Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017955 Vanilla planifolia HOM05D000147 ORTHO05D005950 5.8e-71 270.8 136 100.0
Hma1.2p1_0298F.1_g117450 Hydrangea macrophylla HOM05D000147 ORTHO05D005950 4.5e-23 111.7 140 44.3
CDE07G0653 Ceratophyllum demersum HOM05D000147 ORTHO05D005950 5.9e-23 111.3 150 44.0
Nn1g07278 Nelumbo nucifera HOM05D000147 ORTHO05D005950 5.9e-23 111.3 154 42.2
Lj1C1236T15 Lonicera japonica HOM05D000147 ORTHO05D005950 1.3e-22 110.2 146 43.8
CSS0044927 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D005950 3.8e-22 108.6 146 42.5
TAR627G0645 Trochodendron aralioides HOM05D000147 ORTHO05D005950 5.0e-22 108.2 161 41.0
TAR627G0320 Trochodendron aralioides HOM05D000147 ORTHO05D005950 6.5e-22 107.8 161 40.4
Peaxi162Scf00294g00916 Petunia axillaris HOM05D000070 ORTHO05D005950 8.5e-22 107.5 139 44.6
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 1.1e-21 107.1 131 45.8
HanXRQChr15g0470791 Helianthus annuus HOM05D000147 ORTHO05D005950 1.1e-21 107.1 157 40.1
Migut.M01369 Erythranthe guttata HOM05D000147 ORTHO05D005950 2.5e-21 105.9 130 45.4
ECA236G4610 Erigeron canadensis HOM05D002056 ORTHO05D005950 3.2e-21 105.5 152 40.1
Lj6g0003893 Lotus japonicus HOM05D000147 ORTHO05D005950 3.2e-21 105.5 161 39.8
MBI02_g15375_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D005950 3.2e-21 105.5 152 44.1
CAN.G23.7 Capsicum annuum HOM05D000070 ORTHO05D005950 5.5e-21 104.8 159 39.6
Cc09_g01170 Coffea canephora HOM05D000070 ORTHO05D005950 7.2e-21 104.4 137 43.1
Nitab4.5_0005882g0020 Nicotiana tabacum HOM05D000147 ORTHO05D005950 7.2e-21 104.4 139 43.2
Phvul.006G145500 Phaseolus vulgaris HOM05D000147 ORTHO05D005950 7.2e-21 104.4 169 39.1
Thecc.06G228500 Theobroma cacao HOM05D000147 ORTHO05D005950 7.2e-21 104.4 134 44.0
Medtr2g024440 Medicago truncatula HOM05D000147 ORTHO05D005950 9.4e-21 104.0 131 44.3
Potri.004G004000 Populus trichocarpa HOM05D000147 ORTHO05D005950 9.4e-21 104.0 166 38.6
Duzib160G0363 Durio zibethinus HOM05D002056 ORTHO05D005950 1.2e-20 103.6 134 44.0
Gohir.D06G157500 Gossypium hirsutum HOM05D000070 ORTHO05D005950 1.2e-20 103.6 141 41.8
Gorai.010G184000 Gossypium raimondii HOM05D000147 ORTHO05D005950 1.2e-20 103.6 141 41.8
Nitab4.5_0000005g0030 Nicotiana tabacum HOM05D000070 ORTHO05D005950 1.2e-20 103.6 139 43.2
Ciclev10014675m.g Citrus clementina HOM05D000147 ORTHO05D005950 1.6e-20 103.2 141 40.4
THA.LOC104813427 Tarenaya hassleriana HOM05D000147 ORTHO05D005950 1.6e-20 103.2 143 43.4
DCAR_024984 Daucus carota HOM05D000147 ORTHO05D005950 2.1e-20 102.8 137 42.3
Rhsim13G0150000 Rhododendron simsii HOM05D000147 ORTHO05D005950 2.1e-20 102.8 147 41.5
TPR.G13001 Trifolium pratense HOM05D000147 ORTHO05D005950 2.1e-20 102.8 151 41.1
Aqoxy1G02947 Aquilegia oxysepala HOM05D000147 ORTHO05D005950 2.7e-20 102.4 154 41.6
Lalb_Chr15g0087801 Lupinus albus HOM05D000147 ORTHO05D005950 2.7e-20 102.4 161 38.5
Oeu002750.1 Olea europaea HOM05D000070 ORTHO05D005950 2.7e-20 102.4 139 41.7
PSO675G5655 Papaver somniferum HOM05D000147 ORTHO05D005950 2.7e-20 102.4 144 41.7
SGA_v2.0_scaffold7G03784 Striga asiatica HOM05D000070 ORTHO05D005950 2.7e-20 102.4 134 43.3
vmacro03663 Vaccinium macrocarpon HOM05D000147 ORTHO05D005950 2.7e-20 102.4 147 41.5
Glyma.15G112100 Glycine max HOM05D000147 ORTHO05D005950 3.6e-20 102.1 149 41.6
