Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017798 Vanilla planifolia HOM05D005558 ORTHO05D006832 2.1e-117 425.6 207 100.0
Nn6g31548 Nelumbo nucifera HOM05D005558 ORTHO05D006832 1.4e-68 263.5 138 83.3
MSTRG.24533 Avicennia marina HOM05D005558 ORTHO05D006832 2.4e-68 262.7 154 80.5
Potri.002G001500 Populus trichocarpa HOM05D005558 ORTHO05D006832 4.1e-68 261.9 155 78.7
TWI12G1391 Tripterygium wilfordii HOM05D005558 ORTHO05D006832 4.1e-68 261.9 157 77.7
Glyma.07G221200 Glycine max HOM05D005558 ORTHO05D006832 5.3e-68 261.5 138 84.8
Cc10_g00070 Coffea canephora HOM05D005558 ORTHO05D006832 1.6e-67 260.0 140 85.0
Lj4g0004166 Lotus japonicus HOM05D005558 ORTHO05D006832 1.6e-67 260.0 138 84.1
Gohir.A05G177400 Gossypium hirsutum HOM05D005558 ORTHO05D006832 2.0e-67 259.6 164 76.8
Gorai.009G185800 Gossypium raimondii HOM05D005558 ORTHO05D006832 2.0e-67 259.6 164 76.8
Cfa014170 Carpinus fangiana HOM05D005558 ORTHO05D006832 3.5e-67 258.8 152 75.7
Thecc.08G097300 Theobroma cacao HOM05D005558 ORTHO05D006832 7.7e-67 257.7 175 74.3
COL.COLO4_12262 Corchorus olitorius HOM05D005558 ORTHO05D006832 1.0e-66 257.3 171 73.1
Gohir.D05G180800 Gossypium hirsutum HOM05D005558 ORTHO05D006832 1.0e-66 257.3 171 74.3
Lalb_Chr05g0219661 Lupinus albus HOM05D005558 ORTHO05D006832 1.0e-66 257.3 140 82.1
QL02p016334 Quercus lobata HOM05D005558 ORTHO05D006832 1.0e-66 257.3 149 76.5
Ca_18758_v3 Cicer arietinum L. HOM05D005558 ORTHO05D006832 1.3e-66 256.9 148 77.0
CSS0024776 Camellia sinensis var. sinensis HOM05D005558 ORTHO05D006832 1.7e-66 256.5 141 80.1
Nitab4.5_0003423g0040 Nicotiana tabacum HOM05D005558 ORTHO05D006832 1.7e-66 256.5 166 74.1
PSO170G6225 Papaver somniferum HOM05D005558 ORTHO05D006832 2.2e-66 256.1 149 77.2
Solyc12g095770.2 Solanum lycopersicum HOM05D005558 ORTHO05D006832 2.2e-66 256.1 166 74.7
Sopen12g031670 Solanum pennellii HOM05D005558 ORTHO05D006832 2.9e-66 255.8 166 74.7
PGSC0003DMG400029397 Solanum tuberosum HOM05D005558 ORTHO05D006832 2.9e-66 255.8 143 81.8
PSO017G1036 Papaver somniferum HOM05D005558 ORTHO05D006832 3.8e-66 255.4 149 77.2
Phvul.002G097800 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 3.8e-66 255.4 138 82.6
Migut.N03003 Erythranthe guttata HOM05D005558 ORTHO05D006832 5.0e-66 255.0 154 77.3
arahy.Tifrunner.gnm1.ann1.8D2970 Arachis hypogaea HOM05D005558 ORTHO05D006832 6.5e-66 254.6 145 79.3
arahy.Tifrunner.gnm1.ann1.GVHP98 Arachis hypogaea HOM05D005558 ORTHO05D006832 6.5e-66 254.6 145 79.3
CiPaw.08G079200 Carya illinoinensis HOM05D005558 ORTHO05D006832 6.5e-66 254.6 159 72.3
Manes.18G000600 Manihot esculenta HOM05D005558 ORTHO05D006832 6.5e-66 254.6 190 66.3
GSVIVG01013466001 Vitis vinifera HOM05D005558 ORTHO05D006832 6.5e-66 254.6 145 79.3
Hma1.2p1_0914F.1_g236230 Hydrangea macrophylla HOM05D005558 ORTHO05D006832 8.5e-66 254.2 151 74.8
PGR083G0867 Punica granatum HOM05D005558 ORTHO05D006832 8.5e-66 254.2 178 70.2
CAN.G208.43 Capsicum annuum HOM05D005558 ORTHO05D006832 1.9e-65 253.1 155 76.8
