Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018138 Vanilla planifolia HOM05D000425 ORTHO05D430238 3.6e-48 194.5 94 100.0
MSTRG.23933 Avicennia marina HOM05D000425 ORTHO05D000373 1.7e-08 62.8 95 37.9
PGSC0003DMG400029867 Solanum tuberosum HOM05D000425 ORTHO05D000373 1.1e-07 60.1 52 46.2
Cc07_g03420 Coffea canephora HOM05D000425 ORTHO05D000373 1.4e-07 59.7 93 36.6
Os12g0574000 Oryza sativa ssp. japonica HOM05D000425 ORTHO05D000373 3.1e-07 58.5 54 48.1
Aqoxy2G02278 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 5.3e-07 57.8 50 50.0
Aqoxy2G02283 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 5.3e-07 57.8 52 48.1
Nn2g11172 Nelumbo nucifera HOM05D000425 ORTHO05D000373 5.3e-07 57.8 53 49.1
VMungo1383G1112 Vigna mungo HOM05D000425 ORTHO05D000373 5.3e-07 57.8 95 33.7
Aqoxy3G00638 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 6.9e-07 57.4 93 34.4
Oeu011857.1 Olea europaea HOM05D000425 ORTHO05D000373 6.9e-07 57.4 85 34.1
PGSC0003DMG400003397 Solanum tuberosum HOM05D000425 ORTHO05D000373 6.9e-07 57.4 52 44.2
arahy.Tifrunner.gnm1.ann1.8P27J6 Arachis hypogaea HOM05D000425 ORTHO05D000373 9.1e-07 57.0 84 36.9
arahy.Tifrunner.gnm1.ann1.D3GUP4 Arachis hypogaea HOM05D000425 ORTHO05D000373 9.1e-07 57.0 84 36.9
arahy.Tifrunner.gnm1.ann1.DAK0DB Arachis hypogaea HOM05D000425 ORTHO05D000373 9.1e-07 57.0 84 36.9
arahy.Tifrunner.gnm1.ann1.N7480N Arachis hypogaea HOM05D000425 ORTHO05D000373 9.1e-07 57.0 84 36.9
SMO334G0096 Selaginella moellendorffii HOM05D000425 ORTHO05D000373 9.1e-07 57.0 53 45.3
Solyc03g013160.4 Solanum lycopersicum HOM05D000425 ORTHO05D000373 9.1e-07 57.0 50 46.0
Aqoxy2G03543 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 1.2e-06 56.6 93 32.3
Aqoxy5G02904 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 1.2e-06 56.6 93 32.3
CARHR262500 Cardamine hirsuta HOM05D000425 ORTHO05D000373 1.2e-06 56.6 93 33.3
Oeu035696.1 Olea europaea HOM05D000425 ORTHO05D000373 1.2e-06 56.6 95 33.7
Rhsim10G0038900 Rhododendron simsii HOM05D000425 ORTHO05D000373 1.2e-06 56.6 93 35.5
SalBow1G0385 Salvia bowleyana HOM05D000425 ORTHO05D000373 1.2e-06 56.6 53 47.2
SalBow1G7723 Salvia bowleyana HOM05D000425 ORTHO05D000373 1.2e-06 56.6 53 47.2
Zm00001eb136330 Zea mays HOM05D000425 ORTHO05D000373 1.2e-06 56.6 54 48.1
MELO3C019816.2 Cucumis melo HOM05D000425 ORTHO05D000373 1.5e-06 56.2 50 50.0
Duzib251G0744 Durio zibethinus HOM05D000425 ORTHO05D000373 1.5e-06 56.2 53 45.3
SGA_v2.0_scaffold499G52484 Striga asiatica HOM05D000425 ORTHO05D000373 1.5e-06 56.2 85 34.1
