtii HOM05D006530 ORTHO05D008283 4.5e-38 163.7 249 38.6
MCO07G103 Micromonas commoda HOM05D006530 ORTHO05D008283 1.8e-34 151.8 302 33.8
MD17G1108500 Malus domestica HOM05D006530 ORTHO05D008283 4.3e-33 147.1 604 26.5
SEGI_11846 Sequoiadendron giganteum HOM05D006530 ORTHO05D008283 4.5e-30 137.1 152 48.7
FAN03G2558 Fragaria x ananassa HOM05D006530 ORTHO05D008283 1.0e-29 136.0 146 49.3
FAN15G1469 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.3e-26 124.8 117 52.1
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 2.3e-26 124.8 117 52.1
FAN27G2805 Fragaria x ananassa HOM05D006530 ORTHO05D008283 2.3e-26 124.8 117 52.1
Cfa025683 Carpinus fangiana HOM05D006530 ORTHO05D008283 7.2e-20 103.2 330 28.2
BcaB06g26964 Brassica carinata HOM05D006530 ORTHO05D008283 6.7e-18 96.7 80 56.2
SGA_v2.0_scaffold112G31585 Striga asiatica HOM05D006530 ORTHO05D008283 7.0e-15 86.7 111 44.1
Lj6g0015704 Lotus japonicus HOM05D003423 ORTHO05D003910 7.5e-09 66.6 165 32.7
arahy.Tifrunner.gnm1.ann1.HUB5JH Arachis hypogaea HOM05D003423 ORTHO05D003910 4.8e-08 63.9 165 32.1
FvH4_3g29470 Fragaria vesca HOM05D003423 ORTHO05D003910 4.8e-08 63.9 92 37.0
arahy.Tifrunner.gnm1.ann1.08VBYE Arachis hypogaea HOM05D003423 ORTHO05D003910 6.3e-08 63.5 165 32.1
arahy.Tifrunner.gnm1.ann1.FCEI8S Arachis hypogaea HOM05D003423 ORTHO05D003910 6.3e-08 63.5 165 32.1
CDE04G0040 Ceratophyllum demersum HOM05D003423 ORTHO05D003910 6.3e-08 63.5 144 36.1
ClCG09G021170 Citrullus lanatus HOM05D003423 ORTHO05D003910 6.3e-08 63.5 143 33.6
MELO3C009034.2 Cucumis melo HOM05D003423 ORTHO05D003910 6.3e-08 63.5 148 34.5
Manes.15G061600 Manihot esculenta HOM05D003423 ORTHO05D003910 8.2e-08 63.2 113 33.6
CsaV3_7G018340 Cucumis sativus L. HOM05D003423 ORTHO05D003910 1.4e-07 62.4 143 33.6
MBI19_g29441_MAGBIO Magnolia biondii HOM05D006530 ORTHO05D008283 1.4e-07 62.4 93 40.9
Ciclev10027497m.g Citrus clementina HOM05D003423 ORTHO05D003910 1.8e-07 62.0 144 34.0
MELO3C024918.2 Cucumis melo HOM05D003423 ORTHO05D003910 1.8e-07 62.0 143 33.6
Glyma.18G078800 Glycine max HOM05D003423 ORTHO05D003910 1.8e-07 62.0 113 31.9
Aqoxy6G02866 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 2.4e-07 61.6 113 33.6
Dinv10321 Davidia involucrata HOM05D003423 ORTHO05D003910 2.4e-07 61.6 143 34.3
MBI16_g46430_MAGBIO Magnolia biondii HOM05D003423 ORTHO05D003910 2.4e-07 61.6 283 25.8
SMO361G0751 Selaginella moellendorffii HOM05D003423 ORTHO05D003910 2.4e-07 61.6 151 31.1
AL1G64060 Arabidopsis lyrata HOM05D003423 ORTHO05D003910 3.1e-07 61.2 164 31.7
CBR_g12763 Chara braunii HOM05D003423 ORTHO05D003910 3.1e-07 61.2 110 36.4
Atru.chr1.2766 Acer truncatum HOM05D003423 ORTHO05D003910 4.1e-07 60.8 144 33.3
ATR0580G345 Amborella trichopoda HOM05D003423 ORTHO05D003910 4.1e-07 60.8 144 34.7
Phvul.006G055600 Phaseolus vulgaris HOM05D003423 ORTHO05D003910 4.1e-07 60.8 114 33.3
Prupe.3G168300 Prunus persica HOM05D003423 ORTHO05D003910 4.1e-07 60.8 144 32.6