RcHm_v2.0_Chr7g0217691 Rosa chinensis HOM05D005558 ORTHO05D006832 2.5e-65 252.7 151 75.5
EL10Ac7g17248 Beta vulgaris HOM05D005558 ORTHO05D006832 3.2e-65 252.3 178 69.1
ATR0605G185 Amborella trichopoda HOM05D005558 ORTHO05D006832 4.2e-65 251.9 182 68.1
HPP92_021698 Vanilla planifolia HOM05D005558 ORTHO05D006832 4.2e-65 251.9 140 77.9
Zm00001eb387340 Zea mays HOM05D005558 ORTHO05D006832 4.2e-65 251.9 153 73.9
ClCG11G019260 Citrullus lanatus HOM05D005558 ORTHO05D006832 5.5e-65 251.5 160 72.5
MD07G1016000 Malus domestica HOM05D005558 ORTHO05D006832 5.5e-65 251.5 138 79.7
TPR.G20977 Trifolium pratense HOM05D005558 ORTHO05D006832 5.5e-65 251.5 146 78.1
Zm00001eb234660 Zea mays HOM05D005558 ORTHO05D006832 5.5e-65 251.5 138 81.2
CsaV3_4G037850 Cucumis sativus L. HOM05D005558 ORTHO05D006832 7.2e-65 251.1 160 72.5
Psat7g129880 Pisum sativum HOM05D005558 ORTHO05D006832 7.2e-65 251.1 138 80.4
Sc17g0004140 Simmondsia chinensis HOM05D005558 ORTHO05D006832 1.2e-64 250.4 143 79.0
Aqoxy5G00965 Aquilegia oxysepala HOM05D005558 ORTHO05D006832 1.6e-64 250.0 174 67.2
arahy.Tifrunner.gnm1.ann1.09GV4T Arachis hypogaea HOM05D005558 ORTHO05D006832 1.6e-64 250.0 166 72.3
arahy.Tifrunner.gnm1.ann1.H4MLSW Arachis hypogaea HOM05D005558 ORTHO05D006832 1.6e-64 250.0 166 72.3
Medtr4g084120 Medicago truncatula HOM05D005558 ORTHO05D006832 1.6e-64 250.0 138 80.4
Os02g0187500 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 1.6e-64 250.0 138 81.2
Ah.08g212310 Amaranthus hybridus HOM05D005558 ORTHO05D006832 2.7e-64 249.2 168 69.0
BcaB07g32099 Brassica carinata HOM05D005558 ORTHO05D006832 2.7e-64 249.2 159 73.0
Hund05339 Selenicereus undatus HOM05D005558 ORTHO05D006832 3.6e-64 248.8 190 63.2
Lsat_1_v5_gn_2_2740 Lactuca sativa HOM05D005558 ORTHO05D006832 8.0e-64 247.7 190 65.3
BcaB03g12837 Brassica carinata HOM05D005558 ORTHO05D006832 1.4e-63 246.9 152 75.7
Lalb_Chr15g0083971 Lupinus albus HOM05D005558 ORTHO05D006832 1.4e-63 246.9 147 74.1
SGA_v2.0_scaffold19G08925 Striga asiatica HOM05D005558 ORTHO05D006832 1.4e-63 246.9 150 77.3
BraA06t24816Z Brassica rapa HOM05D005558 ORTHO05D006832 1.8e-63 246.5 160 71.9
CANSAT25G0089 Cannabis sativa HOM05D005558 ORTHO05D006832 1.8e-63 246.5 177 67.8
Prupe.5G000800 Prunus persica HOM05D005558 ORTHO05D006832 1.8e-63 246.5 169 68.0
A06p17130 Brassica napus HOM05D005558 ORTHO05D006832 2.3e-63 246.1 159 72.3
CiPaw.07G129900 Carya illinoinensis HOM05D005558 ORTHO05D006832 2.3e-63 246.1 183 66.1
FAN04G1408 Fragaria x ananassa HOM05D005558 ORTHO05D006832 3.0e-63 245.7 174 67.8
BcaC05g26014 Brassica carinata HOM05D005558 ORTHO05D006832 4.0e-63 245.4 163 70.6
Glyma.15G161100 Glycine max HOM05D005558 ORTHO05D006832 5.2e-63 245.0 153 72.5
MD06G1057400 Malus domestica HOM05D005558 ORTHO05D006832 5.2e-63 245.0 138 78.3
Carub.0001s2052 Capsella rubella HOM05D005558 ORTHO05D006832 6.7e-63 244.6 191 64.9
Duzib116G0928 Durio zibethinus HOM05D005558 ORTHO05D006832 1.2e-62 243.8 179 66.5
