Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 4.7e-149 531.2 267 100.0
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 1.9e-110 402.9 264 75.8
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 7.5e-107 391.0 266 74.1
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 1.7e-106 389.8 266 74.1
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 2.9e-106 389.0 266 73.3
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 3.7e-106 388.7 266 74.1
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.9e-105 386.3 266 74.1
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.4e-105 386.0 266 74.1
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 3.2e-105 385.6 266 72.9
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 3.2e-105 385.6 266 73.3
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 7.0e-105 384.4 266 73.3
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 3.5e-104 382.1 264 73.9
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 3.5e-104 382.1 265 72.1
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 4.6e-104 381.7 266 72.6
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 7.8e-104 380.9 265 73.2
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 1.7e-103 379.8 266 73.7
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 2.3e-103 379.4 266 72.9
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 3.0e-103 379.0 266 73.7
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 3.0e-103 379.0 266 72.9
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 3.9e-103 378.6 266 72.2
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 1.1e-102 377.1 266 72.6
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.5e-102 376.7 265 71.7
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 1.5e-102 376.7 266 72.2
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 1.5e-102 376.7 266 73.3
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.5e-102 376.7 266 71.4
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 1.9e-102 376.3 266 73.7
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 2.5e-102 375.9 265 72.1
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.5e-102 375.9 268 71.6
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.3e-102 375.6 266 71.4
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 5.6e-102 374.8 265 72.1
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 7.3e-102 374.4 266 71.4
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 7.3e-102 374.4 265 73.2
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 9.5e-102 374.0 266 72.9
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 9.5e-102 374.0 265 72.5
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.2e-101 373.6 253 75.5
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 1.6e-101 373.2 266 72.2
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 2.1e-101 372.9 265 69.8
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 2.8e-101 372.5 266 73.3
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 2.8e-101 372.5 265 72.1
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 4.7e-101 371.7 266 71.4
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 8.1e-101 370.9 266 71.4
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 8.1e-101 370.9 266 71.4
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 3.1e-100 369.0 267 71.9
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 5.2e-100 368.2 264 70.8
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 6.8e-100 367.9 265 70.6
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 6.8e-100 367.9 265 70.6
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 8.9e-100 367.5 267 71.5
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.2e-99 367.1 265 70.2
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 1.2e-99 367.1 261 71.6
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 2.0e-99 366.3 266 70.7
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 2.6e-99 365.9 269 72.1
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 3.4e-99 365.5 265 69.8
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 4.4e-99 365.2 265 70.9
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 5.8e-99 364.8 267 71.5
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 7.5e-99 364.4 264 70.8
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 9.8e-99 364.0 265 70.9
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 9.8e-99 364.0 265 70.6
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 9.8e-99 364.0 273 70.7
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 9.8e-99 364.0 266 70.3
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 1.3e-98 363.6 266 68.8
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.2e-98 362.8 262 69.8
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 2.9e-98 362.5 266 71.1
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 3.7e-98 362.1 267 70.8
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 6.4e-98 361.3 265 70.2
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 6.4e-98 361.3 266 69.9
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 6.4e-98 361.3 265 69.8
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 6.4e-98 361.3 256 71.5
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 8.3e-98 360.9 266 69.5
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 8.3e-98 360.9 251 73.3
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 8.3e-98 360.9 267 71.2
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 1.1e-97 360.5 261 69.0
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 1.4e-97 360.1 252 73.4
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 1.9e-97 359.8 265 69.1
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 3.2e-97 359.0 274 70.1
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 5.4e-97 358.2 268 71.3
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 7.1e-97 357.8 263 71.1
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 7.1e-97 357.8 265 69.1
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 9.2e-97 357.5 265 69.1
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.2e-96 357.1 266 69.2
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 3.5e-96 355.5 265 69.8
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 7.8e-96 354.4 257 71.2
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 1.3e-95 353.6 263 69.2
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 1.3e-95 353.6 265 69.1
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.7e-95 353.2 265 69.4
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 3.9e-95 352.1 265 69.8
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 6.6e-95 351.3 251 70.5
