Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 1.0e-129 466.8 247 100.0
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 2.0e-66 256.5 247 59.1
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 2.5e-64 249.6 233 57.5
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 7.3e-64 248.1 214 59.3
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.2e-63 247.3 240 57.5
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 2.0e-61 240.0 233 54.5
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 2.6e-61 239.6 212 58.0
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.7e-60 236.9 245 53.5
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 2.9e-60 236.1 206 58.7
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 3.7e-60 235.7 222 55.4
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 6.4e-60 235.0 238 54.2
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 6.4e-60 235.0 207 59.4
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 8.3e-60 234.6 207 59.4
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 8.3e-60 234.6 231 53.7
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.1e-59 234.2 207 58.9
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 4.1e-59 232.3 233 54.1
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 9.2e-59 231.1 231 52.8
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 1.2e-58 230.7 199 57.3
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.6e-58 230.3 213 55.4
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.6e-58 230.3 233 54.1
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 2.7e-58 229.6 233 54.1
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 2.7e-58 229.6 244 51.6
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 2.7e-58 229.6 206 58.7
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.5e-58 229.2 213 55.4
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 3.5e-58 229.2 203 56.7
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 1.0e-57 227.6 239 51.0
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 1.0e-57 227.6 203 56.7
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 3.9e-57 225.7 212 55.2
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 3.9e-57 225.7 212 55.2
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.1e-56 224.2 249 50.6
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 2.5e-56 223.0 234 51.7
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 3.3e-56 222.6 207 53.6
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 1.6e-55 220.3 225 58.2
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 3.6e-55 219.2 206 55.8
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 3.6e-55 219.2 210 55.2
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 3.6e-55 219.2 223 51.6
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 4.7e-55 218.8 238 52.9
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 6.2e-55 218.4 221 51.6
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 8.1e-55 218.0 278 46.8
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 3.1e-54 216.1 207 53.6
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 3.1e-54 216.1 232 52.6
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 6.8e-54 214.9 260 48.1
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 8.9e-54 214.5 247 48.2
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.5e-53 213.8 239 53.1
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 3.4e-53 212.6 262 48.5
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 5.8e-53 211.8 187 58.8
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 5.8e-53 211.8 240 48.3
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 9.9e-53 211.1 243 49.4
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.7e-52 210.3 221 52.9
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.7e-52 210.3 179 57.5
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 2.2e-52 209.9 187 58.3
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 1.4e-51 207.2 243 49.8
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.9e-51 206.8 180 57.8
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 2.4e-51 206.5 226 51.3
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 3.2e-51 206.1 238 47.9
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 4.1e-51 205.7 187 57.2
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 7.1e-51 204.9 200 53.5
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 6.0e-50 201.8 242 48.3
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 1.7e-49 200.3 228 48.7
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 6.6e-49 198.4 194 56.2
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.2e-47 194.1 190 54.7
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.1e-46 191.0 207 45.9
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 8.9e-46 188.0 167 55.7
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 5.8e-45 185.3 189 51.3
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.7e-44 183.7 191 56.0
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 8.4e-44 181.4 208 45.7
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 8.4e-44 181.4 218 46.3
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.2e-42 177.6 148 59.5
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 4.6e-42 175.6 148 59.5
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 5.1e-41 172.2 154 57.1
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 7.3e-40 168.3 204 48.5
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 5.6e-32 142.1 109 61.5
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 2.8e-31 139.8 152 50.7
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.4e-30 137.5 206 41.7
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 4.2e-27 125.9 99 63.6
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 2.7e-26 123.2 131 50.4
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 1.0e-25 121.3 107 57.9
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 5.1e-25 119.0 147 46.9
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 2.8e-23 113.2 101 51.5
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 1.1e-22 111.3 95 55.8
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.7e-20 104.0 187 33.2
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 5.5e-19 99.0 206 29.1
HPP92_018219 Vanilla planifolia HOM05D007678 ORTHO05D009658 7.1e-19 98.6 53 98.1
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 3.0e-17 93.2 82 53.7
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 4.3e-16 89.4 200 27.0
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 1.5e-13 80.9 57 64.9
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 5.9e-13 79.0 78 47.4
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 6.1e-10 68.9 70 48.6
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 6.1e-10 68.9 79 49.4
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 2.2e-07 60.5 57 54.4
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 4.8e-07 59.3 63 54.0
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 6.9e-06 55.5 50 58.0


User provided reference genes

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