Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018339 Vanilla planifolia HOM05D000821 ORTHO05D005255 1.6e-23 112.1 64 100.0
SGA_v2.0_scaffold14G06782 Striga asiatica HOM05D000821 ORTHO05D005255 3.7e-12 74.3 51 70.6
CSS0024970 Camellia sinensis var. sinensis HOM05D000821 ORTHO05D005255 8.3e-12 73.2 61 62.3
CDE07G0496 Ceratophyllum demersum HOM05D000821 ORTHO05D005255 2.4e-11 71.6 51 70.6
HPP92_018539 Vanilla planifolia HOM05D000821 ORTHO05D005255 2.4e-11 71.6 46 76.1
Nitab4.5_0013699g0020 Nicotiana tabacum HOM05D000821 ORTHO05D005255 4.1e-11 70.9 57 68.4
Ciclev10013834m.g Citrus clementina HOM05D000821 ORTHO05D005255 5.4e-11 70.5 56 60.7
vmacro13068 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 9.2e-11 69.7 53 77.4
CSS0036603 Camellia sinensis var. sinensis HOM05D000821 ORTHO05D005255 1.2e-10 69.3 62 58.1
Dinv33898 Davidia involucrata HOM05D000821 ORTHO05D005255 2.0e-10 68.6 59 55.9
TAR626G1302 Trochodendron aralioides HOM05D000821 ORTHO05D005255 2.0e-10 68.6 54 59.3
Dinv27410 Davidia involucrata HOM05D000821 ORTHO05D005255 2.7e-10 68.2 52 67.3
Lju237C1T16 Lonicera japonica HOM05D000821 ORTHO05D005255 3.5e-10 67.8 53 64.2
Manes.14G094100 Manihot esculenta HOM05D000821 ORTHO05D005255 3.5e-10 67.8 50 64.0
Ciclev10033607m.g Citrus clementina HOM05D000821 ORTHO05D000931 4.6e-10 67.4 54 61.1
Rhsim01G0021000 Rhododendron simsii HOM05D000821 ORTHO05D005255 4.6e-10 67.4 63 63.5
SalBow1G0065 Salvia bowleyana HOM05D000821 ORTHO05D000931 4.6e-10 67.4 46 71.7
SalBow1G6886 Salvia bowleyana HOM05D000821 ORTHO05D000931 4.6e-10 67.4 46 71.7
GSVIVG01023708001 Vitis vinifera HOM05D000821 ORTHO05D005255 4.6e-10 67.4 54 74.1
Manes.01G106700 Manihot esculenta HOM05D000821 ORTHO05D005255 6.0e-10 67.0 45 73.3
Actinidia30172 Actinidia chinensis HOM05D000821 ORTHO05D005255 7.8e-10 66.6 53 62.3
FAN02G3078 Fragaria x ananassa HOM05D000821 ORTHO05D005255 7.8e-10 66.6 61 57.4
FAN05G4080 Fragaria x ananassa HOM05D000821 ORTHO05D005255 7.8e-10 66.6 51 64.7
FAN09G0163 Fragaria x ananassa HOM05D000821 ORTHO05D005255 7.8e-10 66.6 51 64.7
FAN14G4322 Fragaria x ananassa HOM05D000821 ORTHO05D005255 7.8e-10 66.6 51 64.7
arahy.Tifrunner.gnm1.ann1.R5A4WZ Arachis hypogaea HOM05D000821 ORTHO05D005255 1.0e-09 66.2 56 58.9
Eucgr.J01448 Eucalyptus grandis HOM05D000821 ORTHO05D005255 1.0e-09 66.2 52 63.5
Sed0003314 Sechium edule HOM05D000821 ORTHO05D005255 1.0e-09 66.2 50 80.0
Haze_19064 Corylus avellana HOM05D000821 ORTHO05D005255 1.3e-09 65.9 50 66.0
