Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 6.0e-166 587.4 291 100.0
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 8.9e-69 264.6 278 54.3
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 5.7e-68 261.9 191 69.1
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 9.8e-68 261.2 203 63.5
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 4.9e-67 258.8 192 67.2
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 9.2e-66 254.6 274 51.5
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 1.0e-64 251.1 255 52.5
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 2.3e-64 250.0 267 53.9
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 2.3e-64 250.0 275 49.8
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 3.9e-64 249.2 284 49.6
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 3.9e-64 249.2 247 53.8
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 3.9e-64 249.2 274 51.5
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 5.0e-64 248.8 277 49.1
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 6.6e-64 248.4 269 52.8
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 6.6e-64 248.4 264 53.4
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 8.6e-64 248.1 262 51.1
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 8.6e-64 248.1 203 60.1
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 1.1e-63 247.7 256 51.2
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 2.5e-63 246.5 278 48.2
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 3.3e-63 246.1 270 50.7
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 1.2e-62 244.2 253 53.4
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 1.2e-62 244.2 250 51.6
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 1.6e-62 243.8 189 60.8
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 2.1e-62 243.4 199 61.3
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 2.1e-62 243.4 279 48.0
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 2.1e-62 243.4 167 70.7
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 2.8e-62 243.0 274 50.0
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 3.6e-62 242.7 245 53.9
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 6.1e-62 241.9 260 50.8
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 6.1e-62 241.9 241 54.4
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 6.1e-62 241.9 253 51.0
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 6.1e-62 241.9 253 51.0
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.0e-61 241.1 189 60.8
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 1.4e-61 240.7 232 53.4
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.8e-61 240.4 191 62.8
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.8e-61 240.4 191 62.8
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 2.3e-61 240.0 258 51.6
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.3e-61 240.0 189 60.8
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 2.3e-61 240.0 282 49.6
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 3.1e-61 239.6 268 50.4
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 4.0e-61 239.2 279 47.7
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 4.0e-61 239.2 190 60.5
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 8.9e-61 238.0 189 61.4
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 2.0e-60 236.9 191 62.3
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 2.0e-60 236.9 195 60.0
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 2.0e-60 236.9 234 51.3
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.0e-60 236.9 283 48.1
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 3.4e-60 236.1 178 63.5
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 3.4e-60 236.1 279 47.3
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 5.8e-60 235.3 258 48.8
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 9.8e-60 234.6 187 61.5
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 9.8e-60 234.6 191 60.7
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 1.3e-59 234.2 194 61.3
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 2.9e-59 233.0 210 55.2
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 2.9e-59 233.0 259 49.0
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 4.9e-59 232.3 258 48.1
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 6.4e-59 231.9 194 60.8
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 1.4e-58 230.7 195 57.9
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 1.4e-58 230.7 247 51.0
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 2.4e-58 229.9 224 52.7
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 2.4e-58 229.9 191 58.6
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 3.2e-58 229.6 197 58.9
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 3.2e-58 229.6 191 58.6
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 4.1e-58 229.2 192 59.9
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 5.4e-58 228.8 194 60.3
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 7.0e-58 228.4 191 57.6
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 7.0e-58 228.4 206 55.3
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 7.0e-58 228.4 242 50.8
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 7.0e-58 228.4 218 54.1
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 9.2e-58 228.0 236 53.0
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 1.2e-57 227.6 191 58.1
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 1.6e-57 227.3 206 52.9
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 4.6e-57 225.7 191 57.1
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 6.0e-57 225.3 247 47.8
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 6.0e-57 225.3 191 56.5
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 1.0e-56 224.6 192 58.9
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 1.0e-56 224.6 191 59.2
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 3.0e-56 223.0 202 55.4
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 3.9e-56 222.6 191 57.6
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 3.9e-56 222.6 254 47.2
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 5.0e-56 222.2 242 47.5
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 8.6e-56 221.5 247 49.0
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 1.5e-55 220.7 191 58.6
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 1.9e-55 220.3 202 54.0
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 1.9e-55 220.3 194 57.7
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 5.6e-55 218.8 247 47.4
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 5.6e-55 218.8 257 47.9
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 3.1e-53 213.0 218 51.4
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 4.4e-52 209.1 202 56.4
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 7.5e-52 208.4 205 54.1
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 9.2e-50 201.4 173 57.8
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 1.9e-47 193.7 297 42.4
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 4.3e-47 192.6 151 62.9
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 4.3e-47 192.6 153 64.7
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 7.3e-47 191.8 145 64.1
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 2.1e-46 190.3 154 63.0
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.1e-46 190.3 158 60.8
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 4.7e-46 189.1 154 62.3
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 4.0e-45 186.0 156 60.9
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 4.0e-45 186.0 277 41.2
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 5.8e-44 182.2 257 39.7
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 9.9e-44 181.4 159 56.0
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 1.6e-41 174.1 174 54.0
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 2.7e-41 173.3 200 44.5
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 8.6e-40 168.3 122 67.2
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 9.6e-39 164.9 120 65.0
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 2.2e-35 153.7 114 66.7
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 8.4e-35 151.8 134 53.7
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 1.4e-34 151.0 164 52.4
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 7.8e-33 145.2 197 42.1
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.3e-30 137.9 154 49.4
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 3.4e-28 129.8 203 38.4
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.0e-24 118.2 194 36.1
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 1.0e-24 118.2 194 36.1
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 4.5e-20 102.8 123 42.3
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 1.9e-18 97.4 81 61.7
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 2.4e-18 97.1 151 41.7
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 2.7e-17 93.6 98 46.9
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 3.9e-16 89.7 148 38.5
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 1.9e-15 87.4 228 28.5
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 4.5e-12 76.3 100 48.0
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 2.2e-11 73.9 103 41.7


User provided reference genes

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