PGR102G0515 Punica granatum HOM05D003423 ORTHO05D003910 4.1e-07 60.8 144 33.3
Cfa022425 Carpinus fangiana HOM05D003423 ORTHO05D003910 5.3e-07 60.5 162 30.9
Oeu051387.2 Olea europaea HOM05D003423 ORTHO05D003910 5.3e-07 60.5 144 34.7
TAR624G0752 Trochodendron aralioides HOM05D003423 ORTHO05D003910 5.3e-07 60.5 144 33.3
VMungo0540G0232 Vigna mungo HOM05D003423 ORTHO05D003910 5.3e-07 60.5 113 31.9
AagrBONN_evm.TU.Sc2ySwM_228.5488 Anthoceros agrestis HOM05D003423 ORTHO05D003910 9.1e-07 59.7 92 38.0
Lj1A888G39 Lonicera japonica HOM05D003423 ORTHO05D003910 9.1e-07 59.7 113 31.0
PSO063G5220 Papaver somniferum HOM05D003423 ORTHO05D003910 9.1e-07 59.7 114 32.5
PSO782G1032 Papaver somniferum HOM05D003423 ORTHO05D003910 9.1e-07 59.7 113 31.0
TWI39G0701 Tripterygium wilfordii HOM05D003423 ORTHO05D003910 9.1e-07 59.7 306 25.5
Atru.chr2.3667 Acer truncatum HOM05D003423 ORTHO05D003910 1.2e-06 59.3 113 31.0
EL10Ac7g18155 Beta vulgaris HOM05D003423 ORTHO05D003910 1.2e-06 59.3 144 34.0
FAN25G2240 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.2e-06 59.3 93 38.7
Potri.011G092900 Populus trichocarpa HOM05D003423 ORTHO05D003910 1.2e-06 59.3 168 30.4
Sabra08G0005700 Salix brachista HOM05D003423 ORTHO05D003910 1.2e-06 59.3 144 31.9
SHI10239 Sapria himalayana HOM05D006530 ORTHO05D008283 1.2e-06 59.3 99 32.3
TPR.G30741 Trifolium pratense HOM05D003423 ORTHO05D003910 1.2e-06 59.3 165 30.9
ClCG04G000610 Citrullus lanatus HOM05D003423 ORTHO05D003910 1.6e-06 58.9 148 33.1
Cc04_g00490 Coffea canephora HOM05D003423 ORTHO05D003910 2.0e-06 58.5 144 32.6
Eucgr.F03997 Eucalyptus grandis HOM05D003423 ORTHO05D003910 2.0e-06 58.5 92 37.0
Lalb_Chr15g0081991 Lupinus albus HOM05D003423 ORTHO05D003910 2.7e-06 58.2 165 30.3
Lj9A540T81 Lonicera japonica HOM05D003423 ORTHO05D003910 3.5e-06 57.8 143 33.6
Nitab4.5_0001691g0030 Nicotiana tabacum HOM05D003423 ORTHO05D003910 3.5e-06 57.8 144 32.6
Ca_12436_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 4.5e-06 57.4 113 31.0
HanXRQChr09g0277351 Helianthus annuus HOM05D003423 ORTHO05D003910 4.5e-06 57.4 148 31.8
Manes.03G139900 Manihot esculenta HOM05D003423 ORTHO05D003910 4.5e-06 57.4 116 30.2
Sed0010386 Sechium edule HOM05D003423 ORTHO05D003910 4.5e-06 57.4 149 32.2
TAR626G1285 Trochodendron aralioides HOM05D003423 ORTHO05D003910 4.5e-06 57.4 144 32.6
GSVIVG01014644001 Vitis vinifera HOM05D003423 ORTHO05D003910 4.5e-06 57.4 92 34.8
Oeu041432.1 Olea europaea HOM05D003423 ORTHO05D003910 5.9e-06 57.0 144 31.9
Os06g0191200 Oryza sativa ssp. japonica HOM05D003423 ORTHO05D003910 5.9e-06 57.0 146 33.6
Rhsim04G0013800 Rhododendron simsii HOM05D003423 ORTHO05D003910 5.9e-06 57.0 144 31.2
VMungo1080G0425 Vigna mungo HOM05D003423 ORTHO05D003910 5.9e-06 57.0 144 31.9
CAN.G790.42 Capsicum annuum HOM05D003423 ORTHO05D003910 7.7e-06 56.6 144 31.9
Rhsim08G0246600 Rhododendron simsii HOM05D003423 ORTHO05D003910 7.7e-06 56.6 144 30.6


User provided reference genes

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