Haze_19070 Corylus avellana HOM05D000821 ORTHO05D005255 1.3e-09 65.9 50 66.0
MD09G1079900 Malus domestica HOM05D000821 ORTHO05D005255 1.3e-09 65.9 47 70.2
Sabra17G0091400 Salix brachista HOM05D000821 ORTHO05D005255 1.3e-09 65.9 52 59.6
Solyc05g010425.1 Solanum lycopersicum HOM05D000821 ORTHO05D005255 1.3e-09 65.9 51 82.4
Peaxi162Scf01056g00028 Petunia axillaris HOM05D000821 ORTHO05D000931 1.7e-09 65.5 49 65.3
SalBow8G0588 Salvia bowleyana HOM05D000821 ORTHO05D000931 1.7e-09 65.5 50 64.0
SalBow8G4660 Salvia bowleyana HOM05D000821 ORTHO05D000931 1.7e-09 65.5 50 64.0
Aqoxy7G03268 Aquilegia oxysepala HOM05D000821 ORTHO05D005255 2.3e-09 65.1 44 68.2
Haze_14083 Corylus avellana HOM05D000821 ORTHO05D005255 2.3e-09 65.1 52 63.5
MD17G1070400 Malus domestica HOM05D000821 ORTHO05D005255 2.3e-09 65.1 45 71.1
Nn2g12502 Nelumbo nucifera HOM05D000821 ORTHO05D005255 2.3e-09 65.1 44 68.2
Phvul.008G022200 Phaseolus vulgaris HOM05D000821 ORTHO05D005255 2.3e-09 65.1 44 68.2
RcHm_v2.0_Chr4g0436751 Rosa chinensis HOM05D000821 ORTHO05D005255 2.3e-09 65.1 46 67.4
Actinidia24035 Actinidia chinensis HOM05D000821 ORTHO05D005255 3.0e-09 64.7 57 71.9
arahy.Tifrunner.gnm1.ann1.8KG9MP Arachis hypogaea HOM05D000821 ORTHO05D005255 3.0e-09 64.7 48 68.8
CsaV3_3G020550 Cucumis sativus L. HOM05D000821 ORTHO05D005255 3.0e-09 64.7 61 67.2
FvH4_4g28640 Fragaria vesca HOM05D000821 ORTHO05D005255 3.0e-09 64.7 46 65.2
MBI15_g07488_MAGBIO Magnolia biondii HOM05D000821 ORTHO05D005255 3.0e-09 64.7 48 64.6
RcHm_v2.0_Chr2g0163951 Rosa chinensis HOM05D000821 ORTHO05D005255 3.0e-09 64.7 46 69.6
Thecc.04G145800 Theobroma cacao HOM05D000821 ORTHO05D000931 3.0e-09 64.7 47 68.1
Atru.chr8.734 Acer truncatum HOM05D000821 ORTHO05D005255 3.9e-09 64.3 45 71.1
arahy.Tifrunner.gnm1.ann1.5E9M75 Arachis hypogaea HOM05D000821 ORTHO05D005255 3.9e-09 64.3 48 62.5
Ciclev10010716m.g Citrus clementina HOM05D000821 ORTHO05D005255 3.9e-09 64.3 50 62.0
MELO3C023786.2 Cucumis melo HOM05D000821 ORTHO05D005255 3.9e-09 64.3 48 81.2
FAN17G0115 Fragaria x ananassa HOM05D000821 ORTHO05D005255 3.9e-09 64.3 47 61.7
MBI14_g04840_MAGBIO Magnolia biondii HOM05D000821 ORTHO05D005255 3.9e-09 64.3 46 60.9
MBI14_g36371_MAGBIO Magnolia biondii HOM05D000821 ORTHO05D005255 3.9e-09 64.3 46 60.9
Manes.02G063600 Manihot esculenta HOM05D000821 ORTHO05D005255 3.9e-09 64.3 45 71.1
Prupe.3G243800 Prunus persica HOM05D000821 ORTHO05D005255 3.9e-09 64.3 45 71.1