Gohir.A06G151300 Gossypium hirsutum HOM05D000070 ORTHO05D005950 3.6e-20 102.1 131 44.3
PGSC0003DMG402021461 Solanum tuberosum HOM05D000070 ORTHO05D005950 3.6e-20 102.1 142 41.5
Lsat_1_v5_gn_7_14900 Lactuca sativa HOM05D000147 ORTHO05D005950 4.6e-20 101.7 123 46.3
Solyc02g036330.3 Solanum lycopersicum HOM05D000070 ORTHO05D005950 4.6e-20 101.7 142 40.8
Sopen02g011700 Solanum pennellii HOM05D000070 ORTHO05D005950 4.6e-20 101.7 142 41.5
Cfa000159 Carpinus fangiana HOM05D000147 ORTHO05D005950 6.1e-20 101.3 131 44.3
SalBow8G0879 Salvia bowleyana HOM05D000070 ORTHO05D005950 6.1e-20 101.3 134 42.5
GSVIVG01004814001 Vitis vinifera HOM05D000147 ORTHO05D005950 6.1e-20 101.3 154 38.3
GSVIVG01004817001 Vitis vinifera HOM05D000070 ORTHO05D005950 6.1e-20 101.3 154 38.3
Atru.chr10.2285 Acer truncatum HOM05D000147 ORTHO05D005950 7.9e-20 100.9 134 42.5
Os02g0740300 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D005950 7.9e-20 100.9 130 44.6
ATR1149G150 Amborella trichopoda HOM05D000147 ORTHO05D005950 1.0e-19 100.5 166 36.7
Duzib235G0285 Durio zibethinus HOM05D000070 ORTHO05D005950 1.0e-19 100.5 134 41.8
FAN14G4662 Fragaria x ananassa HOM05D000147 ORTHO05D005950 1.0e-19 100.5 132 43.2
Psat1g178560 Pisum sativum HOM05D000147 ORTHO05D005950 1.0e-19 100.5 151 39.1
FAN05G0232 Fragaria x ananassa HOM05D000147 ORTHO05D005950 1.4e-19 100.1 132 43.2
FAN05G2764 Fragaria x ananassa HOM05D000070 ORTHO05D005950 1.4e-19 100.1 132 43.2
arahy.Tifrunner.gnm1.ann1.0743V5 Arachis hypogaea HOM05D000147 ORTHO05D005950 1.8e-19 99.8 151 39.7
arahy.Tifrunner.gnm1.ann1.D0808P Arachis hypogaea HOM05D000147 ORTHO05D005950 1.8e-19 99.8 151 39.7
PSO541G0930 Papaver somniferum HOM05D000147 ORTHO05D005950 1.8e-19 99.8 144 41.0
Sabra04G0002200 Salix brachista HOM05D000147 ORTHO05D005950 1.8e-19 99.8 146 41.8
VMungo0540G1662 Vigna mungo HOM05D000147 ORTHO05D005950 1.8e-19 99.8 149 40.9
MSTRG.7181 Avicennia marina HOM05D000070 ORTHO05D005950 2.3e-19 99.4 134 42.5
Hund23430 Selenicereus undatus HOM05D000147 ORTHO05D005950 2.3e-19 99.4 130 45.4
AL6G47800 Arabidopsis lyrata HOM05D000070 ORTHO05D005950 3.9e-19 98.6 155 41.3
TWI38G0618 Tripterygium wilfordii HOM05D000147 ORTHO05D005950 3.9e-19 98.6 130 43.1
PGR042G1740 Punica granatum HOM05D000147 ORTHO05D005950 5.1e-19 98.2 131 43.5
Carub.0006s3209 Capsella rubella HOM05D000147 ORTHO05D005950 6.7e-19 97.8 154 42.2
Eucgr.E03984 Eucalyptus grandis HOM05D000147 ORTHO05D005950 6.7e-19 97.8 134 43.3
CsaV3_6G048710 Cucumis sativus L. HOM05D000070 ORTHO05D005950 8.8e-19 97.4 134 40.3
CANSAT56G0204 Cannabis sativa HOM05D000070 ORTHO05D005950 1.1e-18 97.1 129 42.6
CiPaw.09G098300 Carya illinoinensis HOM05D000147 ORTHO05D005950 1.1e-18 97.1 131 43.5
Thhalv10028536m.g Eutrema salsugineum HOM05D000070 ORTHO05D005950 1.1e-18 97.1 162 38.9
Sed0005764 Sechium edule HOM05D000147 ORTHO05D005950 1.1e-18 97.1 134 41.0
MD10G1327000 Malus domestica HOM05D000147 ORTHO05D005950 1.5e-18 96.7 152 39.5
AT4G04180 Arabidopsis thaliana HOM05D000147 ORTHO05D005950 1.9e-18 96.3 155 40.6
FAN21G3947 Fragaria x ananassa HOM05D000147 ORTHO05D005950 2.5e-18 95.9 132 43.2
Prupe.4G015000 Prunus persica HOM05D000147 ORTHO05D005950 2.5e-18 95.9 144 40.3
FAN09G4350 Fragaria x ananassa HOM05D000001 ORTHO05D005950 3.3e-18 95.5 127 42.5
A09p26440 Brassica napus HOM05D000147 ORTHO05D005950 4.3e-18 95.1 163 38.0