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 4.3e-94 348.6 259 69.5
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 4.3e-94 348.6 259 69.5
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 7.3e-94 347.8 252 71.0
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 9.5e-94 347.4 268 69.0
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 1.2e-93 347.1 264 68.9
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 1.6e-93 346.7 259 70.3
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 3.6e-93 345.5 250 70.0
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 3.6e-93 345.5 267 70.4
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 6.2e-93 344.7 267 68.9
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 1.1e-92 344.0 259 69.9
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 3.1e-92 342.4 267 67.8
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 4.0e-92 342.0 265 66.8
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 1.2e-91 340.5 281 65.5
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 1.2e-91 340.5 256 69.1
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 1.2e-91 340.5 266 66.9
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 2.6e-91 339.3 256 69.9
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 4.4e-91 338.6 257 70.0
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 4.4e-91 338.6 265 65.7
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 7.6e-91 337.8 286 63.3
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 9.9e-91 337.4 270 67.8
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 1.4e-89 333.6 251 68.5
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.4e-89 332.8 263 65.8
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 9.2e-89 330.9 237 70.5
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 1.2e-88 330.5 305 59.7
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 1.2e-88 330.5 289 64.0
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 4.6e-88 328.6 318 58.5
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 2.3e-87 326.2 250 70.8
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 5.6e-86 321.6 267 63.7
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 2.1e-85 319.7 273 63.7
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 8.1e-85 317.8 263 62.4
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 2.4e-84 316.2 255 67.1
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 3.1e-84 315.8 266 63.5
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 3.1e-84 315.8 263 62.0
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 3.1e-84 315.8 228 71.5
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 5.8e-83 311.6 263 62.4
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 7.6e-83 311.2 263 62.0
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 9.9e-83 310.8 263 62.0
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 1.3e-82 310.5 263 64.3
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 1.7e-82 310.1 263 61.6
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 2.9e-82 309.3 263 62.0
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 2.9e-82 309.3 255 65.9
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 3.8e-82 308.9 263 61.6
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 6.4e-82 308.1 265 61.1
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 6.4e-82 308.1 263 61.2
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 6.4e-82 308.1 263 61.2
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 1.9e-81 306.6 237 67.9
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 7.1e-81 304.7 263 61.2
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 9.3e-81 304.3 263 61.2
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 1.6e-80 303.5 263 61.2
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 4.6e-80 302.0 263 61.6
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 3.0e-79 299.3 282 57.8
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 1.1e-78 297.4 244 63.5
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 4.3e-78 295.4 211 73.5
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 5.8e-75 285.0 264 58.7
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 5.8e-75 285.0 265 58.1
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 2.4e-73 279.6 264 58.0
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 4.2e-73 278.9 203 71.9
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 3.5e-72 275.8 242 62.8
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 4.6e-72 275.4 202 70.3
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 7.9e-72 274.6 264 58.0
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 7.9e-72 274.6 263 57.4
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 2.5e-70 269.6 264 57.2
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 4.3e-70 268.9 264 57.2
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 7.1e-65 251.5 191 70.7
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.8e-63 246.9 145 84.1
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.4e-52 210.7 171 61.4
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 1.4e-44 184.1 270 44.4
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 1.4e-41 174.1 226 48.7
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 2.3e-39 166.8 166 53.0
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 2.0e-35 153.7 243 41.6
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.3e-29 134.4 94 73.4
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-29 133.3 211 42.7
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 7.0e-28 128.6 121 54.5
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.2e-26 123.6 75 86.7
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 1.1e-25 121.3 107 58.9
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 4.7e-24 115.9 77 75.3
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 1.5e-22 110.9 172 44.2
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 9.1e-20 101.7 117 44.4
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 6.5e-10 68.9 142 34.5
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.1e-09 68.2 41 73.2
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.5e-09 67.0 48 66.7
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 4.2e-09 66.2 105 43.8
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 4.7e-08 62.8 41 65.9
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 6.1e-08 62.4 77 45.5
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 5.2e-07 59.3 43 55.8
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 8.8e-07 58.5 87 34.5


User provided reference genes

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