CsaV3_2G007760 Cucumis sativus L. HOM05D000821 ORTHO05D005255 5.0e-09 63.9 55 70.9
Duzib150G0377 Durio zibethinus HOM05D000821 ORTHO05D000931 5.0e-09 63.9 49 63.3
FAN07G0329 Fragaria x ananassa HOM05D000821 ORTHO05D005255 5.0e-09 63.9 46 65.2
Hma1.2p1_0189F.1_g082770 Hydrangea macrophylla HOM05D000821 ORTHO05D000931 5.0e-09 63.9 45 66.7
Lj4C128G17 Lonicera japonica HOM05D000821 ORTHO05D005255 5.0e-09 63.9 52 61.5
Nitab4.5_0000259g0260 Nicotiana tabacum HOM05D000821 ORTHO05D000931 5.0e-09 63.9 44 70.5
RcHm_v2.0_Chr7g0221071 Rosa chinensis HOM05D000821 ORTHO05D005255 5.0e-09 63.9 46 65.2
Solyc02g150147.1 Solanum lycopersicum HOM05D000821 ORTHO05D005255 5.0e-09 63.9 45 66.7
arahy.Tifrunner.gnm1.ann1.0034KJ Arachis hypogaea HOM05D000821 ORTHO05D000931 6.6e-09 63.5 47 61.7
EL10Ac2g04650 Beta vulgaris HOM05D000821 ORTHO05D005255 6.6e-09 63.5 49 67.3
CAN.G184.34 Capsicum annuum HOM05D000821 ORTHO05D005255 6.6e-09 63.5 47 85.1
Glyma.01G071400 Glycine max HOM05D000821 ORTHO05D005255 6.6e-09 63.5 49 79.6
Glyma.02G128100 Glycine max HOM05D000821 ORTHO05D005255 6.6e-09 63.5 54 72.2
Gohir.A08G035700 Gossypium hirsutum HOM05D000821 ORTHO05D005255 6.6e-09 63.5 47 66.0
Gohir.D08G046400 Gossypium hirsutum HOM05D000821 ORTHO05D005255 6.6e-09 63.5 47 66.0
Nitab4.5_0001965g0070 Nicotiana tabacum HOM05D000821 ORTHO05D000931 6.6e-09 63.5 52 63.5
Oeu027423.1 Olea europaea HOM05D000821 ORTHO05D005255 6.6e-09 63.5 49 63.3
TAR622G0438 Trochodendron aralioides HOM05D000821 ORTHO05D005255 6.6e-09 63.5 46 63.0
BcaC05g30356 Brassica carinata HOM05D000821 ORTHO05D005255 8.6e-09 63.2 49 57.1
CSS0025095 Camellia sinensis var. sinensis HOM05D000821 ORTHO05D005255 8.6e-09 63.2 49 63.3
Ca_06718_v3 Cicer arietinum L. HOM05D000821 ORTHO05D000931 8.6e-09 63.2 49 65.3
Gohir.A03G108166 Gossypium hirsutum HOM05D000821 ORTHO05D005255 8.6e-09 63.2 47 68.1
Gohir.D02G133300 Gossypium hirsutum HOM05D000821 ORTHO05D005255 8.6e-09 63.2 47 68.1
Gorai.005G149200 Gossypium raimondii HOM05D000821 ORTHO05D005255 8.6e-09 63.2 47 68.1
Lalb_Chr17g0341711 Lupinus albus HOM05D000821 ORTHO05D005255 8.6e-09 63.2 50 64.0
Peaxi162Scf00026g00023 Petunia axillaris HOM05D000821 ORTHO05D000931 8.6e-09 63.2 49 65.3
Phvul.003G044300 Phaseolus vulgaris HOM05D000821 ORTHO05D005255 8.6e-09 63.2 49 77.6
Thecc.02G316800 Theobroma cacao HOM05D000821 ORTHO05D005255 8.6e-09 63.2 47 68.1
Cc11_g11120 Coffea canephora HOM05D000821 ORTHO05D005255 1.1e-08 62.8 47 66.0