FvH4_3g01380 Fragaria vesca HOM05D000147 ORTHO05D005950 4.3e-18 95.1 130 43.8
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 5.7e-18 94.7 122 44.3
RcHm_v2.0_Chr5g0002011 Rosa chinensis HOM05D000147 ORTHO05D005950 5.7e-18 94.7 132 41.7
BcaC04g21279 Brassica carinata HOM05D000147 ORTHO05D005950 7.4e-18 94.4 163 38.0
BraA09t38218Z Brassica rapa HOM05D000147 ORTHO05D005950 7.4e-18 94.4 164 37.8
Manes.16G002800 Manihot esculenta HOM05D000147 ORTHO05D005950 7.4e-18 94.4 131 42.0
BcaB01g01796 Brassica carinata HOM05D000147 ORTHO05D005950 9.7e-18 94.0 165 37.6
CiPaw.10G074700 Carya illinoinensis HOM05D000147 ORTHO05D005950 9.7e-18 94.0 132 43.2
QL05p071825 Quercus lobata HOM05D000147 ORTHO05D005950 1.3e-17 93.6 138 40.6
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 1.7e-17 93.2 155 39.4
EL10Ac8g20131 Beta vulgaris HOM05D000147 ORTHO05D005950 1.7e-17 93.2 133 40.6
C09p33620 Brassica napus HOM05D000147 ORTHO05D005950 4.8e-17 91.7 163 37.4
BolC9t56196H Brassica oleracea HOM05D000147 ORTHO05D005950 4.8e-17 91.7 163 37.4
unitig_748.g7944 Utricularia gibba HOM05D000070 ORTHO05D005950 4.8e-17 91.7 129 41.1
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 6.3e-17 91.3 133 39.1
AUR62021899 Chenopodium quinoa HOM05D000147 ORTHO05D005950 8.2e-17 90.9 144 38.2
RcHm_v2.0_Chr5g0002081 Rosa chinensis HOM05D000147 ORTHO05D005950 1.8e-16 89.7 125 42.4
AUR62012759 Chenopodium quinoa HOM05D000147 ORTHO05D005950 3.1e-16 89.0 144 36.8
Mapoly0087s0007 Marchantia polymorpha HOM05D000147 ORTHO05D005950 5.3e-16 88.2 130 37.7
Prupe.4G014800 Prunus persica HOM05D000147 ORTHO05D005950 1.5e-15 86.7 144 36.8
SMO358G0508 Selaginella moellendorffii HOM05D000147 ORTHO05D005950 1.5e-15 86.7 137 38.7
Actinidia26885 Actinidia chinensis HOM05D000147 ORTHO05D005950 5.0e-14 81.6 102 46.1
Cre17.g726150 Chlamydomonas reinhardtii HOM05D000147 ORTHO05D005950 9.4e-13 77.4 132 37.9
ClCG01G021650 Citrullus lanatus HOM05D000070 ORTHO05D005950 3.6e-12 75.5 134 36.6
Haze_06859 Corylus avellana HOM05D000147 ORTHO05D005950 6.1e-12 74.7 131 38.2
Cpa.g.c34179.1 Carica papaya HOM05D000147 ORTHO05D005950 1.4e-11 73.6 69 49.3
Sp6g04620 Schrenkiella parvula HOM05D000070 ORTHO05D005950 8.8e-11 70.9 153 34.6
MELO3C007419.2 Cucumis melo HOM05D000147 ORTHO05D005950 3.3e-10 68.9 97 40.2
SEGI_33320 Sequoiadendron giganteum HOM05D000147 ORTHO05D005950 2.2e-09 66.2 57 54.4
A01p24870 Brassica napus HOM05D000147 ORTHO05D005950 3.1e-08 62.4 56 57.1
MCO05G586 Micromonas commoda HOM05D000070 ORTHO05D005950 4.1e-08 62.0 100 37.0
Actinidia02343 Actinidia chinensis HOM05D000070 ORTHO05D005950 2.0e-07 59.7 36 77.8
AUR62018072 Chenopodium quinoa HOM05D000070 ORTHO05D005950 2.0e-07 59.7 91 39.6
Ca_00695_v3 Cicer arietinum L. HOM05D000147 ORTHO05D005950 5.9e-07 58.2 56 53.6
FAN14G3006 Fragaria x ananassa HOM05D004082 ORTHO05D004729 5.9e-07 58.2 36 75.0
SEGI_14167 Sequoiadendron giganteum HOM05D000147 ORTHO05D005950 7.7e-07 57.8 36 75.0
arahy.Tifrunner.gnm1.ann1.ANFI92 Arachis hypogaea HOM05D012042 ORTHO05D018491 1.0e-06 57.4 36 72.2
Pp3c15_4440 Physcomitrium patens HOM05D000147 ORTHO05D005950 1.0e-06 57.4 36 69.4
Cpa.g.c41002 Carica papaya HOM05D000147 ORTHO05D005950 3.8e-06 55.5 32 84.4
Zm00001eb254090 Zea mays HOM05D000070 ORTHO05D005950 3.8e-06 55.5 35 71.4


User provided reference genes

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