FvH4_5g26780 Fragaria vesca HOM05D005558 ORTHO05D006832 1.2e-62 243.8 173 66.5
FAN18G4437 Fragaria x ananassa HOM05D005558 ORTHO05D006832 1.2e-62 243.8 173 66.5
THA.LOC104813721 Tarenaya hassleriana HOM05D005558 ORTHO05D006832 1.2e-62 243.8 162 71.6
AT1G21065 Arabidopsis thaliana HOM05D005558 ORTHO05D006832 2.0e-62 243.0 147 73.5
BcaC07g39074 Brassica carinata HOM05D005558 ORTHO05D006832 2.0e-62 243.0 152 74.3
BolC8t49687H Brassica oleracea HOM05D005558 ORTHO05D006832 2.0e-62 243.0 152 74.3
FAN08G1374 Fragaria x ananassa HOM05D005558 ORTHO05D006832 2.0e-62 243.0 174 67.8
A08p29100 Brassica napus HOM05D005558 ORTHO05D006832 2.6e-62 242.7 152 74.3
BraA08t34846Z Brassica rapa HOM05D005558 ORTHO05D006832 2.6e-62 242.7 152 74.3
CARHR021510 Cardamine hirsuta HOM05D005558 ORTHO05D006832 2.6e-62 242.7 191 64.4
Eucgr.F01955 Eucalyptus grandis HOM05D005558 ORTHO05D006832 2.6e-62 242.7 204 60.8
Peaxi162Scf00064g01430 Petunia axillaris HOM05D005558 ORTHO05D006832 4.4e-62 241.9 166 72.3
Sp1g18730 Schrenkiella parvula HOM05D005558 ORTHO05D006832 4.4e-62 241.9 168 68.5
Mapoly0002s0034 Marchantia polymorpha HOM05D005558 ORTHO05D006832 7.5e-62 241.1 139 74.8
AL1G34110 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 1.3e-61 240.4 190 64.2
SMO259G0018 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 8.2e-61 237.7 138 74.6
Thhalv10008709m.g Eutrema salsugineum HOM05D005558 ORTHO05D006832 4.1e-60 235.3 192 63.5
SEGI_40156 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 9.1e-60 234.2 157 69.4
Rhsim06G0000500 Rhododendron simsii HOM05D005558 ORTHO05D006832 2.0e-59 233.0 226 55.8
Pp3c1_31360 Physcomitrium patens HOM05D005558 ORTHO05D006832 1.3e-58 230.3 140 72.1
Sabra02G0001000 Salix brachista HOM05D005558 ORTHO05D006832 5.5e-57 224.9 161 68.9
Nitab4.5_0001309g0160 Nicotiana tabacum HOM05D005558 ORTHO05D006832 3.0e-55 219.2 124 80.6
AUR62041000 Chenopodium quinoa HOM05D005558 ORTHO05D006832 6.8e-55 218.0 161 65.2
Ciclev10002303m.g Citrus clementina HOM05D005558 ORTHO05D006832 6.8e-55 218.0 123 81.3
TAR381G1539 Trochodendron aralioides HOM05D005558 ORTHO05D006832 8.8e-55 217.6 162 67.3
ECA238G0376 Erigeron canadensis HOM05D005558 ORTHO05D006832 1.2e-54 217.2 122 81.1
Atru.chr13.17 Acer truncatum HOM05D005558 ORTHO05D006832 7.5e-54 214.5 152 71.1
Cre17.g739300 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 9.8e-54 214.2 140 67.9
HanXRQChr14g0427511 Helianthus annuus HOM05D005558 ORTHO05D006832 1.3e-53 213.8 141 73.8
Actinidia15539 Actinidia chinensis HOM05D005558 ORTHO05D006832 2.2e-53 213.0 123 78.9
C08p20580 Brassica napus HOM05D005558 ORTHO05D006832 2.4e-52 209.5 134 73.9
MELO3C017079.2 Cucumis melo HOM05D005558 ORTHO05D006832 7.0e-52 208.0 115 80.9
Sed0017561 Sechium edule HOM05D005558 ORTHO05D006832 5.9e-51 204.9 135 70.4
BolC5t30678H Brassica oleracea HOM05D000370 ORTHO05D006832 5.0e-50 201.8 134 67.9
