Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017993 Vanilla planifolia HOM05D006992 ORTHO05D008752 3.8e-114 414.8 206 100.0
HPP92_026697 Vanilla planifolia HOM05D006992 ORTHO05D008752 6.2e-109 397.5 206 96.6
Os06g0298500 Oryza sativa ssp. japonica HOM05D006992 ORTHO05D008752 8.8e-63 244.2 186 64.5
ATR0706G207 Amborella trichopoda HOM05D006992 ORTHO05D008752 3.4e-59 232.3 204 58.3
Eucgr.B01740 Eucalyptus grandis HOM05D006992 ORTHO05D008752 2.9e-58 229.2 188 60.6
Potri.013G034100 Populus trichocarpa HOM05D006992 ORTHO05D008752 8.5e-58 227.6 185 61.1
Cc02_g31290 Coffea canephora HOM05D006992 ORTHO05D008752 4.2e-57 225.3 174 62.6
Nn3g21348 Nelumbo nucifera HOM05D006992 ORTHO05D008752 7.2e-57 224.6 197 58.4
Oeu012474.1 Olea europaea HOM05D006992 ORTHO05D008752 1.2e-56 223.8 196 60.2
Sc09g0003710 Simmondsia chinensis HOM05D006992 ORTHO05D008752 1.2e-56 223.8 218 52.8
CSS0031345 Camellia sinensis var. sinensis HOM05D006992 ORTHO05D008752 2.1e-56 223.0 187 58.3
TAR633G1762 Trochodendron aralioides HOM05D006992 ORTHO05D008752 3.6e-56 222.2 187 59.4
Zm00001eb381040 Zea mays HOM05D006992 ORTHO05D008752 3.6e-56 222.2 185 61.1
MD12G1234200 Malus domestica HOM05D006992 ORTHO05D008752 4.7e-56 221.9 192 57.3
CiPaw.07G008900 Carya illinoinensis HOM05D006992 ORTHO05D008752 1.0e-55 220.7 188 57.4
ClCG03G016340 Citrullus lanatus HOM05D006992 ORTHO05D008752 1.4e-55 220.3 196 56.6
CAN.G424.13 Capsicum annuum HOM05D006992 ORTHO05D008752 1.8e-55 219.9 186 58.1
TWI36G0139 Tripterygium wilfordii HOM05D006992 ORTHO05D008752 1.8e-55 219.9 201 57.2
Prupe.6G337300 Prunus persica HOM05D006992 ORTHO05D008752 2.3e-55 219.5 198 54.5
Ciclev10002483m.g Citrus clementina HOM05D006992 ORTHO05D008752 3.9e-55 218.8 191 57.6
CDE02G3150 Ceratophyllum demersum HOM05D006992 ORTHO05D008752 5.2e-55 218.4 187 59.4
CiPaw.08G178000 Carya illinoinensis HOM05D006992 ORTHO05D008752 6.7e-55 218.0 188 55.9
SalBow3G4063 Salvia bowleyana HOM05D006992 ORTHO05D008752 6.7e-55 218.0 216 53.7
Migut.N01946 Erythranthe guttata HOM05D006992 ORTHO05D008752 8.8e-55 217.6 194 57.2
Nitab4.5_0001410g0140 Nicotiana tabacum HOM05D006992 ORTHO05D008752 1.1e-54 217.2 186 58.6
FvH4_6g03930 Fragaria vesca HOM05D006992 ORTHO05D008752 1.5e-54 216.9 193 57.0
CANSAT54G1892 Cannabis sativa HOM05D006992 ORTHO05D008752 2.6e-54 216.1 192 55.2
Sed0003148 Sechium edule HOM05D006992 ORTHO05D008752 2.6e-54 216.1 188 59.0
Hund06999 Selenicereus undatus HOM05D006992 ORTHO05D008752 2.6e-54 216.1 202 55.9
Glyma.19G241400 Glycine max HOM05D006992 ORTHO05D008752 3.3e-54 215.7 188 56.4
CsaV3_1G039620 Cucumis sativus L. HOM05D006992 ORTHO05D008752 4.4e-54 215.3 196 56.1
Phvul.006G097900 Phaseolus vulgaris HOM05D006992 ORTHO05D008752 4.4e-54 215.3 191 56.0
RcHm_v2.0_Chr3g0452481 Rosa chinensis HOM05D006992 ORTHO05D008752 4.4e-54 215.3 192 55.7
AUR62000954 Chenopodium quinoa HOM05D006992 ORTHO05D008752 7.4e-54 214.5 197 56.9
Manes.09G157800 Manihot esculenta HOM05D006992 ORTHO05D008752 7.4e-54 214.5 202 54.0
QL03p000176 Quercus lobata HOM05D006992 ORTHO05D008752 7.4e-54 214.5 193 56.0
Lj1g0025869 Lotus japonicus HOM05D006992 ORTHO05D008752 9.7e-54 214.2 195 55.4
PSO210G3204 Papaver somniferum HOM05D006992 ORTHO05D008752 9.7e-54 214.2 189 58.2
PSO832G0773 Papaver somniferum HOM05D006992 ORTHO05D008752 9.7e-54 214.2 189 58.2
Solyc02g079130.3 Solanum lycopersicum HOM05D006992 ORTHO05D008752 9.7e-54 214.2 189 55.6
Atru.chr2.657 Acer truncatum HOM05D006992 ORTHO05D008752 1.3e-53 213.8 190 55.3