Migut.H00559 Erythranthe guttata HOM05D000821 ORTHO05D005255 1.1e-08 62.8 46 65.2
Migut.L01129 Erythranthe guttata HOM05D000821 ORTHO05D005255 1.1e-08 62.8 46 63.0
Prupe.1G299600 Prunus persica HOM05D000821 ORTHO05D005255 1.1e-08 62.8 47 66.0
vmacro18092 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 1.1e-08 62.8 49 63.3
Nn4g23620 Nelumbo nucifera HOM05D000821 ORTHO05D005255 1.5e-08 62.4 53 58.5
Nitab4.5_0001036g0070 Nicotiana tabacum HOM05D000821 ORTHO05D000931 1.5e-08 62.4 56 66.1
vmacro05595 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 1.5e-08 62.4 48 66.7
CSS0041318 Camellia sinensis var. sinensis HOM05D000821 ORTHO05D005255 1.9e-08 62.0 48 64.6
Cfa010145 Carpinus fangiana HOM05D000821 ORTHO05D005255 1.9e-08 62.0 52 57.7
Cc07_g04850 Coffea canephora HOM05D000821 ORTHO05D005255 1.9e-08 62.0 47 68.1
Gohir.D13G089300 Gossypium hirsutum HOM05D000821 ORTHO05D005255 1.9e-08 62.0 47 66.0
Lalb_Chr17g0336661 Lupinus albus HOM05D000821 ORTHO05D005255 1.9e-08 62.0 44 65.9
TAR383G0646 Trochodendron aralioides HOM05D000821 ORTHO05D005255 1.9e-08 62.0 44 65.9
unitig_22.g6888 Utricularia gibba HOM05D000821 ORTHO05D000931 1.9e-08 62.0 49 57.1
unitig_8.g3214 Utricularia gibba HOM05D000821 ORTHO05D005255 1.9e-08 62.0 53 58.5
BcaC04g18922 Brassica carinata HOM05D000821 ORTHO05D005255 2.5e-08 61.6 55 54.5
ClCG05G011880 Citrullus lanatus HOM05D000821 ORTHO05D005255 2.5e-08 61.6 48 79.2
Potri.010G133850 Populus trichocarpa HOM05D000821 ORTHO05D005255 2.5e-08 61.6 47 63.8
SGA_v2.0_scaffold16G07853 Striga asiatica HOM05D000821 ORTHO05D000931 2.5e-08 61.6 45 66.7
BcaC05g30359 Brassica carinata HOM05D000821 ORTHO05D005255 3.3e-08 61.2 47 59.6
BolC5t35081H Brassica oleracea HOM05D000821 ORTHO05D005255 3.3e-08 61.2 47 59.6
CARHR076440 Cardamine hirsuta HOM05D000821 ORTHO05D005255 3.3e-08 61.2 48 77.1
CiPaw.04G005200 Carya illinoinensis HOM05D000821 ORTHO05D005255 3.3e-08 61.2 48 64.6
Manes.14G114200 Manihot esculenta HOM05D000821 ORTHO05D005255 3.3e-08 61.2 46 65.2
vmacro01279 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 3.3e-08 61.2 58 69.0
Aa31LG11G13650 Aethionema arabicum HOM05D000821 ORTHO05D005255 4.3e-08 60.8 50 58.0
Glyma.08G255850 Glycine max HOM05D000821 ORTHO05D005255 4.3e-08 60.8 46 67.4
Gohir.A13G095100 Gossypium hirsutum HOM05D000821 ORTHO05D005255 4.3e-08 60.8 47 63.8
Cpa.g.sc70.17 Carica papaya HOM05D000821 ORTHO05D005255 5.6e-08 60.5 49 77.6