Lj4C814G4 Lonicera japonica HOM05D005558 ORTHO05D006832 6.5e-50 201.4 163 61.3
VMungo0251G0776 Vigna mungo HOM05D005558 ORTHO05D006832 2.8e-48 196.1 104 85.6
SGA_v2.0_scaffold25G11031 Striga asiatica HOM05D005558 ORTHO05D006832 8.0e-48 194.5 177 62.1
Phvul.009G240200 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 2.0e-46 189.9 133 67.7
Prupe.5G000700 Prunus persica HOM05D005558 ORTHO05D006832 4.4e-46 188.7 116 72.4
Dinv05517 Davidia involucrata HOM05D005558 ORTHO05D006832 1.7e-45 186.8 156 61.5
Os06g0638200 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 4.1e-44 182.2 94 85.1
SMO203G0115 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 2.5e-41 172.9 145 53.8
Pp3c2_25680 Physcomitrium patens HOM05D005558 ORTHO05D006832 1.2e-40 170.6 151 53.6
SEGI_39286 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 3.0e-39 166.0 150 54.0
Mapoly0065s0101 Marchantia polymorpha HOM05D005558 ORTHO05D006832 6.4e-37 158.3 195 45.1
Peaxi162Scf00064g01422 Petunia axillaris HOM05D005558 ORTHO05D006832 1.1e-36 157.5 123 62.6
Cre01.g043100 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 1.6e-35 153.7 174 44.8
Haze_22894 Corylus avellana HOM05D005558 ORTHO05D006832 6.0e-35 151.8 152 48.0
Oeu000735.2 Olea europaea HOM05D005558 ORTHO05D006832 6.0e-35 151.8 98 74.5
TAR376G0283 Trochodendron aralioides HOM05D005558 ORTHO05D006832 3.0e-34 149.4 86 76.7
vmacro21735 Vaccinium macrocarpon HOM05D005558 ORTHO05D006832 1.1e-33 147.5 91 73.6
Cfa023908 Carpinus fangiana HOM05D005558 ORTHO05D006832 1.1e-31 141.0 172 41.3
CDE04G3086 Ceratophyllum demersum HOM05D000433 ORTHO05D000443 1.4e-31 140.6 202 41.6
SalBow6G6347 Salvia bowleyana HOM05D005558 ORTHO05D006832 7.5e-30 134.8 167 44.9
CBR_g570 Chara braunii HOM05D005558 ORTHO05D006832 4.9e-29 132.1 85 67.1
MCO09G054 Micromonas commoda HOM05D005558 ORTHO05D006832 7.8e-27 124.8 149 46.3
AL8G17720 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 3.6e-24 115.9 72 73.6
HPP92_021704 Vanilla planifolia HOM05D005558 ORTHO05D006832 3.4e-22 109.4 118 46.6
C05p19780 Brassica napus HOM05D005558 ORTHO05D006832 7.5e-22 108.2 55 81.8
AL5G16180 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 2.9e-21 106.3 70 70.0
BcaC07g39073 Brassica carinata HOM05D005558 ORTHO05D006832 1.5e-17 94.0 49 81.6
Aa31LG7G5210 Aethionema arabicum HOM05D005558 ORTHO05D006832 1.3e-13 80.9 154 34.4
AagrBONN_evm.TU.Sc2ySwM_344.2923 Anthoceros agrestis HOM05D005558 ORTHO05D006832 1.1e-12 77.8 74 50.0
Cpa.g.sc36.93 Carica papaya HOM05D005558 ORTHO05D006832 8.7e-10 68.2 31 90.3
Cre09.g396850 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D034498 1.2e-08 64.3 192 29.7
PRCOL_00001425 Prasinoderma coloniale HOM05D005558 ORTHO05D006832 2.1e-08 63.5 94 37.2
DCAR_022964 Daucus carota HOM05D005558 ORTHO05D006832 1.2e-06 57.8 44 59.1
Cpa.g.sc36.94 Carica papaya HOM05D005558 ORTHO05D006832 5.8e-06 55.5 118 32.2


User provided reference genes

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