Sopen02g023930 Solanum pennellii HOM05D006992 ORTHO05D008752 1.3e-53 213.8 189 55.6
Actinidia33837 Actinidia chinensis HOM05D006992 ORTHO05D008752 1.7e-53 213.4 192 56.2
MELO3C015384.2 Cucumis melo HOM05D006992 ORTHO05D008752 1.7e-53 213.4 196 55.1
Nitab4.5_0004284g0080 Nicotiana tabacum HOM05D006992 ORTHO05D008752 2.2e-53 213.0 186 57.5
arahy.Tifrunner.gnm1.ann1.ZZK2AU Arachis hypogaea HOM05D006992 ORTHO05D008752 3.7e-53 212.2 208 56.2
PGSC0003DMG400022358 Solanum tuberosum HOM05D006992 ORTHO05D008752 4.8e-53 211.8 189 55.6
THA.LOC104818652 Tarenaya hassleriana HOM05D006992 ORTHO05D008752 4.8e-53 211.8 193 54.4
HanXRQChr14g0445751 Helianthus annuus HOM05D006992 ORTHO05D008752 6.3e-53 211.5 187 54.5
Cfa006481 Carpinus fangiana HOM05D006992 ORTHO05D008752 8.2e-53 211.1 194 55.2
Sabra13G0033300 Salix brachista HOM05D006992 ORTHO05D008752 8.2e-53 211.1 182 57.1
FAN09G1577 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.1e-52 210.7 194 56.2
vmacro19674 Vaccinium macrocarpon HOM05D006992 ORTHO05D008752 1.1e-52 210.7 186 58.1
EL10Ac4g09207 Beta vulgaris HOM05D006992 ORTHO05D008752 1.4e-52 210.3 189 57.1
AL3G15290 Arabidopsis lyrata HOM05D006992 ORTHO05D008752 1.8e-52 209.9 193 53.9
Thecc.05G291400 Theobroma cacao HOM05D006992 ORTHO05D008752 2.4e-52 209.5 213 53.1
FAN14G0596 Fragaria x ananassa HOM05D006992 ORTHO05D008752 3.1e-52 209.1 193 56.5
Lsat_1_v5_gn_2_67081 Lactuca sativa HOM05D006992 ORTHO05D008752 3.1e-52 209.1 187 54.0
DCAR_022834 Daucus carota HOM05D006992 ORTHO05D008752 4.1e-52 208.8 185 58.4
ECA238G1326 Erigeron canadensis HOM05D006992 ORTHO05D008752 4.1e-52 208.8 175 58.3
Gohir.A13G106100 Gossypium hirsutum HOM05D006992 ORTHO05D008752 4.1e-52 208.8 188 54.8
PGR083G1999 Punica granatum HOM05D006992 ORTHO05D008752 4.1e-52 208.8 191 54.5
Carub.0003s0417 Capsella rubella HOM05D006992 ORTHO05D008752 5.3e-52 208.4 193 53.9
TPR.G6916 Trifolium pratense HOM05D006992 ORTHO05D008752 5.3e-52 208.4 191 54.5
Migut.N01944 Erythranthe guttata HOM05D006992 ORTHO05D008752 7.0e-52 208.0 184 57.1
Thhalv10021439m.g Eutrema salsugineum HOM05D006992 ORTHO05D008752 9.1e-52 207.6 193 53.4
Rhsim05G0148900 Rhododendron simsii HOM05D006992 ORTHO05D008752 9.1e-52 207.6 186 56.5
FAN05G0877 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.2e-51 207.2 194 55.7
Gorai.013G122400 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.2e-51 207.2 188 54.3
CARHR079260 Cardamine hirsuta HOM05D006992 ORTHO05D008752 1.6e-51 206.8 193 52.8
Gohir.D13G108900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.6e-51 206.8 188 54.3
SGA_v2.0_scaffold80G25908 Striga asiatica HOM05D006992 ORTHO05D008752 1.6e-51 206.8 188 55.9
AT3G04950 Arabidopsis thaliana HOM05D006992 ORTHO05D008752 2.0e-51 206.5 189 53.4
Lalb_Chr18g0045231 Lupinus albus HOM05D006992 ORTHO05D008752 2.0e-51 206.5 210 50.0
QL03p000513 Quercus lobata HOM05D006992 ORTHO05D008752 5.9e-51 204.9 220 49.5
Psat0s2796g0040 Pisum sativum HOM05D006992 ORTHO05D008752 7.7e-51 204.5 191 52.9
BcaB04g19286 Brassica carinata HOM05D006992 ORTHO05D008752 1.0e-50 204.1 193 52.3
Ca_09397_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 1.0e-50 204.1 193 51.3
arahy.Tifrunner.gnm1.ann1.26USVU Arachis hypogaea HOM05D006992 ORTHO05D008752 1.3e-50 203.8 204 55.4
Peaxi162Scf00103g00035 Petunia axillaris HOM05D006992 ORTHO05D008752 1.3e-50 203.8 175 53.1
FAN05G5181 Fragaria x ananassa HOM05D006992 ORTHO05D008752 2.2e-50 203.0 189 55.6
BcaC01g04339 Brassica carinata HOM05D006992 ORTHO05D008752 3.8e-50 202.2 189 52.4
