Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.6e-100 369.4 184 100.0
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 1.6e-15 87.0 97 47.4
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 7.9e-15 84.7 90 47.8
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 7.9e-15 84.7 88 48.9
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 1.0e-14 84.3 115 41.7
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 1.4e-14 84.0 101 44.6
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 3.9e-14 82.4 144 36.1
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 3.9e-14 82.4 95 48.4
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 1.1e-13 80.9 117 38.5
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.5e-13 80.5 101 41.6
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 2.0e-13 80.1 95 46.3
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 2.6e-13 79.7 98 45.9
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 2.6e-13 79.7 102 44.1
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 3.3e-13 79.3 104 43.3
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 3.3e-13 79.3 99 43.4
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 4.4e-13 79.0 109 42.2
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 4.4e-13 79.0 145 37.9
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 4.4e-13 79.0 84 46.4
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 4.4e-13 79.0 84 46.4
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 4.4e-13 79.0 134 38.1
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 5.7e-13 78.6 98 44.9
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 9.7e-13 77.8 109 43.1
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.7e-12 77.0 112 43.8
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.8e-12 76.3 96 44.8
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 6.3e-12 75.1 85 48.2
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.1e-11 74.3 83 49.4
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.1e-11 74.3 83 49.4
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 1.1e-11 74.3 150 36.7
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 1.1e-11 74.3 85 44.7
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.4e-11 73.9 100 44.0
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 3.1e-11 72.8 102 40.2
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 3.1e-11 72.8 121 37.2
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 4.1e-11 72.4 107 42.1
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 4.1e-11 72.4 89 44.9
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 5.3e-11 72.0 150 36.7
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 7.0e-11 71.6 83 48.2
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 7.0e-11 71.6 72 51.4
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 9.1e-11 71.2 184 32.6
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 1.2e-10 70.9 133 36.1
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 1.6e-10 70.5 107 41.1
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 2.0e-10 70.1 83 45.8
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 2.0e-10 70.1 117 40.2
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 2.0e-10 70.1 101 42.6
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 2.0e-10 70.1 61 55.7
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 2.6e-10 69.7 128 39.1
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 2.6e-10 69.7 159 34.0
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.6e-10 69.7 98 42.9
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 3.5e-10 69.3 101 44.6
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 3.5e-10 69.3 83 47.0
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 4.5e-10 68.9 94 43.6
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 4.5e-10 68.9 98 41.8
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 7.7e-10 68.2 88 46.6
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 7.7e-10 68.2 106 36.8
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 7.7e-10 68.2 106 36.8
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 7.7e-10 68.2 130 33.1
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 7.7e-10 68.2 109 40.4
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.0e-09 67.8 122 34.4
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 1.0e-09 67.8 122 34.4
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 1.7e-09 67.0 102 45.1
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.7e-09 67.0 127 37.0
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 2.2e-09 66.6 99 38.4
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 2.9e-09 66.2 102 39.2
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 2.9e-09 66.2 126 36.5
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 3.8e-09 65.9 88 44.3
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 3.8e-09 65.9 84 44.0
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 5.0e-09 65.5 98 41.8
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 5.0e-09 65.5 124 36.3
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 6.5e-09 65.1 84 42.9
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 1.9e-08 63.5 93 43.0
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 2.5e-08 63.2 86 43.0
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 2.5e-08 63.2 104 37.5
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 3.2e-08 62.8 84 42.9
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 5.5e-08 62.0 88 42.0
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 5.5e-08 62.0 83 41.0
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 5.5e-08 62.0 106 35.8
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 7.2e-08 61.6 83 41.0
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 7.2e-08 61.6 106 34.9
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 9.4e-08 61.2 132 32.6
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 9.4e-08 61.2 83 42.2
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 9.4e-08 61.2 72 47.2
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.2e-07 60.8 86 47.7
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.6e-07 60.5 105 41.9
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 2.1e-07 60.1 99 38.4
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 6.1e-07 58.5 86 40.7
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 8.0e-07 58.2 83 39.8
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 8.0e-07 58.2 83 39.8
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 1.0e-06 57.8 79 40.5
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 1.8e-06 57.0 177 31.1
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 3.0e-06 56.2 85 38.8
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 6.7e-06 55.1 135 35.6
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 8.8e-06 54.7 82 39.0


User provided reference genes

Program Settings