Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 2.9e-171 605.1 307 100.0
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 1.0e-70 271.2 303 50.5
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 1.0e-67 261.2 301 52.8
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 5.1e-67 258.8 298 51.0
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 6.7e-67 258.5 293 53.6
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 1.5e-66 257.3 295 52.9
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 1.5e-66 257.3 293 49.8
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.5e-66 257.3 302 50.0
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 2.5e-66 256.5 297 48.5
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 3.3e-66 256.1 271 53.9
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 8.2e-65 251.5 274 54.4
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 1.1e-64 251.1 279 51.3
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 1.4e-64 250.8 302 49.7
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 1.8e-64 250.4 289 50.5
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 1.8e-64 250.4 271 52.8
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 7.7e-63 245.0 287 51.2
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 7.7e-63 245.0 308 49.4
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.0e-62 244.6 294 49.0
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 1.0e-62 244.6 274 51.5
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 1.7e-62 243.8 287 49.1
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 1.7e-62 243.8 271 50.6
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 3.8e-62 242.7 292 50.0
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 3.8e-62 242.7 314 46.8
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 5.0e-62 242.3 276 51.4
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 6.5e-62 241.9 294 49.0
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 8.5e-62 241.5 275 50.5
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 8.5e-62 241.5 297 52.2
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 8.5e-62 241.5 280 49.3
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 1.9e-61 240.4 294 48.6
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 1.9e-61 240.4 292 52.4
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 3.2e-61 239.6 294 48.3
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 5.5e-61 238.8 273 53.1
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 1.2e-60 237.7 278 50.0
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 1.6e-60 237.3 275 50.9
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 1.6e-60 237.3 288 51.0
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 2.1e-60 236.9 288 51.0
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 2.1e-60 236.9 286 48.6
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 3.6e-60 236.1 272 52.2
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 4.6e-60 235.7 297 47.8
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 4.6e-60 235.7 302 48.0
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 4.6e-60 235.7 273 50.9
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 6.1e-60 235.3 298 49.7
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 6.1e-60 235.3 287 48.8
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 7.9e-60 235.0 299 48.5
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 1.0e-59 234.6 278 51.8
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 1.4e-59 234.2 288 48.6
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 2.3e-59 233.4 300 45.7
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 3.0e-59 233.0 276 48.2
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 6.7e-59 231.9 275 48.4
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 6.7e-59 231.9 294 49.0
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 6.7e-59 231.9 299 45.2
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 6.7e-59 231.9 278 49.3
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 6.7e-59 231.9 310 45.5
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.5e-58 230.7 340 45.6
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 2.0e-58 230.3 295 50.5
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 3.3e-58 229.6 289 48.8
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 3.3e-58 229.6 291 47.8
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 4.4e-58 229.2 274 49.3
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 4.4e-58 229.2 288 47.2
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 9.7e-58 228.0 287 45.6
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 9.7e-58 228.0 290 48.3
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 9.7e-58 228.0 287 47.7
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 1.3e-57 227.6 290 47.9
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 1.3e-57 227.6 274 48.9
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 1.7e-57 227.3 273 50.5
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 2.2e-57 226.9 315 43.5
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 3.7e-57 226.1 286 47.6
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 6.3e-57 225.3 302 46.0
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 1.1e-56 224.6 277 44.8
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 3.1e-56 223.0 287 44.6
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 3.1e-56 223.0 297 48.1
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 3.1e-56 223.0 277 45.1
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 4.1e-56 222.6 294 44.6
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 9.1e-56 221.5 287 44.3
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 9.1e-56 221.5 303 45.2
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 9.1e-56 221.5 297 49.5
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 9.1e-56 221.5 308 46.8
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 1.2e-55 221.1 294 44.9
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 1.2e-55 221.1 294 46.3
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 2.0e-55 220.3 293 44.4
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 2.0e-55 220.3 315 42.9
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 2.0e-55 220.3 294 44.9
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 7.7e-55 218.4 324 42.9
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.2e-54 216.9 299 43.5
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 1.4e-53 214.2 306 44.1
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 1.9e-53 213.8 302 43.7
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 2.5e-53 213.4 286 44.4
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 2.5e-53 213.4 286 44.4
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 2.5e-53 213.4 286 44.4
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 3.2e-53 213.0 299 45.2
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 4.2e-53 212.6 291 43.3
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 5.5e-53 212.2 318 41.8
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 1.2e-52 211.1 296 44.9
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 2.1e-52 210.3 290 43.4
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 2.7e-52 209.9 286 43.0
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 2.7e-52 209.9 286 43.0
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 4.7e-52 209.1 289 43.9
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 4.7e-52 209.1 293 43.7
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 4.7e-52 209.1 261 47.5
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 4.7e-52 209.1 285 45.6
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 3.9e-51 206.1 306 44.1
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 6.7e-51 205.3 316 41.1
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.1e-50 204.5 287 44.9
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 9.7e-50 201.4 286 43.4
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 6.3e-49 198.7 292 42.8
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 1.1e-48 198.0 296 43.2
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 2.0e-47 193.7 315 40.3
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 2.2e-46 190.3 293 42.7
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.9e-45 187.2 306 42.8
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 2.5e-45 186.8 297 40.7
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 3.2e-45 186.4 267 45.3
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 3.6e-44 183.0 245 44.9
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 4.7e-44 182.6 280 42.9
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 6.7e-43 178.7 297 40.1
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.3e-41 174.5 275 42.2
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 1.4e-40 171.0 287 43.9
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 3.1e-40 169.9 279 41.6
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 5.9e-39 165.6 317 34.7
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 1.9e-37 160.6 110 68.2
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 1.6e-36 157.5 291 36.8
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 3.6e-36 156.4 293 41.3
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 6.1e-36 155.6 219 44.7
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 6.8e-35 152.1 120 62.5
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 1.8e-32 144.1 239 39.7
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 3.1e-32 143.3 280 35.0
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 9.1e-32 141.7 240 39.2
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.3e-30 137.9 249 38.6
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.3e-30 137.9 249 38.6
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.2e-30 137.1 239 38.5
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 2.8e-28 130.2 293 36.9
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 1.5e-26 124.4 265 35.1
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 3.4e-26 123.2 288 30.9
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 1.4e-24 117.9 271 35.8
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 3.8e-22 109.8 94 54.3
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 1.9e-21 107.5 64 76.6
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 9.5e-21 105.1 221 35.3
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 2.3e-19 100.5 185 37.8
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 6.8e-19 99.0 250 32.0
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 1.5e-18 97.8 186 40.9
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 3.4e-18 96.7 117 43.6
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 1.3e-17 94.7 148 44.6
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 5.6e-13 79.3 59 52.5
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 6.2e-12 75.9 140 37.1


User provided reference genes

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