Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.5e-112 409.5 199 100.0
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.6e-90 336.3 163 98.8
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 1.1e-59 233.8 163 68.7
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 2.0e-59 233.0 163 66.3
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 3.7e-58 228.8 182 59.3
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 6.3e-58 228.0 159 65.4
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 9.1e-57 224.2 161 64.6
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 5.9e-56 221.5 159 62.9
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.0e-55 220.7 182 56.0
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.0e-55 220.7 194 55.2
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.0e-55 220.7 192 55.2
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.3e-55 220.3 192 55.2
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 1.7e-55 219.9 186 56.5
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 1.7e-55 219.9 186 56.5
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.2e-55 219.5 180 57.8
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 2.2e-55 219.5 185 53.5
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 2.2e-55 219.5 194 55.2
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 2.2e-55 219.5 194 55.2
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 2.9e-55 219.2 182 55.5
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 3.8e-55 218.8 160 63.1
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 1.1e-54 217.2 175 58.9
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 1.4e-54 216.9 159 64.2
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 1.4e-54 216.9 159 64.2
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.9e-54 216.5 159 65.4
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.9e-54 216.5 160 62.5
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 1.9e-54 216.5 159 61.6
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.9e-54 216.5 156 66.0
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 1.9e-54 216.5 159 64.2
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 1.9e-54 216.5 159 64.2
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 2.5e-54 216.1 159 62.9
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 3.2e-54 215.7 180 56.7
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.2e-54 215.7 183 56.8
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 4.2e-54 215.3 192 54.7
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 5.5e-54 214.9 159 63.5
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 1.2e-53 213.8 199 52.8
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.2e-53 213.8 192 53.1
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.2e-53 213.8 194 53.6
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.6e-53 213.4 158 62.7
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 2.7e-53 212.6 191 53.9
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 3.6e-53 212.2 156 62.8
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 7.9e-53 211.1 159 63.5
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 1.4e-52 210.3 163 60.1
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 1.4e-52 210.3 169 59.8
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 1.8e-52 209.9 196 50.0
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 3.0e-52 209.1 157 64.3
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 3.9e-52 208.8 175 58.3
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 1.1e-51 207.2 182 53.8
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 2.0e-51 206.5 157 62.4
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 2.6e-51 206.1 157 61.8
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 7.4e-51 204.5 157 59.9
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 9.7e-51 204.1 182 53.3
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 1.3e-50 203.8 191 53.9
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 2.2e-50 203.0 182 54.4
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 2.2e-50 203.0 182 54.9
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 4.8e-50 201.8 182 53.3
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 1.1e-49 200.7 158 60.8
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 1.8e-49 199.9 164 55.5
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 3.1e-49 199.1 182 54.4
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 5.3e-49 198.4 158 59.5
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 9.1e-49 197.6 157 61.1
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 9.1e-49 197.6 157 61.1
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 9.1e-49 197.6 182 51.1
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 1.2e-48 197.2 182 53.8
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 1.2e-48 197.2 182 55.5
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 1.6e-48 196.8 158 58.9
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 2.0e-48 196.4 163 57.1
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 2.6e-48 196.1 174 55.7
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 3.5e-48 195.7 143 65.7
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 3.5e-48 195.7 160 56.9
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 5.9e-48 194.9 160 60.6
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 1.0e-47 194.1 164 54.3
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.0e-47 194.1 177 54.8
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 1.0e-47 194.1 158 59.5
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.3e-47 193.7 160 60.0
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 1.7e-47 193.4 157 58.0
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 1.7e-47 193.4 183 53.6
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 2.2e-47 193.0 157 57.3
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.2e-47 193.0 177 54.8
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 2.9e-47 192.6 157 57.3
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 2.9e-47 192.6 183 52.5
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 3.8e-47 192.2 194 51.0
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 5.0e-47 191.8 160 59.4
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 6.5e-47 191.4 160 55.6
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 1.1e-46 190.7 184 51.6
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 1.5e-46 190.3 160 59.4
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 1.9e-46 189.9 160 56.9
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 2.5e-46 189.5 157 57.3
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 2.5e-46 189.5 194 50.0
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 4.2e-46 188.7 189 46.6
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 5.5e-46 188.3 160 56.9
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 7.2e-46 188.0 160 56.9
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 7.2e-46 188.0 160 56.9
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 9.4e-46 187.6 191 47.1
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 1.2e-45 187.2 182 48.4
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 4.7e-45 185.3 160 55.6
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 4.7e-45 185.3 160 55.6
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 8.0e-45 184.5 160 56.2
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 1.0e-44 184.1 160 56.2
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 1.0e-44 184.1 183 50.3
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 2.3e-44 183.0 160 55.6
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 2.3e-44 183.0 160 55.6
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 2.3e-44 183.0 160 55.6
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 5.2e-44 181.8 182 48.9
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 6.7e-44 181.4 137 65.0
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 1.2e-43 180.6 193 48.7
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 5.7e-43 178.3 131 61.8
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 1.6e-40 170.2 184 51.6
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 2.0e-40 169.9 184 52.2
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.7e-40 169.5 184 52.2
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 5.9e-40 168.3 184 51.6
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 1.7e-39 166.8 134 59.7
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 6.5e-39 164.9 183 50.8
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.9e-38 163.3 131 56.5
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 7.2e-38 161.4 108 66.7
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 2.7e-37 159.5 157 52.9
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 6.1e-37 158.3 129 56.6
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 1.4e-36 157.1 263 37.6
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 2.0e-35 153.3 149 49.7
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 3.5e-32 142.5 157 49.0
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 2.9e-31 139.4 153 41.8
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 6.3e-26 121.7 148 40.5
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 4.3e-22 109.0 79 62.0
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 8.0e-21 104.8 135 40.7
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 7.3e-14 81.6 65 64.6


User provided reference genes

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