CiPaw.06G097100 Carya illinoinensis HOM05D000821 ORTHO05D005255 5.6e-08 60.5 46 65.2
DCAR_007213 Daucus carota HOM05D000821 ORTHO05D000931 5.6e-08 60.5 47 61.7
PSO063G0195 Papaver somniferum HOM05D000821 ORTHO05D000931 5.6e-08 60.5 45 64.4
PSO782G4241 Papaver somniferum HOM05D000821 ORTHO05D000931 5.6e-08 60.5 45 64.4
ATR0580G204 Amborella trichopoda HOM05D000821 ORTHO05D005255 7.3e-08 60.1 45 64.4
BcaC09g47703 Brassica carinata HOM05D000821 ORTHO05D000931 7.3e-08 60.1 53 67.9
CiPaw.03G007300 Carya illinoinensis HOM05D000821 ORTHO05D005255 7.3e-08 60.1 45 66.7
Medtr0076s0010 Medicago truncatula HOM05D000821 ORTHO05D005255 7.3e-08 60.1 51 70.6
Potri.018G101400 Populus trichocarpa HOM05D000821 ORTHO05D005255 7.3e-08 60.1 48 77.1
Thecc.09G155600 Theobroma cacao HOM05D000821 ORTHO05D005255 7.3e-08 60.1 48 60.4
TWI32G0656 Tripterygium wilfordii HOM05D000821 ORTHO05D000931 7.3e-08 60.1 45 64.4
BraA10t44380Z Brassica rapa HOM05D000821 ORTHO05D005255 9.5e-08 59.7 49 71.4
CARHR197360 Cardamine hirsuta HOM05D000821 ORTHO05D005255 9.5e-08 59.7 46 60.9
Lalb_Chr04g0255261 Lupinus albus HOM05D000821 ORTHO05D005255 9.5e-08 59.7 49 75.5
Lalb_Chr21g0318051 Lupinus albus HOM05D000821 ORTHO05D005255 9.5e-08 59.7 46 63.0
Aa31LG2G6740 Aethionema arabicum HOM05D000821 ORTHO05D005255 1.2e-07 59.3 47 68.1
BcaC01g04446 Brassica carinata HOM05D000821 ORTHO05D005255 1.2e-07 59.3 48 60.4
BolC3t16271H Brassica oleracea HOM05D000821 ORTHO05D005255 1.2e-07 59.3 48 60.4
BraA05t23139Z Brassica rapa HOM05D000821 ORTHO05D000931 1.2e-07 59.3 49 71.4
Ca_02275_v3 Cicer arietinum L. HOM05D000821 ORTHO05D000931 1.2e-07 59.3 55 67.3
BolC1t05902H Brassica oleracea HOM05D000821 ORTHO05D000931 1.6e-07 58.9 51 56.9
Cpa.g.sc53.16 Carica papaya HOM05D000821 ORTHO05D005255 1.6e-07 58.9 48 77.1
Cpa.g.sc718.1 Carica papaya HOM05D000821 ORTHO05D005255 1.6e-07 58.9 46 60.9
Gohir.A05G007400 Gossypium hirsutum HOM05D000821 ORTHO05D005255 1.6e-07 58.9 46 76.1
Lj2g0000747 Lotus japonicus HOM05D000821 ORTHO05D005255 1.6e-07 58.9 51 72.5
Lalb_Chr10g0099471 Lupinus albus HOM05D000821 ORTHO05D005255 1.6e-07 58.9 50 74.0
Zm00001eb313410 Zea mays HOM05D000821 ORTHO05D005255 1.6e-07 58.9 45 64.4
A03p07480 Brassica napus HOM05D000821 ORTHO05D005255 2.1e-07 58.5 59 50.8
Glyma.18G278850 Glycine max HOM05D000821 ORTHO05D005255 2.1e-07 58.5 46 65.2
Gohir.D05G008300 Gossypium hirsutum HOM05D000821 ORTHO05D005255 2.1e-07 58.5 47 74.5