Medtr7g114390 Medicago truncatula HOM05D006992 ORTHO05D008752 3.8e-50 202.2 186 52.7
Sp3g03770 Schrenkiella parvula HOM05D006992 ORTHO05D008752 6.5e-50 201.4 191 51.8
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 1.1e-49 200.7 198 52.0
GSVIVG01021889001 Vitis vinifera HOM05D006992 ORTHO05D008752 1.1e-49 200.7 173 55.5
Gohir.A11G256900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 3.2e-49 199.1 175 54.3
BraA03t12570Z Brassica rapa HOM05D006992 ORTHO05D008752 4.2e-49 198.7 190 52.6
FAN02G1922 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.2e-48 197.2 194 53.6
AUR62005014 Chenopodium quinoa HOM05D006992 ORTHO05D008752 4.7e-48 195.3 188 54.8
Gorai.007G286500 Gossypium raimondii HOM05D006992 ORTHO05D008752 4.7e-48 195.3 188 52.1
BolC3t16415H Brassica oleracea HOM05D006992 ORTHO05D008752 6.1e-48 194.9 186 52.2
A03p33950 Brassica napus HOM05D003164 ORTHO05D003575 8.0e-48 194.5 189 51.9
unitig_746.g26840 Utricularia gibba HOM05D006992 ORTHO05D008752 2.3e-47 193.0 141 63.8
Aqoxy5G00680 Aquilegia oxysepala HOM05D006992 ORTHO05D008752 4.0e-47 192.2 188 52.1
C03p41330 Brassica napus HOM05D003164 ORTHO05D003575 5.2e-47 191.8 185 51.4
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 2.2e-45 186.4 161 57.8
SEGI_08689 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 1.0e-42 177.6 188 49.5
Lj7A478T92 Lonicera japonica HOM05D006992 ORTHO05D008752 2.5e-41 172.9 265 38.1
Haze_04310 Corylus avellana HOM05D006992 ORTHO05D008752 2.1e-40 169.9 289 38.1
Glyma.03G244000 Glycine max HOM05D006992 ORTHO05D008752 3.1e-36 156.0 155 51.6
VMungo0540G1333 Vigna mungo HOM05D006992 ORTHO05D008752 9.1e-36 154.5 149 51.0
Ca_30169_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 3.5e-35 152.5 151 50.3
Gohir.D11G266700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 9.5e-33 144.4 147 50.3
PSO210G4341 Papaver somniferum HOM05D006992 ORTHO05D008752 1.8e-31 140.2 162 47.5
PSO339G2351 Papaver somniferum HOM05D006992 ORTHO05D008752 5.2e-31 138.7 162 46.3
PSO384G0024 Papaver somniferum HOM05D006992 ORTHO05D008752 8.9e-31 137.9 177 44.6
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 3.7e-29 132.5 95 67.4
SEGI_13740 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 7.0e-28 128.3 135 48.1
Gohir.D03G094700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.5e-25 120.6 92 57.6
Gohir.D07G141600 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.4e-20 103.2 78 60.3
SMO361G0250 Selaginella moellendorffii HOM05D006992 ORTHO05D008752 3.2e-20 102.8 167 41.3
Gorai.001G169400 Gossypium raimondii HOM05D006992 ORTHO05D008752 5.4e-20 102.1 78 59.0
Aa31LG5G15340 Aethionema arabicum HOM05D006992 ORTHO05D008752 7.0e-20 101.7 76 60.5
Gohir.D12G044200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.0e-18 97.8 78 56.4
FAN05G0951 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.1e-17 94.4 133 42.9
RcHm_v2.0_Chr3g0452521 Rosa chinensis HOM05D006992 ORTHO05D008752 1.4e-12 77.4 85 49.4
RcHm_v2.0_Chr1g0321781 Rosa chinensis HOM05D006992 ORTHO05D008752 3.5e-11 72.8 61 55.7
RcHm_v2.0_Chr6g0246461 Rosa chinensis HOM05D006992 ORTHO05D008752 1.0e-10 71.2 61 54.1
Gohir.D03G082200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.7e-10 70.5 54 59.3
VMungo0331G0785 Vigna mungo HOM05D006992 ORTHO05D008752 1.9e-09 67.0 80 42.5
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 7.5e-06 55.1 39 61.5


User provided reference genes

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