Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018201 Vanilla planifolia HOM05D004836 ORTHO05D005150 0.0e+00 2842.0 1471 100.0
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 8.2e-46 190.7 628 34.6
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 9.7e-39 167.2 621 32.9
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 7.0e-29 134.4 632 29.3
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 3.8e-27 128.6 644 28.1
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 1.2e-25 123.6 635 29.0
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 1.6e-25 123.2 661 27.5
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 6.1e-25 121.3 669 26.8
PGSC0003DMG400022276 Solanum tuberosum HOM05D004836 ORTHO05D005150 8.0e-25 120.9 720 25.7
FAN10G2990 Fragaria x ananassa HOM05D004836 ORTHO05D005150 4.0e-24 118.6 620 27.1
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.2e-23 117.1 637 28.4
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 1.2e-23 117.1 733 27.8
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 2.6e-23 115.9 720 25.7
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 9.8e-23 114.0 662 27.8
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 9.8e-23 114.0 701 26.2
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 9.8e-23 114.0 782 25.7
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 2.8e-22 112.5 618 28.0
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 2.8e-22 112.5 647 27.8
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 4.9e-22 111.7 625 27.0
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 6.3e-22 111.3 643 26.3
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 1.1e-21 110.5 657 27.2
CDE04G0223 Ceratophyllum demersum HOM05D000588 ORTHO05D005150 2.4e-21 109.4 643 26.4
HanXRQChr03g0074011 Helianthus annuus HOM05D004836 ORTHO05D005150 2.4e-21 109.4 651 28.7
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 2.4e-21 109.4 615 28.8
Os09g0477700 Oryza sativa ssp. japonica HOM05D028105 ORTHO05D005150 5.4e-21 108.2 391 32.2
Zm00001eb316050 Zea mays HOM05D028105 ORTHO05D005150 5.4e-21 108.2 617 26.9
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 9.1e-21 107.5 568 28.9
CsaV3_7G011380 Cucumis sativus L. HOM05D004836 ORTHO05D005150 4.5e-20 105.1 626 26.0
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 4.5e-20 105.1 624 26.9
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 5.9e-20 104.8 635 27.6
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 7.7e-20 104.4 616 26.3
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 7.7e-20 104.4 613 28.2
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 1.3e-19 103.6 613 28.2
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 1.3e-19 103.6 633 28.4
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 1.7e-19 103.2 630 26.5
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 8.6e-19 100.9 644 27.0
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 1.1e-18 100.5 625 26.2
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 1.1e-18 100.5 633 25.4
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 1.5e-18 100.1 619 26.8
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 2.5e-18 99.4 800 26.1
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 3.3e-18 99.0 630 27.9
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 9.5e-18 97.4 750 25.6
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 1.2e-17 97.1 632 26.3
Ciclev10007227m.g Citrus clementina HOM05D004836 ORTHO05D005150 2.1e-17 96.3 669 26.6
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.8e-17 95.9 634 26.3
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 3.6e-17 95.5 664 28.9
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 1.4e-16 93.6 626 26.0
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 5.2e-16 91.7 592 29.1
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 5.2e-16 91.7 546 25.5
Hund23108 Selenicereus undatus HOM05D004836 ORTHO05D005150 5.7e-15 88.2 605 25.3
CSS0003147 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 7.5e-15 87.8 360 30.8
TWI39G0854 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 9.8e-15 87.4 470 27.9
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 2.2e-14 86.3 630 26.0
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 8.3e-14 84.3 578 24.9
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 1.4e-13 83.6 640 23.4
ATR0751G141 Amborella trichopoda HOM05D004836 ORTHO05D005150 1.8e-13 83.2 412 30.8
Phvul.003G265300 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 4.1e-13 82.0 755 22.4
Glyma.10G277400 Glycine max HOM05D004836 ORTHO05D005150 7.0e-13 81.3 464 24.1
ClCG09G021380 Citrullus lanatus HOM05D004836 ORTHO05D005150 1.2e-12 80.5 632 24.8
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 1.6e-12 80.1 628 25.0
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 2.0e-12 79.7 633 26.1
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 2.7e-12 79.3 687 25.8
AUR62017108 Chenopodium quinoa HOM05D004836 ORTHO05D005150 5.9e-12 78.2 244 34.8
AUR62036461 Chenopodium quinoa HOM05D004836 ORTHO05D005150 7.8e-12 77.8 257 34.2
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 1.7e-11 76.6 421 27.3
Lj5g0000015 Lotus japonicus HOM05D004836 ORTHO05D005150 1.7e-11 76.6 497 26.6
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 2.3e-11 76.3 643 24.7
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 5.0e-11 75.1 357 30.3
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 5.0e-11 75.1 627 24.6
Ah.06g181450 Amaranthus hybridus HOM05D004836 ORTHO05D005150 6.6e-11 74.7 298 30.5
Lalb_Chr06g0166281 Lupinus albus HOM05D004836 ORTHO05D005150 1.1e-10 73.9 614 25.4
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 3.3e-10 72.4 655 24.0
Glyma.20G112200 Glycine max HOM05D004836 ORTHO05D005150 4.3e-10 72.0 462 23.8
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 4.3e-10 72.0 626 24.3
Hund20644 Selenicereus undatus HOM05D004836 ORTHO05D005150 4.3e-10 72.0 616 24.2
MELO3C024947.2 Cucumis melo HOM05D004836 ORTHO05D005150 5.6e-10 71.6 687 24.7
EL10Ac4g07562 Beta vulgaris HOM05D004836 ORTHO05D005150 9.5e-10 70.9 651 24.9
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 1.6e-09 70.1 636 24.7
Sed0003689 Sechium edule HOM05D004836 ORTHO05D005150 1.6e-09 70.1 609 26.3
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 2.1e-09 69.7 563 25.6
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 2.1e-09 69.7 776 24.7
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 2.8e-09 69.3 617 25.4
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 4.7e-09 68.6 456 24.6
Os08g0491100 Oryza sativa ssp. japonica HOM05D028105 ORTHO05D005150 8.0e-09 67.8 77 48.1
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 1.0e-08 67.4 889 23.2
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.0e-08 67.4 763 25.8
CBR_g22984 Chara braunii HOM05D014698 ORTHO05D016532 2.3e-08 66.2 90 41.1
Rhsim04G0012500 Rhododendron simsii HOM05D004836 ORTHO05D005150 4.0e-08 65.5 292 31.8
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 1.2e-07 63.9 694 23.6
MD00G1168400 Malus domestica HOM05D004836 ORTHO05D005150 2.6e-07 62.8 484 25.4
VMungo0720G3177 Vigna mungo HOM05D004836 ORTHO05D005150 2.6e-07 62.8 435 23.9
Actinidia30399 Actinidia chinensis HOM05D004836 ORTHO05D005150 3.4e-07 62.4 96 39.6
SEGI_04158 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 4.4e-07 62.0 78 42.3
TPR.G26295 Trifolium pratense HOM05D004836 ORTHO05D005150 4.4e-07 62.0 120 32.5
Gohir.A01G091700 Gossypium hirsutum HOM05D004836 ORTHO05D005150 5.8e-07 61.6 789 25.5
unitig_22.g5946 Utricularia gibba HOM05D004836 ORTHO05D005150 5.8e-07 61.6 455 26.6
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 9.8e-07 60.8 611 23.6
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 2.2e-06 59.7 258 31.4
Gohir.D13G135900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 2.2e-06 59.7 486 27.2


User provided reference genes

Program Settings