Nitab4.5_0022449g0010 Nicotiana tabacum HOM05D000821 ORTHO05D000931 2.1e-07 58.5 62 51.6
Potri.004G106750 Populus trichocarpa HOM05D000821 ORTHO05D005255 2.1e-07 58.5 47 74.5
Potri.017G108901 Populus trichocarpa HOM05D000821 ORTHO05D005255 2.1e-07 58.5 49 75.5
C03p08680 Brassica napus HOM05D000821 ORTHO05D005255 2.8e-07 58.2 49 57.1
BolC3t13368H Brassica oleracea HOM05D000821 ORTHO05D005255 2.8e-07 58.2 49 57.1
Carub.0003s0156 Capsella rubella HOM05D000821 ORTHO05D005255 2.8e-07 58.2 48 58.3
Carub.0006s1414 Capsella rubella HOM05D000821 ORTHO05D005255 2.8e-07 58.2 47 57.4
BcaB04g21409 Brassica carinata HOM05D000821 ORTHO05D000931 3.6e-07 57.8 47 74.5
BraA03t12462Z Brassica rapa HOM05D000821 ORTHO05D000931 3.6e-07 57.8 46 60.9
Mapoly0001s0544 Marchantia polymorpha HOM05D000821 ORTHO05D005255 3.6e-07 57.8 45 62.2
BcaB08g36873 Brassica carinata HOM05D000821 ORTHO05D000931 4.7e-07 57.4 49 69.4
CiPaw.15G163200 Carya illinoinensis HOM05D000821 ORTHO05D005255 4.7e-07 57.4 46 60.9
Ah.02g127380 Amaranthus hybridus HOM05D000821 ORTHO05D000931 6.2e-07 57.0 47 63.8
Oeu054563.1 Olea europaea HOM05D000821 ORTHO05D000931 6.2e-07 57.0 44 63.6
Sc15g0002360 Simmondsia chinensis HOM05D000821 ORTHO05D005255 6.2e-07 57.0 44 59.1
TWI34G0974 Tripterygium wilfordii HOM05D000821 ORTHO05D000931 8.1e-07 56.6 46 60.9
Lj1g0021287 Lotus japonicus HOM05D000821 ORTHO05D005255 1.1e-06 56.2 45 62.2
Nitab4.5_0004508g0030 Nicotiana tabacum HOM05D000821 ORTHO05D005255 1.1e-06 56.2 46 58.7
Medtr0003s0660 Medicago truncatula HOM05D000821 ORTHO05D000931 1.4e-06 55.8 49 59.2
CAN.G48.22 Capsicum annuum HOM05D000821 ORTHO05D005255 1.8e-06 55.5 47 55.3
DCAR_020093 Daucus carota HOM05D000821 ORTHO05D000931 1.8e-06 55.5 48 56.2
Thhalv10015839m.g Eutrema salsugineum HOM05D000821 ORTHO05D005255 1.8e-06 55.5 47 57.4
BNapus_Darmor_BZH_scaffold_208p00020 Brassica napus HOM05D000821 ORTHO05D000931 2.3e-06 55.1 54 63.0
Medtr7g018310 Medicago truncatula HOM05D000821 ORTHO05D000931 2.3e-06 55.1 49 71.4
Hund26423 Selenicereus undatus HOM05D000821 ORTHO05D005255 2.3e-06 55.1 53 67.9
BraA03t10077Z Brassica rapa HOM05D000821 ORTHO05D005255 3.1e-06 54.7 47 57.4
BraSC141t45632Z Brassica rapa HOM05D000821 ORTHO05D000931 3.1e-06 54.7 61 62.3
Medtr7g018320 Medicago truncatula HOM05D000821 ORTHO05D000931 4.0e-06 54.3 46 60.9
Haze_11816 Corylus avellana HOM05D000821 ORTHO05D005255 6.8e-06 53.5 30 76.7


User provided reference genes

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