Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 0.0e+00 1176.0 688 100.0
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 1.0e-94 352.1 398 52.5
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 5.7e-90 336.3 555 43.2
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 8.5e-86 322.4 719 42.6
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 9.4e-85 318.9 666 38.0
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 2.1e-84 317.8 413 49.4
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.0e-83 315.5 612 40.5
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 1.0e-83 315.5 424 47.2
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.4e-83 315.1 612 40.5
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 6.7e-83 312.8 407 47.4
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 1.1e-82 312.0 465 44.7
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 2.0e-82 311.2 423 45.9
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 2.5e-82 310.8 756 37.2
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 1.7e-81 308.1 408 47.3
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 3.7e-81 307.0 436 45.4
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 1.8e-80 304.7 418 45.7
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 2.4e-80 304.3 393 48.6
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 2.4e-80 304.3 441 45.6
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 3.1e-80 303.9 429 46.9
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 4.1e-80 303.5 424 45.5
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 4.1e-80 303.5 431 47.1
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 1.5e-79 301.6 404 47.5
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 1.5e-79 301.6 438 47.5
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 2.0e-79 301.2 436 46.1
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 3.4e-79 300.4 436 46.3
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 4.5e-79 300.1 430 45.1
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 4.5e-79 300.1 428 45.8
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 2.9e-78 297.4 755 36.0
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 1.4e-77 295.0 384 48.2
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.4e-77 295.0 438 43.6
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 2.5e-77 294.3 440 45.7
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 3.2e-77 293.9 666 35.6
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 5.5e-77 293.1 405 45.9
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 7.2e-77 292.7 418 45.5
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 9.4e-77 292.4 427 43.1
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 9.4e-77 292.4 372 47.0
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 1.2e-76 292.0 680 34.9
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 1.6e-76 291.6 429 44.1
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 2.1e-76 291.2 606 36.1
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.1e-76 291.2 437 44.6
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 3.6e-76 290.4 439 43.7
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 3.0e-75 287.3 661 34.8
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 3.0e-75 287.3 416 45.2
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 3.9e-75 287.0 410 44.9
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 3.9e-75 287.0 661 34.6
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 5.1e-75 286.6 576 42.0
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 5.1e-75 286.6 427 42.9
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 8.8e-75 285.8 434 43.8
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.5e-74 285.0 574 41.1
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 2.0e-74 284.6 428 43.0
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 2.6e-74 284.3 566 39.0
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 9.7e-74 282.3 418 44.0
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 1.7e-73 281.6 439 43.5
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 2.8e-73 280.8 399 46.1
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 2.8e-73 280.8 696 36.9
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 3.7e-73 280.4 665 37.6
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 8.2e-73 279.3 682 37.2
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.4e-72 278.5 679 37.0
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 1.4e-72 278.5 802 34.3
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 1.8e-72 278.1 335 48.1
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 2.4e-72 277.7 706 38.8
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 4.1e-72 276.9 374 47.9
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 9.1e-72 275.8 387 42.9
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 1.2e-71 275.4 408 45.3
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 2.0e-71 274.6 374 45.5
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 2.0e-71 274.6 359 46.2
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 3.5e-71 273.9 380 44.7
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 1.0e-70 272.3 731 35.3
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 1.7e-70 271.6 451 43.0
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 1.7e-70 271.6 357 47.1
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 2.9e-70 270.8 724 36.3
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 1.5e-69 268.5 360 46.9
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 1.5e-69 268.5 406 42.6
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 1.9e-69 268.1 422 43.1
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 1.9e-69 268.1 396 43.9
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 7.2e-69 266.2 388 45.9
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 9.4e-69 265.8 676 37.0
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 1.6e-68 265.0 554 37.5
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 1.6e-68 265.0 394 42.6
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 2.1e-68 264.6 396 42.7
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 1.4e-67 261.9 347 47.3
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 2.3e-67 261.2 372 45.7
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 2.3e-67 261.2 360 46.1
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 3.0e-67 260.8 691 37.3
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 5.2e-67 260.0 369 43.9
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 1.1e-66 258.8 394 40.9
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 7.4e-66 256.1 634 36.8
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 1.3e-65 255.4 397 45.1
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 3.1e-64 250.8 381 43.3
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 7.0e-64 249.6 371 45.0
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 1.2e-60 238.8 390 43.1
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 1.8e-59 235.0 398 40.2
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.3e-54 218.8 654 35.6
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 2.2e-54 218.0 655 36.0
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 3.1e-48 197.6 364 40.9
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 2.7e-47 194.5 302 45.0
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 8.9e-43 179.5 620 30.2
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 8.9e-43 179.5 620 30.2
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.6e-36 158.7 373 36.7
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 1.4e-32 145.6 336 35.7
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 2.4e-32 144.8 332 35.5
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 3.0e-30 137.9 236 41.1
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 7.3e-29 133.3 147 50.3
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 8.3e-25 119.8 168 43.5
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 8.6e-22 109.8 125 48.8
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 1.5e-13 82.4 183 39.3
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 3.4e-10 71.2 129 40.3
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 1.7e-09 68.9 124 39.5
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.9e-09 68.2 94 47.9
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 3.2e-08 64.7 112 42.9


User provided reference genes

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