Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 2.1e-101 372.5 204 100.0
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 4.3e-54 215.3 208 64.9
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 9.6e-54 214.2 203 63.5
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 7.6e-51 204.5 210 58.1
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 7.6e-51 204.5 210 59.0
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 1.0e-50 204.1 196 60.7
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 4.9e-50 201.8 204 59.3
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 8.4e-50 201.1 205 59.5
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 8.4e-50 201.1 210 56.7
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 1.9e-49 199.9 203 60.1
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 1.9e-49 199.9 199 61.8
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 1.9e-49 199.9 213 59.2
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 3.2e-49 199.1 212 59.4
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 4.2e-49 198.7 205 59.5
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 5.5e-49 198.4 205 58.5
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 5.5e-49 198.4 212 58.5
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 7.1e-49 198.0 214 57.5
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 7.1e-49 198.0 228 53.5
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 7.1e-49 198.0 202 56.9
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.6e-48 196.8 209 54.5
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 1.6e-48 196.8 213 57.3
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 2.7e-48 196.1 212 57.5
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 2.7e-48 196.1 200 57.0
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 2.7e-48 196.1 229 53.7
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 3.5e-48 195.7 210 57.6
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 4.6e-48 195.3 229 51.5
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 4.6e-48 195.3 214 56.5
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 4.6e-48 195.3 212 58.5
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 4.6e-48 195.3 211 56.9
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 4.6e-48 195.3 204 58.3
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 6.0e-48 194.9 214 57.5
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 6.0e-48 194.9 212 57.1
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 7.9e-48 194.5 203 58.1
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 1.0e-47 194.1 212 57.1
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 1.8e-47 193.4 229 50.7
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 3.0e-47 192.6 219 53.9
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 3.9e-47 192.2 210 53.3
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 5.1e-47 191.8 212 57.5
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 5.1e-47 191.8 210 52.9
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 6.7e-47 191.4 205 56.6
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 1.5e-46 190.3 213 54.9
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 1.5e-46 190.3 214 54.7
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 1.9e-46 189.9 214 54.7
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 1.9e-46 189.9 216 55.6
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 1.9e-46 189.9 209 58.4
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 3.3e-46 189.1 201 58.7
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 3.3e-46 189.1 230 50.9
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 4.3e-46 188.7 214 57.0
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 4.3e-46 188.7 208 57.7
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 5.7e-46 188.3 204 57.8
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 1.3e-45 187.2 205 54.1
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 1.3e-45 187.2 207 56.0
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 1.6e-45 186.8 214 53.7
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.1e-45 186.4 209 53.6
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 2.1e-45 186.4 208 57.2
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 3.7e-45 185.7 209 55.5
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 6.3e-45 184.9 202 57.4
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 1.1e-44 184.1 207 55.6
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 1.4e-44 183.7 212 58.5
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 1.4e-44 183.7 204 57.4
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.8e-44 183.3 202 55.9
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 3.1e-44 182.6 217 54.4
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 3.1e-44 182.6 202 54.5
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 4.1e-44 182.2 202 56.4
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 5.3e-44 181.8 149 67.1
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 5.3e-44 181.8 207 56.5
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 9.0e-44 181.0 202 56.4
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 9.0e-44 181.0 202 55.9
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 1.2e-43 180.6 211 55.0
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 2.0e-43 179.9 213 53.1
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.4e-43 179.1 211 56.9
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 5.9e-43 178.3 202 56.4
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 7.6e-43 177.9 202 55.4
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 7.6e-43 177.9 202 55.4
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 2.2e-42 176.4 199 55.8
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 2.2e-42 176.4 199 55.8
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 2.2e-42 176.4 199 55.8
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 2.9e-42 176.0 203 55.7
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 2.9e-42 176.0 211 55.0
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 3.8e-42 175.6 209 53.1
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 1.1e-41 174.1 124 75.0
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 5.5e-41 171.8 199 55.3
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 5.5e-41 171.8 199 55.3
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 7.2e-41 171.4 209 50.7
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 2.1e-40 169.9 203 50.2
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 3.6e-40 169.1 217 50.7
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 4.6e-40 168.7 211 52.1
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 4.6e-40 168.7 185 56.2
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 4.6e-40 168.7 201 52.7
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 6.1e-40 168.3 203 53.2
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 7.9e-40 167.9 223 49.8
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 1.8e-39 166.8 217 52.1
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 6.7e-39 164.9 222 48.6
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 1.1e-38 164.1 117 72.6
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.5e-38 163.7 117 73.5
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 4.3e-38 162.2 113 76.1
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 1.8e-36 156.8 219 50.2
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 1.2e-35 154.1 140 64.3
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.2e-33 146.0 166 56.6
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 3.9e-31 139.0 89 79.8
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 2.0e-30 136.7 86 81.4
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 9.7e-30 134.4 206 46.6
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 6.1e-24 115.2 82 72.0
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.4e-22 109.0 153 48.4
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 5.7e-22 108.6 153 47.7
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 9.7e-22 107.8 206 38.8
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 1.1e-20 104.4 207 41.5
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 1.8e-20 103.6 212 38.7
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 7.7e-19 98.2 191 40.8
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.9e-18 96.3 209 40.2
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 3.6e-16 89.4 138 43.5
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 9.1e-12 74.7 144 41.0
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 2.0e-11 73.6 44 81.8
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.5e-11 72.8 46 80.4
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 4.5e-11 72.4 209 34.9
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 4.5e-11 72.4 44 77.3
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 9.4e-09 64.7 155 33.5
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 3.0e-07 59.7 213 31.0
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 3.0e-07 59.7 46 60.9
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 7.5e-06 55.1 153 37.3


User provided reference genes

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