Aqoxy1G00896 Aquilegia oxysepala HOM05D000425 ORTHO05D000373 2.0e-06 55.8 53 49.1
MSTRG.23934 Avicennia marina HOM05D000425 ORTHO05D000373 2.0e-06 55.8 53 47.2
Peaxi162Scf00451g00723 Petunia axillaris HOM05D000425 ORTHO05D000373 2.0e-06 55.8 52 42.3
Rhsim09G0149600 Rhododendron simsii HOM05D000425 ORTHO05D000373 2.0e-06 55.8 50 48.0
SalBow6G6291 Salvia bowleyana HOM05D000425 ORTHO05D000373 2.0e-06 55.8 53 43.4
DCAR_020571 Daucus carota HOM05D000425 ORTHO05D000373 2.6e-06 55.5 53 45.3
Hma1.2p1_0156F.1_g068680 Hydrangea macrophylla HOM05D000425 ORTHO05D000373 2.6e-06 55.5 93 38.7
Hma1.2p1_1495F.1_g286980 Hydrangea macrophylla HOM05D000425 ORTHO05D000373 2.6e-06 55.5 93 38.7
Nitab4.5_0000118g0110 Nicotiana tabacum HOM05D000425 ORTHO05D000373 2.6e-06 55.5 50 44.0
PSO063G4462 Papaver somniferum HOM05D000425 ORTHO05D000373 2.6e-06 55.5 53 45.3
Peaxi162Scf00377g00919 Petunia axillaris HOM05D000425 ORTHO05D000373 2.6e-06 55.5 52 46.2
HPP92_013047 Vanilla planifolia HOM05D000425 ORTHO05D000373 2.6e-06 55.5 53 41.5
CSS0026804 Camellia sinensis var. sinensis HOM05D000425 ORTHO05D000373 3.4e-06 55.1 53 45.3
Zm00001eb029450 Zea mays HOM05D000425 ORTHO05D000373 3.4e-06 55.1 54 48.1
ClCG10G016200 Citrullus lanatus HOM05D000425 ORTHO05D000373 4.5e-06 54.7 53 43.4
Potri.010G169000 Populus trichocarpa HOM05D000425 ORTHO05D000373 4.5e-06 54.7 52 44.2
TAR625G0553 Trochodendron aralioides HOM05D000425 ORTHO05D000373 4.5e-06 54.7 53 45.3
TAR633G1710 Trochodendron aralioides HOM05D000425 ORTHO05D000373 4.5e-06 54.7 53 45.3
Ciclev10031131m.g Citrus clementina HOM05D000425 ORTHO05D000373 5.9e-06 54.3 52 46.2
Eucgr.A02246 Eucalyptus grandis HOM05D000425 ORTHO05D000373 5.9e-06 54.3 52 44.2
Lj2C398T10 Lonicera japonica HOM05D000425 ORTHO05D000373 5.9e-06 54.3 53 41.5
PSO017G5991 Papaver somniferum HOM05D000425 ORTHO05D000373 5.9e-06 54.3 54 40.7
PSO478G2877 Papaver somniferum HOM05D000425 ORTHO05D000373 5.9e-06 54.3 54 40.7
Potri.008G086500 Populus trichocarpa HOM05D000425 ORTHO05D000373 5.9e-06 54.3 52 42.3
Sc14g0008120 Simmondsia chinensis HOM05D000425 ORTHO05D000373 5.9e-06 54.3 53 39.6
Zm00001eb192710 Zea mays HOM05D000425 ORTHO05D000373 5.9e-06 54.3 53 41.5
ClCG08G007640 Citrullus lanatus HOM05D000425 ORTHO05D000373 7.7e-06 53.9 50 48.0
CsaV3_6G036610 Cucumis sativus L. HOM05D000425 ORTHO05D000373 7.7e-06 53.9 50 48.0
Nn3g17247 Nelumbo nucifera HOM05D000425 ORTHO05D000373 7.7e-06 53.9 53 43.4


User provided reference genes

Program Settings